ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl42c03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CP17A_BOVIN (P05185) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVI... 32 0.93
2VATH_YEAST (P41807) Vacuolar ATP synthase subunit H (EC 3.6.3.14... 29 4.6
3CBL_MLVCN (P23092) Transforming protein cbl 29 4.6
4CBL_HUMAN (P22681) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) ... 29 4.6
5CBL_MOUSE (P22682) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) ... 29 4.6
6YL289_MIMIV (Q5UPX1) Putative ankyrin repeat protein L289 29 4.6
7NOS2B_HUMAN (P81272) Nitric-oxide synthase IIB (EC 1.14.13.39) (... 29 6.0
8NOS2A_HUMAN (P35228) Nitric oxide synthase, inducible (EC 1.14.1... 28 7.9

>CP17A_BOVIN (P05185) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVII) (P450-C17)|
           (P450c17) (Steroid 17-alpha-hydroxylase/17,20 lyase)
          Length = 509

 Score = 31.6 bits (70), Expect = 0.93
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = -1

Query: 292 NITEGKM-IMFMEAASSVKPILEKRP*KEMVETGGCVTMRNLASENALTRCSVTLYTDAT 116
           N+ +G + ++  E    + P+L+  P K M +  GCV  RN      L +C     +D+ 
Sbjct: 200 NVNDGILEVLSKEVLLDIFPVLKIFPSKAMEKMKGCVQTRNELLNEILEKCQENFSSDSI 259

Query: 115 NILLKKLL 92
             LL  L+
Sbjct: 260 TNLLHILI 267



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>VATH_YEAST (P41807) Vacuolar ATP synthase subunit H (EC 3.6.3.14) (V-ATPase H|
           subunit) (Vacuolar proton pump H subunit) (V-ATPase 54
           kDa subunit)
          Length = 478

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 127 CIMLQSSE*VHFRMQDFSWLHSRQFLPSLFRV 222
           CI L     V    +D  WLH ++F+P+LF++
Sbjct: 186 CIRLLQELAVIPEYRDVIWLHEKKFMPTLFKI 217



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>CBL_MLVCN (P23092) Transforming protein cbl|
          Length = 390

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
 Frame = +3

Query: 108 RMLVASVYNVTEQRVSAFSDARFLMV---TQPPVSTISFQGLFSRMGFTELAASMNMIIF 278
           R+ + ++   T+Q +S F + +  M    +QP  +      +FS M   EL       IF
Sbjct: 146 RVFMENLMKKTKQTISLFKEGKERMYEENSQPRRNLTKLSLIFSHM-LAELKG-----IF 199

Query: 279 PSVMFQKEQRNTRRICSGNPGRHSFRRRSLH*WSSHAEAL 398
           PS +FQ +     +  +    R +F  +++  W S  +AL
Sbjct: 200 PSGLFQGDTFRITKADAAEFWRKAFGEKTIVPWKSFRQAL 239



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>CBL_HUMAN (P22681) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal|
           transduction protein CBL) (Proto-oncogene c-CBL)
           (Casitas B-lineage lymphoma proto-oncogene) (RING finger
           protein 55)
          Length = 906

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
 Frame = +3

Query: 108 RMLVASVYNVTEQRVSAFSDARFLMV---TQPPVSTISFQGLFSRMGFTELAASMNMIIF 278
           R+ + ++   T+Q +S F + +  M    +QP  +      +FS M   EL       IF
Sbjct: 116 RVFMENLMKKTKQTISLFKEGKERMYEENSQPRRNLTKLSLIFSHM-LAELKG-----IF 169

Query: 279 PSVMFQKEQRNTRRICSGNPGRHSFRRRSLH*WSSHAEAL 398
           PS +FQ +     +  +    R +F  +++  W S  +AL
Sbjct: 170 PSGLFQGDTFRITKADAAEFWRKAFGEKTIVPWKSFRQAL 209



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>CBL_MOUSE (P22682) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal|
           transduction protein CBL) (Proto-oncogene c-CBL)
           (Casitas B-lineage lymphoma proto-oncogene)
          Length = 913

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
 Frame = +3

Query: 108 RMLVASVYNVTEQRVSAFSDARFLMV---TQPPVSTISFQGLFSRMGFTELAASMNMIIF 278
           R+ + ++   T+Q +S F + +  M    +QP  +      +FS M   EL       IF
Sbjct: 114 RVFMENLMKKTKQTISLFKEGKERMYEENSQPRRNLTKLSLIFSHM-LAELKG-----IF 167

Query: 279 PSVMFQKEQRNTRRICSGNPGRHSFRRRSLH*WSSHAEAL 398
           PS +FQ +     +  +    R +F  +++  W S  +AL
Sbjct: 168 PSGLFQGDTFRITKADAAEFWRKAFGEKTIVPWKSFRQAL 207



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>YL289_MIMIV (Q5UPX1) Putative ankyrin repeat protein L289|
          Length = 544

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = -1

Query: 256 AASSVKPILEKRP*KEMVETGGCVTMRNLASENALTRCSVTLYTDATNILLKKLL 92
           AAS+VK     +  K ++  G  +  +NL   + L  C +  YT + N+ + KLL
Sbjct: 118 AASNVKYASNIKTIKLLIHYGADINHKNLLGVSVLHYCYIDYYTKSDNLEVIKLL 172



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>NOS2B_HUMAN (P81272) Nitric-oxide synthase IIB (EC 1.14.13.39) (NOS type II B)|
           (NOSIIb) (Fragments)
          Length = 79

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 14  PGQDHYYPPEMLQRAARGVLQDKP 85
           P +DH Y  EML+ A +GVL   P
Sbjct: 45  PNEDHIYQEEMLEMARKGVLPAVP 68



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>NOS2A_HUMAN (P35228) Nitric oxide synthase, inducible (EC 1.14.13.39) (NOS type|
            II) (Inducible NO synthase) (Inducible NOS) (iNOS)
            (Hepatocyte NOS) (HEP-NOS)
          Length = 1153

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 11   KPGQDHYYPPEMLQRAARGVL 73
            +P +DH Y  EML+ A +GVL
Sbjct: 1018 RPDEDHIYQEEMLEMAQKGVL 1038


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,372,645
Number of Sequences: 219361
Number of extensions: 1461797
Number of successful extensions: 4140
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4139
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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