Clone Name | rbastl42c03 |
---|---|
Clone Library Name | barley_pub |
>CP17A_BOVIN (P05185) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVII) (P450-C17)| (P450c17) (Steroid 17-alpha-hydroxylase/17,20 lyase) Length = 509 Score = 31.6 bits (70), Expect = 0.93 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Frame = -1 Query: 292 NITEGKM-IMFMEAASSVKPILEKRP*KEMVETGGCVTMRNLASENALTRCSVTLYTDAT 116 N+ +G + ++ E + P+L+ P K M + GCV RN L +C +D+ Sbjct: 200 NVNDGILEVLSKEVLLDIFPVLKIFPSKAMEKMKGCVQTRNELLNEILEKCQENFSSDSI 259 Query: 115 NILLKKLL 92 LL L+ Sbjct: 260 TNLLHILI 267
>VATH_YEAST (P41807) Vacuolar ATP synthase subunit H (EC 3.6.3.14) (V-ATPase H| subunit) (Vacuolar proton pump H subunit) (V-ATPase 54 kDa subunit) Length = 478 Score = 29.3 bits (64), Expect = 4.6 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = +1 Query: 127 CIMLQSSE*VHFRMQDFSWLHSRQFLPSLFRV 222 CI L V +D WLH ++F+P+LF++ Sbjct: 186 CIRLLQELAVIPEYRDVIWLHEKKFMPTLFKI 217
>CBL_MLVCN (P23092) Transforming protein cbl| Length = 390 Score = 29.3 bits (64), Expect = 4.6 Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 3/100 (3%) Frame = +3 Query: 108 RMLVASVYNVTEQRVSAFSDARFLMV---TQPPVSTISFQGLFSRMGFTELAASMNMIIF 278 R+ + ++ T+Q +S F + + M +QP + +FS M EL IF Sbjct: 146 RVFMENLMKKTKQTISLFKEGKERMYEENSQPRRNLTKLSLIFSHM-LAELKG-----IF 199 Query: 279 PSVMFQKEQRNTRRICSGNPGRHSFRRRSLH*WSSHAEAL 398 PS +FQ + + + R +F +++ W S +AL Sbjct: 200 PSGLFQGDTFRITKADAAEFWRKAFGEKTIVPWKSFRQAL 239
>CBL_HUMAN (P22681) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal| transduction protein CBL) (Proto-oncogene c-CBL) (Casitas B-lineage lymphoma proto-oncogene) (RING finger protein 55) Length = 906 Score = 29.3 bits (64), Expect = 4.6 Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 3/100 (3%) Frame = +3 Query: 108 RMLVASVYNVTEQRVSAFSDARFLMV---TQPPVSTISFQGLFSRMGFTELAASMNMIIF 278 R+ + ++ T+Q +S F + + M +QP + +FS M EL IF Sbjct: 116 RVFMENLMKKTKQTISLFKEGKERMYEENSQPRRNLTKLSLIFSHM-LAELKG-----IF 169 Query: 279 PSVMFQKEQRNTRRICSGNPGRHSFRRRSLH*WSSHAEAL 398 PS +FQ + + + R +F +++ W S +AL Sbjct: 170 PSGLFQGDTFRITKADAAEFWRKAFGEKTIVPWKSFRQAL 209
>CBL_MOUSE (P22682) E3 ubiquitin-protein ligase CBL (EC 6.3.2.-) (Signal| transduction protein CBL) (Proto-oncogene c-CBL) (Casitas B-lineage lymphoma proto-oncogene) Length = 913 Score = 29.3 bits (64), Expect = 4.6 Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 3/100 (3%) Frame = +3 Query: 108 RMLVASVYNVTEQRVSAFSDARFLMV---TQPPVSTISFQGLFSRMGFTELAASMNMIIF 278 R+ + ++ T+Q +S F + + M +QP + +FS M EL IF Sbjct: 114 RVFMENLMKKTKQTISLFKEGKERMYEENSQPRRNLTKLSLIFSHM-LAELKG-----IF 167 Query: 279 PSVMFQKEQRNTRRICSGNPGRHSFRRRSLH*WSSHAEAL 398 PS +FQ + + + R +F +++ W S +AL Sbjct: 168 PSGLFQGDTFRITKADAAEFWRKAFGEKTIVPWKSFRQAL 207
>YL289_MIMIV (Q5UPX1) Putative ankyrin repeat protein L289| Length = 544 Score = 29.3 bits (64), Expect = 4.6 Identities = 17/55 (30%), Positives = 28/55 (50%) Frame = -1 Query: 256 AASSVKPILEKRP*KEMVETGGCVTMRNLASENALTRCSVTLYTDATNILLKKLL 92 AAS+VK + K ++ G + +NL + L C + YT + N+ + KLL Sbjct: 118 AASNVKYASNIKTIKLLIHYGADINHKNLLGVSVLHYCYIDYYTKSDNLEVIKLL 172
>NOS2B_HUMAN (P81272) Nitric-oxide synthase IIB (EC 1.14.13.39) (NOS type II B)| (NOSIIb) (Fragments) Length = 79 Score = 28.9 bits (63), Expect = 6.0 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +2 Query: 14 PGQDHYYPPEMLQRAARGVLQDKP 85 P +DH Y EML+ A +GVL P Sbjct: 45 PNEDHIYQEEMLEMARKGVLPAVP 68
>NOS2A_HUMAN (P35228) Nitric oxide synthase, inducible (EC 1.14.13.39) (NOS type| II) (Inducible NO synthase) (Inducible NOS) (iNOS) (Hepatocyte NOS) (HEP-NOS) Length = 1153 Score = 28.5 bits (62), Expect = 7.9 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = +2 Query: 11 KPGQDHYYPPEMLQRAARGVL 73 +P +DH Y EML+ A +GVL Sbjct: 1018 RPDEDHIYQEEMLEMAQKGVL 1038 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,372,645 Number of Sequences: 219361 Number of extensions: 1461797 Number of successful extensions: 4140 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 4027 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4139 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2677159704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)