>emb|AL646001.7| Mouse DNA sequence from clone RP23-10B17 on chromosome 11 Contains the
             5' end of a variant of the Odz2 gene for odd Oz/ten-m
             homolog 2 (Drosophila), complete sequence
          Length = 194171

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 262   atatgtaaacatcaaaagaaaaaccc 287
             |||||||||||| |||||||||||||
Sbjct: 76066 atatgtaaacataaaaagaaaaaccc 76091

>gb|AC122486.4| Mus musculus BAC clone RP24-380B9 from 12, complete sequence
          Length = 128253

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 262    atatgtaaacatcaaaagaaaa 283
              ||||||||||||||||||||||
Sbjct: 102188 atatgtaaacatcaaaagaaaa 102209

>gb|AC170805.2| Mus musculus BAC clone RP24-363B14 from chromosome 16, complete
             sequence
          Length = 149317

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 112   gcaacaatttgaataacaaaa 132
             |||||||||||||||||||||
Sbjct: 50246 gcaacaatttgaataacaaaa 50266

>gb|AC103388.6| Mus musculus chromosome 7, clone RP24-403B15, complete sequence
          Length = 164394

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 154   aaattacacccaaaatatcacacat 178
             |||||||||||||||| ||||||||
Sbjct: 41148 aaattacacccaaaatttcacacat 41124

>gb|AC012596.4| Homo sapiens BAC clone CTD-2523K17 from 7, complete sequence
          Length = 154859

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 114    aacaatttgaataacaaaaca 134
              |||||||||||||||||||||
Sbjct: 137464 aacaatttgaataacaaaaca 137484

>ref|XM_394589.2| PREDICTED: Apis mellifera similar to ENSANGP00000002826 (LOC411115),
            mRNA
          Length = 17253

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 142  ctgattttgttaaaattacac 162
            |||||||||||||||||||||
Sbjct: 2330 ctgattttgttaaaattacac 2350

>emb|BX255954.13| Zebrafish DNA sequence from clone CH211-275D2 in linkage group 20,
             complete sequence
          Length = 164972

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 11    atggctcacattcggtattaa 31
             |||||||||||||||||||||
Sbjct: 51894 atggctcacattcggtattaa 51874

>gb|AC163644.4| Mus musculus BAC clone RP24-394I24 from chromosome 16, complete
            sequence
          Length = 177627

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 112  gcaacaatttgaataacaaaa 132
            |||||||||||||||||||||
Sbjct: 3852 gcaacaatttgaataacaaaa 3832

>gb|AC111093.10| Mus musculus chromosome 3, clone RP23-170E22, complete sequence
          Length = 201202

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   aatttgaataacaaaacaca 136
             ||||||||||||||||||||
Sbjct: 59891 aatttgaataacaaaacaca 59910

>gb|AC167129.5| Mus musculus chromosome 5, clone RP23-397D16, complete sequence
          Length = 197551

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   ccattcaaaataccacaaat 222
             ||||||||||||||||||||
Sbjct: 29805 ccattcaaaataccacaaat 29786

>gb|AY458639.1| Uncultured bacterium 442 clone EBAC000-63A02 genomic sequence
          Length = 91075

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   cacacgagtctgattttgtt 152
             ||||||||||||||||||||
Sbjct: 10182 cacacgagtctgattttgtt 10163

>emb|CR955005.2| Medicago truncatula chromosome 5 clone mte1-58c24, COMPLETE SEQUENCE
          Length = 106497

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    tgttgtgacaatttacatgc 75
             ||||||||||||||||||||
Sbjct: 53431 tgttgtgacaatttacatgc 53450

>gb|AC113064.8| Mus musculus chromosome 5, clone RP23-262H7, complete sequence
          Length = 176176

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    ccattcaaaataccacaaat 222
              ||||||||||||||||||||
Sbjct: 133828 ccattcaaaataccacaaat 133809

>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome
          Length = 2799802

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 82      tggctgcaacaatttgaataacat 105
               |||||||||||||||| |||||||
Sbjct: 1949048 tggctgcaacaatttgcataacat 1949025

>gb|AC123900.2| Homo sapiens chromosome 3 clone RP11-640D6, complete sequence
          Length = 166485

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 109    gctgcaacaatttgaataacaaaa 132
              |||| |||||||||||||||||||
Sbjct: 120111 gctggaacaatttgaataacaaaa 120134

>gb|AC044784.11| Homo sapiens chromosome 10 clone RP11-428L9, complete sequence
          Length = 179711

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 109   gctgcaacaatttgaataacaaaa 132
             |||| |||||||||||||||||||
Sbjct: 66555 gctggaacaatttgaataacaaaa 66578

>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome
          Length = 2878529

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 82      tggctgcaacaatttgaataacat 105
               |||||||||||||||| |||||||
Sbjct: 2007017 tggctgcaacaatttgcataacat 2006994

>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome
          Length = 2809422

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 82      tggctgcaacaatttgaataacat 105
               |||||||||||||||| |||||||
Sbjct: 1987416 tggctgcaacaatttgcataacat 1987393

>emb|BX322601.9| Zebrafish DNA sequence from clone DKEY-170H8 in linkage group 7, complete
              sequence
          Length = 210153

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 262    atatgtaaacatcaaaagaaaaac 285
              ||||||||||||||||| ||||||
Sbjct: 191496 atatgtaaacatcaaaaaaaaaac 191519

>emb|BX088704.7| Zebrafish DNA sequence from clone CH211-208M6 in linkage group 7,
              complete sequence
          Length = 209042

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 262    atatgtaaacatcaaaagaaaaac 285
              ||||||||||||||||| ||||||
Sbjct: 206527 atatgtaaacatcaaaaaaaaaac 206550

>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome
          Length = 2821361

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 82      tggctgcaacaatttgaataacat 105
               |||||||||||||||| |||||||
Sbjct: 1911822 tggctgcaacaatttgcataacat 1911799

>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome
          Length = 2872769

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 82      tggctgcaacaatttgaataacat 105
               |||||||||||||||| |||||||
Sbjct: 2008062 tggctgcaacaatttgcataacat 2008039

>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2
          Length = 2820462

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 82      tggctgcaacaatttgaataacat 105
               |||||||||||||||| |||||||
Sbjct: 1969801 tggctgcaacaatttgcataacat 1969778

>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome
          Length = 2814816

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 82      tggctgcaacaatttgaataacat 105
               |||||||||||||||| |||||||
Sbjct: 1929222 tggctgcaacaatttgcataacat 1929199

>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome
          Length = 2902619

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 82      tggctgcaacaatttgaataacat 105
               |||||||||||||||| |||||||
Sbjct: 2046732 tggctgcaacaatttgcataacat 2046709

>gb|BC050266.1| Mus musculus polyhomeotic-like 3 (Drosophila), mRNA (cDNA clone
            IMAGE:5362875)
          Length = 4888

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 117  aatttgaataacaaaacaca 136
            ||||||||||||||||||||
Sbjct: 1240 aatttgaataacaaaacaca 1221

>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome
          Length = 2742531

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 82      tggctgcaacaatttgaataacat 105
               |||||||||||||||| |||||||
Sbjct: 1933343 tggctgcaacaatttgcataacat 1933320


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,575,452
Number of Sequences: 3902068
Number of extensions: 3575452
Number of successful extensions: 100837
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100564
Number of HSP's gapped (non-prelim): 273
length of query: 287
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 265
effective length of database: 17,147,199,772
effective search space: 4544007939580
effective search space used: 4544007939580
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)