>COPB_DICDI (Q23924) Probable coatomer subunit beta (Beta-coat protein)|
           (Beta-COP) (Fragment)
          Length = 400

 Score = 45.4 bits (106), Expect = 5e-05
 Identities = 20/28 (71%), Positives = 25/28 (89%)
 Frame = -1

Query: 421 KQVDGKLSGYIRIRSKTQGIALSLGDKI 338
           KQ DGK+SGYIRIR+K Q IA++LG+KI
Sbjct: 366 KQADGKISGYIRIRAKVQSIAVTLGEKI 393

>COPB_DROME (P45437) Coatomer subunit beta (Beta-coat protein) (Beta-COP)|
          Length = 964

 Score = 44.7 bits (104), Expect = 9e-05
 Identities = 20/30 (66%), Positives = 27/30 (90%)
 Frame = -1

Query: 412  DGKLSGYIRIRSKTQGIALSLGDKITLKQK 323
            D K++G+IRIR+K+QG+ALSLGDKI+  QK
Sbjct: 929  DSKVTGHIRIRAKSQGMALSLGDKISSSQK 958

>COPB_RAT (P23514) Coatomer subunit beta (Beta-coat protein) (Beta-COP)|
          Length = 953

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 20/30 (66%), Positives = 26/30 (86%)
 Frame = -1

Query: 412  DGKLSGYIRIRSKTQGIALSLGDKITLKQK 323
            D  ++G+IRIR+K+QG+ALSLGDKI L QK
Sbjct: 920  DAAVTGHIRIRAKSQGMALSLGDKINLSQK 949

>COPB_MOUSE (Q9JIF7) Coatomer subunit beta (Beta-coat protein) (Beta-COP)|
          Length = 953

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 20/30 (66%), Positives = 26/30 (86%)
 Frame = -1

Query: 412  DGKLSGYIRIRSKTQGIALSLGDKITLKQK 323
            D  ++G+IRIR+K+QG+ALSLGDKI L QK
Sbjct: 920  DAAVTGHIRIRAKSQGMALSLGDKINLSQK 949

>COPB_SCHPO (Q9UUF7) Coatomer subunit beta (Beta-coat protein) (Beta-COP)|
          Length = 940

 Score = 41.6 bits (96), Expect = 8e-04
 Identities = 19/25 (76%), Positives = 22/25 (88%)
 Frame = -1

Query: 421 KQVDGKLSGYIRIRSKTQGIALSLG 347
           K V G +SG++RIRSKTQGIALSLG
Sbjct: 913 KSVSGPISGHVRIRSKTQGIALSLG 937

>COPB_HUMAN (P53618) Coatomer subunit beta (Beta-coat protein) (Beta-COP)|
          Length = 953

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 19/30 (63%), Positives = 25/30 (83%)
 Frame = -1

Query: 412  DGKLSGYIRIRSKTQGIALSLGDKITLKQK 323
            D  ++ +IRIR+K+QG+ALSLGDKI L QK
Sbjct: 920  DAAVTVHIRIRAKSQGMALSLGDKINLSQK 949

>COPB_YEAST (P41810) Coatomer subunit beta (Beta-coat protein) (Beta-COP)|
          Length = 973

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = -1

Query: 397  GYIRIRSKTQGIALSLGDKITLKQK 323
            GY+RIRSK QG+ALSLGD++ L  K
Sbjct: 939  GYVRIRSKGQGLALSLGDRVALIAK 963

>INP4A_RAT (Q62784) Type I inositol-3,4-bisphosphate 4-phosphatase (EC|
           3.1.3.66) (Inositol polyphosphate 4-phosphatase type I)
          Length = 939

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +1

Query: 259 LAKWTSYMTQLQQIASQLNCLPSA*G*SCLPS*VQFLG 372
           L +  SY  Q +++  + +CLP +   +CLP  ++FLG
Sbjct: 789 LVRLNSYFEQFKEVLPE-DCLPRSRSQTCLPELLRFLG 825

>INP4A_MOUSE (Q9EPW0) Type I inositol-3,4-bisphosphate 4-phosphatase (EC|
           3.1.3.66) (Inositol polyphosphate 4-phosphatase type I)
          Length = 939

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +1

Query: 223 TSLLAHCTGSMKLAKWTSYMTQLQQIASQLNCLPSA*G*SCLPS*VQFLG 372
           TSL     G   L +  SY  Q +++  + +CLP +   +CLP  ++FLG
Sbjct: 778 TSLQEGINGE-SLVRVNSYFEQFKEVLPE-DCLPRSRSQTCLPELLRFLG 825

>INP4A_HUMAN (Q96PE3) Type I inositol-3,4-bisphosphate 4-phosphatase (EC|
           3.1.3.66) (Inositol polyphosphate 4-phosphatase type I)
          Length = 977

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +1

Query: 259 LAKWTSYMTQLQQIASQLNCLPSA*G*SCLPS*VQFLG 372
           L +  SY  Q +++  + +CLP +   +CLP  ++FLG
Sbjct: 827 LVRLNSYFEQFKEVLPE-DCLPRSRSQTCLPELLRFLG 863


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,084,746
Number of Sequences: 219361
Number of extensions: 991145
Number of successful extensions: 2599
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2599
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)