>MTAL1_KLULA (Q08398) Mating-type protein ALPHA1 (Transcription activator|
           Alpha1p) (MATalpha1 protein)
          Length = 261

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 293 LQTIINTHATSQKYTAQNWLLLTSQFLCGETPK 391
           L TII+ H T  K T +NW L+  ++ C  + K
Sbjct: 129 LSTIISKHWTVDKQTRKNWELIAQEYNCDASGK 161

>MET2_SCHPO (O60062) Homoserine O-acetyltransferase (EC 2.3.1.31) (Homoserine|
           O-trans-acetylase)
          Length = 489

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = +1

Query: 166 HWRRHKNIPFDRRRKKKPCSFPGSSKS*AAVAERPKSMASSFPPNNNQHSCNLAKIYSSK 345
           HW  H     +R R+++PC   GSS +  +    P S  SS P      + + + +  S 
Sbjct: 274 HWVVHNE--GNRNRRERPCRSNGSSPTSESALNSPASSVSSLPSLGASQTTDSSSLNQSS 331

Query: 346 L 348
           L
Sbjct: 332 L 332

>TILS_BUCBP (Q89AX3) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 438

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +3

Query: 24  RLTVISQNNLRFSFRLLQC*HDIL*PTEYSKTTVHCYKLCKN 149
           +L  + +NNL F+FR +   H +   +E  K + HC K+C N
Sbjct: 30  QLLKLKKNNLNFTFRAIHINHQLHPDSE--KWSDHCKKICIN 69

>NU2M_ASTPE (Q33819) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 2)
          Length = 354

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
 Frame = -3

Query: 242 LLEPGNEQGFFFLLLSNGMFLCLLQCYYFFSVLTQFVTMYCG--------FGVFCRLQYI 87
           L+EP N+   F + L+ G+ L L  C+Y+F  + Q V    G           F  L Y+
Sbjct: 86  LMEPLNQATSFLMTLALGLKLGLFPCHYWFPDVIQGVGFIQGLVLSTWQKIAPFAVLVYV 145

Query: 86  VSAL 75
           V +L
Sbjct: 146 VESL 149

>SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precursor (EC|
           3.2.1.-) (Soluble cell wall protein 11)
          Length = 542

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +1

Query: 232 GSSKS*AAVAERPKSMASSFPPNNNQHSCNLAKIYSSKLAV 354
           GSS S AA+   PK++A  + P N+  SC  A   SS L +
Sbjct: 269 GSSSSSAAITSSPKAIA--YSPYNDDGSCKSADAVSSDLTL 307

>CCNB3_MOUSE (Q810T2) G2/mitotic-specific cyclin-B3|
          Length = 1396

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 148  FLHNL*QCTVVLEYSVGYNISCQHCRSRKLN 56
            ++ NL  C   LEY  GY ++  H   RKLN
Sbjct: 1319 YMRNLSNCVPTLEYFTGYKMAELHILVRKLN 1349

>PSTC2_MYCTU (P0A630) Phosphate transport system permease protein pstC-2|
          Length = 324

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = -2

Query: 309 LIIVWRKGRSHGFWSLGDGGLTLAGAWE*TRLFFSSSVKWDVFVSPPMLLFLFS 148
           ++++ R     G WSL DGG T A         FS  +    ++S    LF+ +
Sbjct: 254 VLVILRSAARPGTWSLFDGGYTFASKIASAASEFSEPLPTGAYISAGFALFVLT 307

>PSTC2_MYCBO (P0A631) Phosphate transport system permease protein pstC-2|
          Length = 324

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = -2

Query: 309 LIIVWRKGRSHGFWSLGDGGLTLAGAWE*TRLFFSSSVKWDVFVSPPMLLFLFS 148
           ++++ R     G WSL DGG T A         FS  +    ++S    LF+ +
Sbjct: 254 VLVILRSAARPGTWSLFDGGYTFASKIASAASEFSEPLPTGAYISAGFALFVLT 307

>MLZE_HUMAN (Q9BYG8) Melanoma-derived leucine zipper-containing extranuclear|
           factor
          Length = 508

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +2

Query: 281 LLPFLQTIINT--HATSQKYTAQNWLLLTSQFLCGETPKL*RIH 406
           LLP   TI  T  +A+S     +  L LT QFL G  PK  ++H
Sbjct: 258 LLPSFHTISPTLFNASSNDMKLKPELFLTQQFLSGHLPKYEQVH 301

>AFAD_HUMAN (P55196) Afadin (AF-6 protein)|
          Length = 1816

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 200  EEEKKSLVHSQAPARVRPPSPRDQNP 277
            +E  + L+  +AP   RPP PRD  P
Sbjct: 1652 DEAARRLLEPEAPGLCRPPLPRDYEP 1677

>SEC1_YEAST (P30619) Protein transport protein SEC1|
          Length = 724

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 25/97 (25%), Positives = 42/97 (43%)
 Frame = +2

Query: 56  IQFSTPTMLTRYIVTDRILQNHSTLLQIV*ELKRNNNIGGDTKTSHLTEEEKKSLVHSQA 235
           I  +  T+L+   +T + L N+ T + ++    R        +  ++ E  K ++    A
Sbjct: 30  IDKTVETILSYLFLTPQELLNNVTSVDLIDSPTRKGQ--SSIEAIYILEPTKYNINCIDA 87

Query: 236 PARVRPPSPRDQNPWLLPFLQTIINTHATSQKYTAQN 346
              VRPP  R  +   LP L   I     S++Y AQN
Sbjct: 88  DFMVRPPKYRRCHIRFLPGLTNPIFQFFQSKRYIAQN 124


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,948,650
Number of Sequences: 219361
Number of extensions: 1287113
Number of successful extensions: 3800
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3800
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)