Clone Name | rbastl42b02 |
---|---|
Clone Library Name | barley_pub |
>S23A1_MOUSE (Q9Z2J0) Solute carrier family 23 member 1 (Sodium-dependent| vitamin C transporter 1) (Na(+)/L-ascorbic acid transporter 1) (Yolk sac permease-like molecule 3) Length = 605 Score = 29.6 bits (65), Expect = 3.5 Identities = 9/11 (81%), Positives = 9/11 (81%) Frame = -1 Query: 270 PWIPIPYPCSW 238 PWI IPYPC W Sbjct: 308 PWIRIPYPCQW 318
>S23A1_HUMAN (Q9UHI7) Solute carrier family 23 member 1 (Sodium-dependent| vitamin C transporter 1) (hSVCT1) (Na(+)/L-ascorbic acid transporter 1) (Yolk sac permease-like molecule 3) Length = 598 Score = 29.6 bits (65), Expect = 3.5 Identities = 9/11 (81%), Positives = 9/11 (81%) Frame = -1 Query: 270 PWIPIPYPCSW 238 PWI IPYPC W Sbjct: 301 PWIRIPYPCQW 311
>S23A1_RAT (Q9WTW7) Solute carrier family 23 member 1 (Sodium-dependent| vitamin C transporter 1) (Na(+)/L-ascorbic acid transporter 1) Length = 604 Score = 29.6 bits (65), Expect = 3.5 Identities = 9/11 (81%), Positives = 9/11 (81%) Frame = -1 Query: 270 PWIPIPYPCSW 238 PWI IPYPC W Sbjct: 308 PWIRIPYPCQW 318
>RAMP3_CAVPO (Q8R4C4) Receptor activity-modifying protein 3 precursor| Length = 146 Score = 28.5 bits (62), Expect = 7.7 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Frame = +3 Query: 279 RFVW*LCLCPSTKNICGVNYNRRRLQRVVSRY*EVYRERMHHLL--QWWNLQLYVV 440 + +W L LC + +CG N R L+R + R + + ERM + +W +L ++V Sbjct: 9 QLLWLLLLCGTCARVCGCN-ETRMLER-LPRCGKTFAERMREVAVWKWCDLSQFIV 62
>C1QR1_HUMAN (Q9NPY3) Complement component C1q receptor precursor (Complement| component 1, q subcomponent, receptor 1) (C1qR) (C1qRp) (C1qR(p)) (C1q/MBL/SPA receptor) (CD93 antigen) (CDw93) Length = 652 Score = 28.5 bits (62), Expect = 7.7 Identities = 17/40 (42%), Positives = 22/40 (55%) Frame = -1 Query: 408 GGDASFLCILPSTWRLLAAVFFCYN*RHRCSSCSGKGRVT 289 GGD SFLC +RLL + C + R+ CSS +G T Sbjct: 278 GGDGSFLCGCRPGFRLLDDLVTCAS-RNPCSSSPCRGGAT 316 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,838,520 Number of Sequences: 219361 Number of extensions: 1527493 Number of successful extensions: 4121 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 3971 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4121 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)