>gb|AC158514.2| Mus musculus BAC clone RP24-480D16 from chromosome 12, complete
             sequence
          Length = 204825

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 198   agagagacgcacaaaacagag 218
             |||||||||||||||||||||
Sbjct: 84515 agagagacgcacaaaacagag 84535

>gb|AC147065.2| Pan troglodytes BAC clone RP43-163G7 from 7, complete sequence
          Length = 167103

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 147    cccagcattcctgagcttcca 167
              |||||||||||||||||||||
Sbjct: 130358 cccagcattcctgagcttcca 130378

>gb|AC154903.4| Mus musculus BAC clone RP23-414E24 from chromosome 12, complete
            sequence
          Length = 201338

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 198  agagagacgcacaaaacagag 218
            |||||||||||||||||||||
Sbjct: 8820 agagagacgcacaaaacagag 8800

>gb|AC018647.5| Homo sapiens chromosome 7 clone RP11-379H18, complete sequence
          Length = 160732

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 147    cccagcattcctgagcttcca 167
              |||||||||||||||||||||
Sbjct: 139215 cccagcattcctgagcttcca 139195

>gb|AC068233.11| Homo sapiens chromosome 15, clone RP11-169M2, complete sequence
          Length = 177483

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 145   aacccagcattcctgagcttc 165
             |||||||||||||||||||||
Sbjct: 94469 aacccagcattcctgagcttc 94449

>gb|AC000100.2| Homo sapiens Chromosome 19 BAC Clone 959a10, complete sequence
          Length = 101912

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 209   caaaacagaggcaacgagccagccaaaag 237
             ||||||||||||| ||||| |||||||||
Sbjct: 44542 caaaacagaggcaccgagctagccaaaag 44514

>gb|AC073649.3|AC073649 Homo sapiens clone RP11-823D8, complete sequence
          Length = 120951

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 209    caaaacagaggcaacgagccagccaaaag 237
              ||||||||||||| ||||| |||||||||
Sbjct: 102359 caaaacagaggcaccgagctagccaaaag 102331

>gb|AC010682.3| Homo sapiens BAC clone RP11-251M8 from Y, complete sequence
          Length = 145383

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 209    caaaacagaggcaacgagccagccaaaag 237
              ||||||||||||| ||||| |||||||||
Sbjct: 121766 caaaacagaggcaccgagctagccaaaag 121794

>ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P3 and inverted repeat IR2
               (P1-P2-P3-IR2@) on chromosome Y
          Length = 4538292

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 209     caaaacagaggcaacgagccagccaaaag 237
               ||||||||||||| ||||| |||||||||
Sbjct: 3958563 caaaacagaggcaccgagctagccaaaag 3958591



 Score = 42.1 bits (21), Expect = 0.84
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 209     caaaacagaggcaacgagccagccaaaag 237
               ||||||||||||| ||||| |||||||||
Sbjct: 2089771 caaaacagaggcaccgagctagccaaaag 2089743

>gb|AC132315.4| Mus musculus BAC clone RP24-234J3 from chromosome 12, complete sequence
          Length = 181828

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 154   ttcctgagcttccacttgcatacc 177
             |||||||||||||||| |||||||
Sbjct: 45022 ttcctgagcttccactggcatacc 44999

>emb|AL606693.3|OSJN00109 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0076A11,
             complete sequence
          Length = 127419

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 211   aaacagaggcaacgagccagccaa 234
             |||||||| |||||||||||||||
Sbjct: 89979 aaacagagccaacgagccagccaa 89956

>emb|BX538053.1|HSM806224 Homo sapiens genomic DNA; cDNA DKFZp686L04145 (from clone
            DKFZp686L04145)
          Length = 3770

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   cattgattgcaaaaataaat 38
            ||||||||||||||||||||
Sbjct: 2887 cattgattgcaaaaataaat 2906

>gb|AC107628.4| Homo sapiens chromosome 8, clone CTD1-2009P10, complete sequence
          Length = 102718

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    cattgattgcaaaaataaat 38
             ||||||||||||||||||||
Sbjct: 43071 cattgattgcaaaaataaat 43090

>gb|AY048575.1| Xenopus laevis Pax6 gene, promoter and 5'UTR
          Length = 2603

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 20   attgattgcaaaaataaatt 39
            ||||||||||||||||||||
Sbjct: 1488 attgattgcaaaaataaatt 1507

>gb|AC163744.3| Pan troglodytes BAC clone CH251-376E11 from chromosome unknown, complete
              sequence
          Length = 195342

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     cattgattgcaaaaataaat 38
              ||||||||||||||||||||
Sbjct: 160142 cattgattgcaaaaataaat 160161

>gb|AC175061.3| Pan troglodytes BAC clone CH251-572M8 from chromosome unknown, complete
             sequence
          Length = 191409

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    cattgattgcaaaaataaat 38
             ||||||||||||||||||||
Sbjct: 46979 cattgattgcaaaaataaat 46960

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 211     aaacagaggcaacgagccagccaa 234
               |||||||| |||||||||||||||
Sbjct: 3500684 aaacagagccaacgagccagccaa 3500661

>emb|BX470100.6| Zebrafish DNA sequence from clone DKEY-239K7 in linkage group 18,
             complete sequence
          Length = 117304

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 61    cagacattatttggcagatagctt 84
             |||||||||||||||| |||||||
Sbjct: 61196 cagacattatttggcatatagctt 61173

>dbj|AP005367.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB800C8, complete
              sequence
          Length = 112111

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     cattgattgcaaaaataaat 38
              ||||||||||||||||||||
Sbjct: 104560 cattgattgcaaaaataaat 104541

>gb|AC154237.1| Mus musculus BAC clone RP24-162O18 from 17, complete sequence
          Length = 168481

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 148   ccagcattcctgagcttcca 167
             ||||||||||||||||||||
Sbjct: 62548 ccagcattcctgagcttcca 62529

>dbj|AP004295.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1907E5
          Length = 154597

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    cattgattgcaaaaataaat 38
             ||||||||||||||||||||
Sbjct: 21892 cattgattgcaaaaataaat 21873


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,546,097
Number of Sequences: 3902068
Number of extensions: 2546097
Number of successful extensions: 44421
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44372
Number of HSP's gapped (non-prelim): 49
length of query: 256
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 234
effective length of database: 17,147,199,772
effective search space: 4012444746648
effective search space used: 4012444746648
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)