Clone Name | rbastl42a08 |
---|---|
Clone Library Name | barley_pub |
>gb|AC102686.7| Mus musculus chromosome 1, clone RP24-467J24, complete sequence Length = 156547 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 11 acacttattatatagaaggttca 33 |||||||||||||||||| |||| Sbjct: 84684 acacttattatatagaagattca 84662
>gb|AE006100.1| Pasteurella multocida subsp. multocida str. Pm70 section 67 of 204 of the complete genome Length = 13317 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 29 gttcatgatgcattctaca 47 ||||||||||||||||||| Sbjct: 5080 gttcatgatgcattctaca 5062
>gb|AE006850.1| Sulfolobus solfataricus P2 section 209 of 272 of the complete genome Length = 10755 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 agcattccaacacttatta 20 ||||||||||||||||||| Sbjct: 5635 agcattccaacacttatta 5617
>gb|AC138642.10| Mus musculus chromosome 3, clone RP23-21O7, complete sequence Length = 252108 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 15 ttattatatagaaggttcatgat 37 |||||||||| |||||||||||| Sbjct: 153873 ttattatataaaaggttcatgat 153851
>gb|AC006044.2| Homo sapiens BAC clone RP11-539B24 from 7, complete sequence Length = 141509 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 9 caacacttattatatagaa 27 ||||||||||||||||||| Sbjct: 72053 caacacttattatatagaa 72071
>emb|AL358073.24| Human DNA sequence from clone RP11-458I7 on chromosome 1 Contains the 5' end of the ZA20D1 gene for zinc finger, A20 domain containing 1, a ribosomal protein L6 (RPL6) pseudogene, the VPS45A gene for vacuolar protein sorting 45A (yeast), the gene for CK2 interacting protein 1; HQ0024c protein (CKIP-1), a novel gene and a CpG island, complete sequence Length = 188211 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 5 attccaacacttattatatagaa 27 ||||||| ||||||||||||||| Sbjct: 53879 attccaagacttattatatagaa 53857
>emb|AL162580.20| Human DNA sequence from clone RP11-524A17 on chromosome 6 Contains a novel gene and a protein phosphatase 1 regulatory (inhibitor) subunit 14A (PPP1R14A) pseudogene, complete sequence Length = 171483 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 34 tgatgcattctacaatatg 52 ||||||||||||||||||| Sbjct: 120902 tgatgcattctacaatatg 120920
>gb|AC099525.5| Papio anubis clone RP41-277O17, complete sequence Length = 163567 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 9 caacacttattatatagaa 27 ||||||||||||||||||| Sbjct: 48481 caacacttattatatagaa 48499
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 4 cattccaacacttattata 22 ||||||||||||||||||| Sbjct: 924595 cattccaacacttattata 924577
>gb|AC008674.5| Homo sapiens chromosome 5 clone CTB-43E15, complete sequence Length = 178502 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 36 atgcattctacaatatgct 54 ||||||||||||||||||| Sbjct: 142221 atgcattctacaatatgct 142203
>gb|AC010339.8|AC010339 Homo sapiens chromosome 5 clone CTD-2009A17, complete sequence Length = 122480 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 36 atgcattctacaatatgct 54 ||||||||||||||||||| Sbjct: 32155 atgcattctacaatatgct 32137
>gb|AC020559.4|AC020559 Homo sapiens BAC clone RP11-527F13 from 6, complete sequence Length = 194079 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 34 tgatgcattctacaatatg 52 ||||||||||||||||||| Sbjct: 43269 tgatgcattctacaatatg 43287
>emb|AJ296029.1|SSO296029 Sulfolobus solfataricus celS gene for cellulase Length = 1117 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 agcattccaacacttatta 20 ||||||||||||||||||| Sbjct: 797 agcattccaacacttatta 815
>emb|BX511139.4| Mouse DNA sequence from clone RP24-262M23 on chromosome 11, complete sequence Length = 105948 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 31 tcatgatgcattctacaat 49 ||||||||||||||||||| Sbjct: 27493 tcatgatgcattctacaat 27475 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 733,660 Number of Sequences: 3902068 Number of extensions: 733660 Number of successful extensions: 46279 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 46253 Number of HSP's gapped (non-prelim): 26 length of query: 127 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 106 effective length of database: 17,151,101,840 effective search space: 1818016795040 effective search space used: 1818016795040 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)