>LRTM1_PONPY (Q5R6B1) Leucine-rich repeat transmembrane neuronal protein 1|
           precursor
          Length = 522

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
 Frame = +1

Query: 64  VLGTVLYWQRDVPSRRT-----ACFTLAPSKTKGCKQKAMTETKL 183
           +LG  LYW    PS        ACF + P+   GC Q    E +L
Sbjct: 5   LLGLCLYWLLRRPSGVVLCLLGACFQMLPAAPSGCPQLCRCEGRL 49

>LRTM1_HUMAN (Q86UE6) Leucine-rich repeat transmembrane neuronal protein 1|
           precursor
          Length = 522

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
 Frame = +1

Query: 64  VLGTVLYWQRDVPSRRT-----ACFTLAPSKTKGCKQKAMTETKL 183
           +LG  LYW    PS        ACF + P+   GC Q    E +L
Sbjct: 5   LLGLCLYWLLRRPSGVVLCLLGACFQMLPAAPSGCPQLCRCEGRL 49


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,932,785
Number of Sequences: 219361
Number of extensions: 829452
Number of successful extensions: 1703
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1703
length of database: 80,573,946
effective HSP length: 72
effective length of database: 64,779,954
effective search space used: 1554718896
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)