Clone Name | rbastl42a05 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SPK1_CAEEL (Q03563) Serine/threonine-protein kinase spk-1 (EC 2.... | 29 | 3.6 | 2 | SPK1_CAEBR (Q61IS6) Serine/threonine-protein kinase spk-1 (EC 2.... | 28 | 4.6 |
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>SPK1_CAEEL (Q03563) Serine/threonine-protein kinase spk-1 (EC 2.7.11.1)| Length = 1003 Score = 28.9 bits (63), Expect = 3.6 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Frame = +2 Query: 11 HIFENLPTIMLKIKMPGKSTREIQFLKDEPMLP--KLRKWCRHRMLTKRNEYSHELISGN 184 HI E L I I GK RE F K+ +L +L+ W + +L ++ E+SHE + Sbjct: 819 HISELLGAIPPSIYKKGKHWREF-FHKNGHLLHIHQLKPWSLYEVLRQKYEWSHE----D 873 Query: 185 SQLFQPF 205 +Q F+ F Sbjct: 874 AQQFESF 880
>SPK1_CAEBR (Q61IS6) Serine/threonine-protein kinase spk-1 (EC 2.7.11.1)| Length = 771 Score = 28.5 bits (62), Expect = 4.6 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Frame = +2 Query: 11 HIFENLPTIMLKIKMPGKSTREIQFLKDEPMLP--KLRKWCRHRMLTKRNEYSHELISGN 184 HI E L I I GK RE F K+ +L L+ W + +L ++ E+SHE + Sbjct: 598 HISELLGQISPSIYKKGKHWREF-FHKNGNLLHIHNLKPWSLYEVLRQKYEWSHE----D 652 Query: 185 SQLFQPF 205 +Q F+ F Sbjct: 653 AQQFESF 659 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,909,697 Number of Sequences: 219361 Number of extensions: 745919 Number of successful extensions: 1864 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1845 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1864 length of database: 80,573,946 effective HSP length: 68 effective length of database: 65,657,398 effective search space used: 1575777552 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)