ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl42a05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SPK1_CAEEL (Q03563) Serine/threonine-protein kinase spk-1 (EC 2.... 29 3.6
2SPK1_CAEBR (Q61IS6) Serine/threonine-protein kinase spk-1 (EC 2.... 28 4.6

>SPK1_CAEEL (Q03563) Serine/threonine-protein kinase spk-1 (EC 2.7.11.1)|
          Length = 1003

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
 Frame = +2

Query: 11   HIFENLPTIMLKIKMPGKSTREIQFLKDEPMLP--KLRKWCRHRMLTKRNEYSHELISGN 184
            HI E L  I   I   GK  RE  F K+  +L   +L+ W  + +L ++ E+SHE    +
Sbjct: 819  HISELLGAIPPSIYKKGKHWREF-FHKNGHLLHIHQLKPWSLYEVLRQKYEWSHE----D 873

Query: 185  SQLFQPF 205
            +Q F+ F
Sbjct: 874  AQQFESF 880



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>SPK1_CAEBR (Q61IS6) Serine/threonine-protein kinase spk-1 (EC 2.7.11.1)|
          Length = 771

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = +2

Query: 11  HIFENLPTIMLKIKMPGKSTREIQFLKDEPMLP--KLRKWCRHRMLTKRNEYSHELISGN 184
           HI E L  I   I   GK  RE  F K+  +L    L+ W  + +L ++ E+SHE    +
Sbjct: 598 HISELLGQISPSIYKKGKHWREF-FHKNGNLLHIHNLKPWSLYEVLRQKYEWSHE----D 652

Query: 185 SQLFQPF 205
           +Q F+ F
Sbjct: 653 AQQFESF 659


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,909,697
Number of Sequences: 219361
Number of extensions: 745919
Number of successful extensions: 1864
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1864
length of database: 80,573,946
effective HSP length: 68
effective length of database: 65,657,398
effective search space used: 1575777552
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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