>gb|AC097277.6| Oryza sativa chromosome 3 BAC OSJNBa0022C08 genomic sequence, complete
             sequence
          Length = 150155

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 103   gttaccaaaattgcgcaaatggtgtcgccaccggatg 139
             ||||||||||||| ||||||||||| |||||| ||||
Sbjct: 91956 gttaccaaaattgggcaaatggtgttgccaccagatg 91992

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                     
Query: 103      gttaccaaaattgcgcaaatggtgtcgccaccggatg 139
                ||||||||||||| ||||||||||| |||||| ||||
Sbjct: 27212439 gttaccaaaattgggcaaatggtgttgccaccagatg 27212403

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                     
Query: 103      gttaccaaaattgcgcaaatggtgtcgccaccggatg 139
                ||||||||||||| ||||||||||| |||||| ||||
Sbjct: 27303762 gttaccaaaattgggcaaatggtgttgccaccagatg 27303726

>dbj|AK064988.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001D07, full
            insert sequence
          Length = 3566

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 103  gttaccaaaattgcgcaaatggtgtcgccaccggatg 139
            ||||||||||||| ||||||||||| |||||| ||||
Sbjct: 3519 gttaccaaaattgggcaaatggtgttgccaccagatg 3483

>dbj|AK060749.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F12, full
            insert sequence
          Length = 1817

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 103  gttaccaaaattgcgcaaatggtgtcgccaccggatg 139
            ||||||||||||| ||||||||||| |||||| ||||
Sbjct: 1761 gttaccaaaattgggcaaatggtgttgccaccagatg 1725

>gb|AC110794.3| Homo sapiens BAC clone RP11-598O12 from 4, complete sequence
          Length = 148841

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 154   tgaatattcacatgaactcatt 175
             ||||||||||||||||||||||
Sbjct: 97295 tgaatattcacatgaactcatt 97274

>gb|AC009263.6|AC009263 Homo sapiens clone RP11-377B19 from 7q31.3, complete sequence
          Length = 182502

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 8     taacatatctttgaaaatttg 28
             |||||||||||||||||||||
Sbjct: 22766 taacatatctttgaaaatttg 22746

>emb|BX537323.9| Zebrafish DNA sequence from clone DKEYP-122E2 in linkage group 18,
             complete sequence
          Length = 77788

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 187   acagctttttcagccattttg 207
             |||||||||||||||||||||
Sbjct: 49707 acagctttttcagccattttg 49687

>gb|AC170260.2| Mus musculus BAC clone RP24-347N1 from chromosome 5, complete sequence
          Length = 165011

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    caaagaggaatgaatattca 163
              ||||||||||||||||||||
Sbjct: 164029 caaagaggaatgaatattca 164010

>gb|AC114629.12| Mus musculus chromosome 1, clone RP24-111F20, complete sequence
          Length = 178437

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 229   aaaggccagaaactagccag 248
             ||||||||||||||||||||
Sbjct: 55114 aaaggccagaaactagccag 55095

>gb|AY369378.1| Feline immunodeficiency virus isolate CaONC01 gag protein (gag)
           gene, partial cds
          Length = 1049

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 184 ttcacagctttttcagccattttg 207
           ||||||||||||||||||| ||||
Sbjct: 834 ttcacagctttttcagccaatttg 857

>gb|AC125108.3| Mus musculus BAC clone RP24-226A8 from chromosome 10, complete sequence
          Length = 148202

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 13     tatctttgaaaatttgccta 32
              ||||||||||||||||||||
Sbjct: 115025 tatctttgaaaatttgccta 115006

>gb|AC122924.2| Mus musculus BAC clone RP23-39M16 from 12, complete sequence
          Length = 228614

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 12     atatctttgaaaatttgcctacaa 35
              |||||||||| |||||||||||||
Sbjct: 148465 atatctttgagaatttgcctacaa 148488

>gb|AC123054.2| Mus musculus BAC clone RP24-220N11 from 5, complete sequence
          Length = 174874

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   caaagaggaatgaatattca 163
             ||||||||||||||||||||
Sbjct: 62234 caaagaggaatgaatattca 62253

>gb|AC016839.12| Homo sapiens chromosome 18, clone RP11-399L5, complete sequence
          Length = 152689

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    atatctttgaaaatttgcct 31
             ||||||||||||||||||||
Sbjct: 78109 atatctttgaaaatttgcct 78128

>gb|AC087302.7| Homo sapiens chromosome 17, clone RP11-761L11, complete sequence
          Length = 129564

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   acagctttttcagccatttt 206
             ||||||||||||||||||||
Sbjct: 96068 acagctttttcagccatttt 96049

>gb|AC079776.5| Homo sapiens BAC clone RP11-315H12 from 2, complete sequence
          Length = 198961

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    ctgaaagatgaacccatgtt 105
             ||||||||||||||||||||
Sbjct: 51493 ctgaaagatgaacccatgtt 51474

>gb|AY190941.1| Drosophila erecta clone DERF01_12_N08 (D1431) genomic sequence
          Length = 43101

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    tcaagatgccgggcaaaagt 67
             ||||||||||||||||||||
Sbjct: 40800 tcaagatgccgggcaaaagt 40819

>emb|CR361565.8| Zebrafish DNA sequence from clone CH211-242L1 in linkage group 22,
             complete sequence
          Length = 164475

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   aggaatgaatattcacatga 168
             ||||||||||||||||||||
Sbjct: 40322 aggaatgaatattcacatga 40341

>gb|AC006120.1|AC006120 Homo sapiens chromosome 17, clone hRPK.346_K_10, complete sequence
          Length = 168753

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 187    acagctttttcagccatttt 206
              ||||||||||||||||||||
Sbjct: 141749 acagctttttcagccatttt 141768

>gb|AC174448.2| Mus musculus BAC clone RP23-204P24 from chromosome 16, complete sequence
          Length = 198814

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 48     tcaagatgccgggcaaaagtacac 71
              ||||| ||||||||||||||||||
Sbjct: 186648 tcaaggtgccgggcaaaagtacac 186671

>gb|AC162305.5| Mus musculus BAC clone RP23-470G3 from chromosome 16, complete sequence
          Length = 208504

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 48    tcaagatgccgggcaaaagtacac 71
             ||||| ||||||||||||||||||
Sbjct: 62735 tcaaggtgccgggcaaaagtacac 62758

>gb|AC147029.3| Mus musculus BAC clone RP23-239P5 from 12, complete sequence
          Length = 194385

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 12    atatctttgaaaatttgcctacaa 35
             |||||||||| |||||||||||||
Sbjct: 10209 atatctttgagaatttgcctacaa 10186


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,650,955
Number of Sequences: 3902068
Number of extensions: 2650955
Number of successful extensions: 52146
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52079
Number of HSP's gapped (non-prelim): 67
length of query: 279
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 257
effective length of database: 17,147,199,772
effective search space: 4406830341404
effective search space used: 4406830341404
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)