Clone Name | rbastl42a04 |
---|---|
Clone Library Name | barley_pub |
>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)| Length = 999 Score = 42.0 bits (97), Expect = 4e-04 Identities = 19/34 (55%), Positives = 26/34 (76%) Frame = -2 Query: 243 REEMALVLRVALLCTSRCPQDRPSMRDVLSMLQE 142 +EE++ V+ + LLCTS P +RPSMR V+ MLQE Sbjct: 933 KEEISKVIHIGLLCTSPLPLNRPSMRKVVIMLQE 966
>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 Score = 36.2 bits (82), Expect = 0.021 Identities = 15/32 (46%), Positives = 23/32 (71%) Frame = -2 Query: 240 EEMALVLRVALLCTSRCPQDRPSMRDVLSMLQ 145 EE+ +++VALLCT P +RP M +V+ ML+ Sbjct: 533 EEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 564
>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor| (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS MICROSPOROCYTES1 protein) Length = 1192 Score = 33.5 bits (75), Expect = 0.14 Identities = 15/38 (39%), Positives = 23/38 (60%) Frame = -2 Query: 255 SEAAREEMALVLRVALLCTSRCPQDRPSMRDVLSMLQE 142 S A + +L++A+LC + P RP+M DVL L+E Sbjct: 1154 SVALKNSQLRLLQIAMLCLAETPAKRPNMLDVLKALKE 1191
>TMKL1_ARATH (P33543) Putative kinase-like protein TMKL1 precursor| Length = 674 Score = 32.0 bits (71), Expect = 0.40 Identities = 16/49 (32%), Positives = 26/49 (53%) Frame = -2 Query: 276 MEHVGGSSEAAREEMALVLRVALLCTSRCPQDRPSMRDVLSMLQEARPR 130 +E + G E + L++A+ C + RPSM +V+ L+E RPR Sbjct: 607 LEAMKGIRSPMEEGLVHALKLAMGCCAPVTTVRPSMEEVVKQLEENRPR 655
>PSKR_DAUCA (Q8LPB4) Phytosulfokine receptor precursor (EC 2.7.11.1)| (Phytosulfokine LRR receptor kinase) Length = 1021 Score = 30.0 bits (66), Expect = 1.5 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = -2 Query: 240 EEMALVLRVALLCTSRCPQDRPSMRDVLSMLQ 145 EEM LVL +A C P+ RP+ + ++S L+ Sbjct: 984 EEMLLVLEIACRCLGENPKTRPTTQQLVSWLE 1015
>PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (EC 2.7.11.1)| (Phytosulfokine LRR receptor kinase) Length = 1008 Score = 30.0 bits (66), Expect = 1.5 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = -2 Query: 240 EEMALVLRVALLCTSRCPQDRPSMRDVLSMLQE 142 +EM VL +A LC S P+ RP+ + ++S L + Sbjct: 975 KEMFRVLEIACLCLSENPKQRPTTQQLVSWLDD 1007
>Y890_MYCTU (Q10550) Putative HTH-type transcriptional regulator Rv0890c/MT0914| Length = 882 Score = 30.0 bits (66), Expect = 1.5 Identities = 18/48 (37%), Positives = 26/48 (54%) Frame = -2 Query: 177 PSMRDVLSMLQEARPRPSQKPAAKHVYGVPRS*PTKLTHVMCVLCAPT 34 P+ RDV+ ++ E S K AK ++ PR+ T LTHV L P+ Sbjct: 823 PTERDVVRLVSEGL---SNKDIAKRLFVSPRTVQTHLTHVYAKLGLPS 867
>KIN31_CAEEL (P34265) Probable tyrosine-protein kinase kin-31 (EC 2.7.10.2)| Length = 437 Score = 29.3 bits (64), Expect = 2.6 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Frame = -2 Query: 249 AAREEMALVLRVALLCTSRCPQDRPSMRDVLSMLQE--ARPRPSQKPAAK 106 AA E AL+ R C + P DRP+M DV +LQ + RP+ AK Sbjct: 347 AAPEVQALMTR----CCAENPNDRPTMSDVAQILQRVTGQGRPNFAAIAK 392
>TRK1_LYMST (O76997) Putative neurotrophin receptor LTRK 1 precursor (EC| 2.7.10.1) Length = 794 Score = 28.9 bits (63), Expect = 3.4 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Frame = -2 Query: 282 DVMEHVGGSSEAAREEMAL---VLRVALLCTSRCPQDRPSMRDVLSMLQE 142 +V+EH+ S R V RV C PQDR +M+D+ +L+E Sbjct: 732 EVIEHIKNSRTLKRPPRTCTDGVYRVMQGCWKPNPQDRLTMKDIAELLRE 781
>MALZ_ECOLI (P21517) Maltodextrin glucosidase (EC 3.2.1.20) (Alpha-glucosidase)| Length = 605 Score = 28.5 bits (62), Expect = 4.4 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = -2 Query: 303 GGGGGLRDVMEHVGGSSEAARE 238 G GG R+ M+HV G +EAA+E Sbjct: 343 GEAGGARNNMQHVAGITEAAKE 364
>Y914_MYCBO (P59969) Putative HTH-type transcriptional regulator Mb0914c| Length = 882 Score = 28.5 bits (62), Expect = 4.4 Identities = 17/44 (38%), Positives = 24/44 (54%) Frame = -2 Query: 177 PSMRDVLSMLQEARPRPSQKPAAKHVYGVPRS*PTKLTHVMCVL 46 P+ RDV+ ++ E S K AK ++ PR+ T LTHV L Sbjct: 823 PTERDVVRLVSEGL---SNKDIAKRLFVSPRTVQTHLTHVYAKL 863
>SYA_METMA (Q8PWU0) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 926 Score = 28.1 bits (61), Expect = 5.8 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = -2 Query: 312 KVAGGGGGLRDVMEHVGGSSEAAREEMALVLRVALLCTSRCPQ 184 K+ GGGGG + + +GG ++ R + AL + L+ T+ C + Sbjct: 884 KIVGGGGGGKPALA-MGGGTDPTRIQDALTRGLELVKTAACKE 925
>IFNA_MELGA (P51527) Interferon precursor (TkIFN)| Length = 192 Score = 28.1 bits (61), Expect = 5.8 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = -2 Query: 222 LRVALLCTSRCPQDRPSMRDVLSMLQEARPRPSQKPAAKH 103 L A C PQD RD L +L++ P P Q P +H Sbjct: 25 LAAAAACNHLRPQDATFSRDSLQLLRDMAPSPPQ-PCPQH 63
>WBS14_HUMAN (Q9NP71) Williams-Beuren syndrome chromosome region 14 protein (WS| basic-helix-loop-helix leucine zipper protein) (WS-bHLH) (Mlx interactor) (MLX-interacting protein-like) Length = 852 Score = 28.1 bits (61), Expect = 5.8 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = +2 Query: 257 LPPTCSITSRKPPPPPATL 313 LPPT + T +PPP PATL Sbjct: 569 LPPTPAPTPPRPPPGPATL 587
>YWJF_BACSU (P45866) Hypothetical protein ywjF| Length = 705 Score = 28.1 bits (61), Expect = 5.8 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -2 Query: 303 GGGGGLRDVMEHVGGSSEAAREEMALVLRVALLCTSRCP 187 G GGGL + E G AR E AL + +++ +S CP Sbjct: 625 GAGGGLMWMEEETGNRINVARTEQALAVNPSVI-SSGCP 662
>IPF1_MOUSE (P52946) Insulin promoter factor 1 (IPF-1) (Islet/duodenum homeobox| 1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) (Pancreas/duodenum homeobox 1) Length = 284 Score = 27.7 bits (60), Expect = 7.5 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = +2 Query: 260 PPTCSITSRKPPPPP 304 PP C R+PPPPP Sbjct: 32 PPACLYMGRQPPPPP 46
>TRPD_BACSK (Q5WGS4) Anthranilate phosphoribosyltransferase (EC 2.4.2.18)| Length = 341 Score = 27.7 bits (60), Expect = 7.5 Identities = 17/50 (34%), Positives = 24/50 (48%) Frame = -2 Query: 291 GLRDVMEHVGGSSEAAREEMALVLRVALLCTSRCPQDRPSMRDVLSMLQE 142 G DV+E +G + +A+ EE +L LC P SMR V +E Sbjct: 119 GSADVLEELGINIQASVEEACQMLETTNLCFLFAPLYHQSMRHVAGPRKE 168
>IPF1_RAT (P52947) Insulin promoter factor 1 (IPF-1) (Islet/duodenum homeobox| 1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) Length = 283 Score = 27.7 bits (60), Expect = 7.5 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = +2 Query: 260 PPTCSITSRKPPPPP 304 PP C R+PPPPP Sbjct: 32 PPACLYMGRQPPPPP 46
>IPF1_MESAU (P70118) Insulin promoter factor 1 (IPF-1) (Homeodomain protein| PDX1) Length = 283 Score = 27.7 bits (60), Expect = 7.5 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = +2 Query: 260 PPTCSITSRKPPPPP 304 PP C R+PPPPP Sbjct: 32 PPACLYMGRQPPPPP 46
>IPF1_HUMAN (P52945) Insulin promoter factor 1 (IPF-1) (Pancreas/duodenum| homeobox 1) (PDX-1) (Islet/duodenum homeobox-1) (IDX-1) (Somatostatin-transactivating factor 1) (STF-1) (Insulin upstream factor 1) (IUF-1) (Glucose-sensitive factor) (GSF) Length = 283 Score = 27.7 bits (60), Expect = 7.5 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = +2 Query: 260 PPTCSITSRKPPPPP 304 PP C R+PPPPP Sbjct: 32 PPACLYMGRQPPPPP 46
>AZI1_MOUSE (Q62036) 5-azacytidine-induced protein 1 (Pre-acrosome localization| protein 1) Length = 1060 Score = 27.7 bits (60), Expect = 7.5 Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 13/75 (17%) Frame = -2 Query: 300 GGGGLRDVMEHVGGSSEAAREEMALVLRVALL-------------CTSRCPQDRPSMRDV 160 GGG L ++ + + AREE A R A + R P+DRP R Sbjct: 303 GGGNLLELHRQEEAARKKAREEKARQARQAAIQELQQKRAQKASEAEHRRPKDRPETR-- 360 Query: 159 LSMLQEARPRPSQKP 115 +PRP Q+P Sbjct: 361 ----APEQPRPMQEP 371
>SRK6_BRAOE (Q09092) Putative serine/threonine-protein kinase receptor| precursor (EC 2.7.11.1) (S-receptor kinase) (SRK) Length = 849 Score = 27.7 bits (60), Expect = 7.5 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = -2 Query: 240 EEMALVLRVALLCTSRCPQDRPSMRDVLSML-QEARPRPSQKP 115 +E+ +++ LLC + RP+M V+ M EA P KP Sbjct: 776 QEVLKCIQIGLLCVQELAEHRPAMSSVVWMFGSEATEIPQPKP 818
>RIN3_HUMAN (Q8TB24) Ras and Rab interactor 3 (Ras interaction/interference| protein 3) Length = 984 Score = 27.3 bits (59), Expect = 9.9 Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 7/28 (25%) Frame = +2 Query: 257 LPPTCSITS-------RKPPPPPATLHL 319 LPPT TS R+PPPPP L L Sbjct: 262 LPPTSDATSPTSRWAPRRPPPPPPVLPL 289
>FMN1B_MOUSE (Q05859) Formin-1 isoform IV (Limb deformity protein)| Length = 1206 Score = 27.3 bits (59), Expect = 9.9 Identities = 8/16 (50%), Positives = 11/16 (68%) Frame = +2 Query: 257 LPPTCSITSRKPPPPP 304 +PP C ++ PPPPP Sbjct: 677 IPPVCPVSPPPPPPPP 692
>TNK1_HUMAN (Q13470) Non-receptor tyrosine-protein kinase TNK1 (EC 2.7.10.2)| (CD38 negative kinase 1) Length = 666 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = -2 Query: 216 VALLCTSRCPQDRPSMRDVLSMLQEARP 133 +AL C + P DRPS + +LQEA P Sbjct: 355 LALRCWAPHPADRPSFSHLEGLLQEAGP 382
>LAS17_YEAST (Q12446) Proline-rich protein LAS17| Length = 633 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/20 (65%), Positives = 14/20 (70%), Gaps = 1/20 (5%) Frame = +2 Query: 257 LPPTC-SITSRKPPPPPATL 313 +PPT S TS PPPPPA L Sbjct: 491 IPPTLPSTTSAAPPPPPAFL 510
>KPEL_DROME (Q05652) Probable serine/threonine-protein kinase pelle (EC| 2.7.11.1) Length = 501 Score = 27.3 bits (59), Expect = 9.9 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -2 Query: 222 LRVALLCTSRCPQDRPSMRDVLSMLQ 145 + L CT+ PQDRPSM VL + Sbjct: 471 IEAGLHCTALDPQDRPSMNAVLKRFE 496
>FMN1A_MOUSE (Q05860) Formin-1 isoforms I/II/III (Limb deformity protein)| Length = 1468 Score = 27.3 bits (59), Expect = 9.9 Identities = 8/16 (50%), Positives = 11/16 (68%) Frame = +2 Query: 257 LPPTCSITSRKPPPPP 304 +PP C ++ PPPPP Sbjct: 903 IPPVCPVSPPPPPPPP 918 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,456,556 Number of Sequences: 219361 Number of extensions: 564276 Number of successful extensions: 2920 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 2555 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2885 length of database: 80,573,946 effective HSP length: 82 effective length of database: 62,586,344 effective search space used: 1502072256 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)