ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl42a04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC... 42 4e-04
2BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated rec... 36 0.021
3EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase E... 33 0.14
4TMKL1_ARATH (P33543) Putative kinase-like protein TMKL1 precursor 32 0.40
5PSKR_DAUCA (Q8LPB4) Phytosulfokine receptor precursor (EC 2.7.11... 30 1.5
6PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (... 30 1.5
7Y890_MYCTU (Q10550) Putative HTH-type transcriptional regulator ... 30 1.5
8KIN31_CAEEL (P34265) Probable tyrosine-protein kinase kin-31 (EC... 29 2.6
9TRK1_LYMST (O76997) Putative neurotrophin receptor LTRK 1 precur... 29 3.4
10MALZ_ECOLI (P21517) Maltodextrin glucosidase (EC 3.2.1.20) (Alph... 28 4.4
11Y914_MYCBO (P59969) Putative HTH-type transcriptional regulator ... 28 4.4
12SYA_METMA (Q8PWU0) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... 28 5.8
13IFNA_MELGA (P51527) Interferon precursor (TkIFN) 28 5.8
14WBS14_HUMAN (Q9NP71) Williams-Beuren syndrome chromosome region ... 28 5.8
15YWJF_BACSU (P45866) Hypothetical protein ywjF 28 5.8
16IPF1_MOUSE (P52946) Insulin promoter factor 1 (IPF-1) (Islet/duo... 28 7.5
17TRPD_BACSK (Q5WGS4) Anthranilate phosphoribosyltransferase (EC 2... 28 7.5
18IPF1_RAT (P52947) Insulin promoter factor 1 (IPF-1) (Islet/duode... 28 7.5
19IPF1_MESAU (P70118) Insulin promoter factor 1 (IPF-1) (Homeodoma... 28 7.5
20IPF1_HUMAN (P52945) Insulin promoter factor 1 (IPF-1) (Pancreas/... 28 7.5
21AZI1_MOUSE (Q62036) 5-azacytidine-induced protein 1 (Pre-acrosom... 28 7.5
22SRK6_BRAOE (Q09092) Putative serine/threonine-protein kinase rec... 28 7.5
23RIN3_HUMAN (Q8TB24) Ras and Rab interactor 3 (Ras interaction/in... 27 9.9
24FMN1B_MOUSE (Q05859) Formin-1 isoform IV (Limb deformity protein) 27 9.9
25TNK1_HUMAN (Q13470) Non-receptor tyrosine-protein kinase TNK1 (E... 27 9.9
26LAS17_YEAST (Q12446) Proline-rich protein LAS17 27 9.9
27KPEL_DROME (Q05652) Probable serine/threonine-protein kinase pel... 27 9.9
28FMN1A_MOUSE (Q05860) Formin-1 isoforms I/II/III (Limb deformity ... 27 9.9

>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)|
          Length = 999

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 19/34 (55%), Positives = 26/34 (76%)
 Frame = -2

Query: 243  REEMALVLRVALLCTSRCPQDRPSMRDVLSMLQE 142
            +EE++ V+ + LLCTS  P +RPSMR V+ MLQE
Sbjct: 933  KEEISKVIHIGLLCTSPLPLNRPSMRKVVIMLQE 966



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>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1|
           precursor (EC 2.7.11.1) (BRI1-associated receptor kinase
           1) (Somatic embryogenesis receptor-like kinase 3)
          Length = 615

 Score = 36.2 bits (82), Expect = 0.021
 Identities = 15/32 (46%), Positives = 23/32 (71%)
 Frame = -2

Query: 240 EEMALVLRVALLCTSRCPQDRPSMRDVLSMLQ 145
           EE+  +++VALLCT   P +RP M +V+ ML+
Sbjct: 533 EEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 564



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>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor|
            (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS
            MICROSPOROCYTES1 protein)
          Length = 1192

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = -2

Query: 255  SEAAREEMALVLRVALLCTSRCPQDRPSMRDVLSMLQE 142
            S A +     +L++A+LC +  P  RP+M DVL  L+E
Sbjct: 1154 SVALKNSQLRLLQIAMLCLAETPAKRPNMLDVLKALKE 1191



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>TMKL1_ARATH (P33543) Putative kinase-like protein TMKL1 precursor|
          Length = 674

 Score = 32.0 bits (71), Expect = 0.40
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -2

Query: 276 MEHVGGSSEAAREEMALVLRVALLCTSRCPQDRPSMRDVLSMLQEARPR 130
           +E + G      E +   L++A+ C +     RPSM +V+  L+E RPR
Sbjct: 607 LEAMKGIRSPMEEGLVHALKLAMGCCAPVTTVRPSMEEVVKQLEENRPR 655



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>PSKR_DAUCA (Q8LPB4) Phytosulfokine receptor precursor (EC 2.7.11.1)|
            (Phytosulfokine LRR receptor kinase)
          Length = 1021

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 240  EEMALVLRVALLCTSRCPQDRPSMRDVLSMLQ 145
            EEM LVL +A  C    P+ RP+ + ++S L+
Sbjct: 984  EEMLLVLEIACRCLGENPKTRPTTQQLVSWLE 1015



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>PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (EC 2.7.11.1)|
            (Phytosulfokine LRR receptor kinase)
          Length = 1008

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -2

Query: 240  EEMALVLRVALLCTSRCPQDRPSMRDVLSMLQE 142
            +EM  VL +A LC S  P+ RP+ + ++S L +
Sbjct: 975  KEMFRVLEIACLCLSENPKQRPTTQQLVSWLDD 1007



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>Y890_MYCTU (Q10550) Putative HTH-type transcriptional regulator Rv0890c/MT0914|
          Length = 882

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 18/48 (37%), Positives = 26/48 (54%)
 Frame = -2

Query: 177 PSMRDVLSMLQEARPRPSQKPAAKHVYGVPRS*PTKLTHVMCVLCAPT 34
           P+ RDV+ ++ E     S K  AK ++  PR+  T LTHV   L  P+
Sbjct: 823 PTERDVVRLVSEGL---SNKDIAKRLFVSPRTVQTHLTHVYAKLGLPS 867



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>KIN31_CAEEL (P34265) Probable tyrosine-protein kinase kin-31 (EC 2.7.10.2)|
          Length = 437

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = -2

Query: 249 AAREEMALVLRVALLCTSRCPQDRPSMRDVLSMLQE--ARPRPSQKPAAK 106
           AA E  AL+ R    C +  P DRP+M DV  +LQ    + RP+    AK
Sbjct: 347 AAPEVQALMTR----CCAENPNDRPTMSDVAQILQRVTGQGRPNFAAIAK 392



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>TRK1_LYMST (O76997) Putative neurotrophin receptor LTRK 1 precursor (EC|
           2.7.10.1)
          Length = 794

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = -2

Query: 282 DVMEHVGGSSEAAREEMAL---VLRVALLCTSRCPQDRPSMRDVLSMLQE 142
           +V+EH+  S    R        V RV   C    PQDR +M+D+  +L+E
Sbjct: 732 EVIEHIKNSRTLKRPPRTCTDGVYRVMQGCWKPNPQDRLTMKDIAELLRE 781



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>MALZ_ECOLI (P21517) Maltodextrin glucosidase (EC 3.2.1.20) (Alpha-glucosidase)|
          Length = 605

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -2

Query: 303 GGGGGLRDVMEHVGGSSEAARE 238
           G  GG R+ M+HV G +EAA+E
Sbjct: 343 GEAGGARNNMQHVAGITEAAKE 364



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>Y914_MYCBO (P59969) Putative HTH-type transcriptional regulator Mb0914c|
          Length = 882

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = -2

Query: 177 PSMRDVLSMLQEARPRPSQKPAAKHVYGVPRS*PTKLTHVMCVL 46
           P+ RDV+ ++ E     S K  AK ++  PR+  T LTHV   L
Sbjct: 823 PTERDVVRLVSEGL---SNKDIAKRLFVSPRTVQTHLTHVYAKL 863



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>SYA_METMA (Q8PWU0) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
            (AlaRS)
          Length = 926

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -2

Query: 312  KVAGGGGGLRDVMEHVGGSSEAAREEMALVLRVALLCTSRCPQ 184
            K+ GGGGG +  +  +GG ++  R + AL   + L+ T+ C +
Sbjct: 884  KIVGGGGGGKPALA-MGGGTDPTRIQDALTRGLELVKTAACKE 925



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>IFNA_MELGA (P51527) Interferon precursor (TkIFN)|
          Length = 192

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = -2

Query: 222 LRVALLCTSRCPQDRPSMRDVLSMLQEARPRPSQKPAAKH 103
           L  A  C    PQD    RD L +L++  P P Q P  +H
Sbjct: 25  LAAAAACNHLRPQDATFSRDSLQLLRDMAPSPPQ-PCPQH 63



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>WBS14_HUMAN (Q9NP71) Williams-Beuren syndrome chromosome region 14 protein (WS|
           basic-helix-loop-helix leucine zipper protein) (WS-bHLH)
           (Mlx interactor) (MLX-interacting protein-like)
          Length = 852

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +2

Query: 257 LPPTCSITSRKPPPPPATL 313
           LPPT + T  +PPP PATL
Sbjct: 569 LPPTPAPTPPRPPPGPATL 587



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>YWJF_BACSU (P45866) Hypothetical protein ywjF|
          Length = 705

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 303 GGGGGLRDVMEHVGGSSEAAREEMALVLRVALLCTSRCP 187
           G GGGL  + E  G     AR E AL +  +++ +S CP
Sbjct: 625 GAGGGLMWMEEETGNRINVARTEQALAVNPSVI-SSGCP 662



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>IPF1_MOUSE (P52946) Insulin promoter factor 1 (IPF-1) (Islet/duodenum homeobox|
           1) (IDX-1) (Somatostatin-transactivating factor 1)
           (STF-1) (Pancreas/duodenum homeobox 1)
          Length = 284

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 260 PPTCSITSRKPPPPP 304
           PP C    R+PPPPP
Sbjct: 32  PPACLYMGRQPPPPP 46



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>TRPD_BACSK (Q5WGS4) Anthranilate phosphoribosyltransferase (EC 2.4.2.18)|
          Length = 341

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = -2

Query: 291 GLRDVMEHVGGSSEAAREEMALVLRVALLCTSRCPQDRPSMRDVLSMLQE 142
           G  DV+E +G + +A+ EE   +L    LC    P    SMR V    +E
Sbjct: 119 GSADVLEELGINIQASVEEACQMLETTNLCFLFAPLYHQSMRHVAGPRKE 168



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>IPF1_RAT (P52947) Insulin promoter factor 1 (IPF-1) (Islet/duodenum homeobox|
           1) (IDX-1) (Somatostatin-transactivating factor 1)
           (STF-1)
          Length = 283

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 260 PPTCSITSRKPPPPP 304
           PP C    R+PPPPP
Sbjct: 32  PPACLYMGRQPPPPP 46



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>IPF1_MESAU (P70118) Insulin promoter factor 1 (IPF-1) (Homeodomain protein|
           PDX1)
          Length = 283

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 260 PPTCSITSRKPPPPP 304
           PP C    R+PPPPP
Sbjct: 32  PPACLYMGRQPPPPP 46



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>IPF1_HUMAN (P52945) Insulin promoter factor 1 (IPF-1) (Pancreas/duodenum|
           homeobox 1) (PDX-1) (Islet/duodenum homeobox-1) (IDX-1)
           (Somatostatin-transactivating factor 1) (STF-1) (Insulin
           upstream factor 1) (IUF-1) (Glucose-sensitive factor)
           (GSF)
          Length = 283

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 260 PPTCSITSRKPPPPP 304
           PP C    R+PPPPP
Sbjct: 32  PPACLYMGRQPPPPP 46



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>AZI1_MOUSE (Q62036) 5-azacytidine-induced protein 1 (Pre-acrosome localization|
           protein 1)
          Length = 1060

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 13/75 (17%)
 Frame = -2

Query: 300 GGGGLRDVMEHVGGSSEAAREEMALVLRVALL-------------CTSRCPQDRPSMRDV 160
           GGG L ++      + + AREE A   R A +                R P+DRP  R  
Sbjct: 303 GGGNLLELHRQEEAARKKAREEKARQARQAAIQELQQKRAQKASEAEHRRPKDRPETR-- 360

Query: 159 LSMLQEARPRPSQKP 115
                  +PRP Q+P
Sbjct: 361 ----APEQPRPMQEP 371



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>SRK6_BRAOE (Q09092) Putative serine/threonine-protein kinase receptor|
           precursor (EC 2.7.11.1) (S-receptor kinase) (SRK)
          Length = 849

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -2

Query: 240 EEMALVLRVALLCTSRCPQDRPSMRDVLSML-QEARPRPSQKP 115
           +E+   +++ LLC     + RP+M  V+ M   EA   P  KP
Sbjct: 776 QEVLKCIQIGLLCVQELAEHRPAMSSVVWMFGSEATEIPQPKP 818



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>RIN3_HUMAN (Q8TB24) Ras and Rab interactor 3 (Ras interaction/interference|
           protein 3)
          Length = 984

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 7/28 (25%)
 Frame = +2

Query: 257 LPPTCSITS-------RKPPPPPATLHL 319
           LPPT   TS       R+PPPPP  L L
Sbjct: 262 LPPTSDATSPTSRWAPRRPPPPPPVLPL 289



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>FMN1B_MOUSE (Q05859) Formin-1 isoform IV (Limb deformity protein)|
          Length = 1206

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 257 LPPTCSITSRKPPPPP 304
           +PP C ++   PPPPP
Sbjct: 677 IPPVCPVSPPPPPPPP 692



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>TNK1_HUMAN (Q13470) Non-receptor tyrosine-protein kinase TNK1 (EC 2.7.10.2)|
           (CD38 negative kinase 1)
          Length = 666

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -2

Query: 216 VALLCTSRCPQDRPSMRDVLSMLQEARP 133
           +AL C +  P DRPS   +  +LQEA P
Sbjct: 355 LALRCWAPHPADRPSFSHLEGLLQEAGP 382



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>LAS17_YEAST (Q12446) Proline-rich protein LAS17|
          Length = 633

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 13/20 (65%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = +2

Query: 257 LPPTC-SITSRKPPPPPATL 313
           +PPT  S TS  PPPPPA L
Sbjct: 491 IPPTLPSTTSAAPPPPPAFL 510



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>KPEL_DROME (Q05652) Probable serine/threonine-protein kinase pelle (EC|
           2.7.11.1)
          Length = 501

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -2

Query: 222 LRVALLCTSRCPQDRPSMRDVLSMLQ 145
           +   L CT+  PQDRPSM  VL   +
Sbjct: 471 IEAGLHCTALDPQDRPSMNAVLKRFE 496



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>FMN1A_MOUSE (Q05860) Formin-1 isoforms I/II/III (Limb deformity protein)|
          Length = 1468

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 257 LPPTCSITSRKPPPPP 304
           +PP C ++   PPPPP
Sbjct: 903 IPPVCPVSPPPPPPPP 918


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,456,556
Number of Sequences: 219361
Number of extensions: 564276
Number of successful extensions: 2920
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2885
length of database: 80,573,946
effective HSP length: 82
effective length of database: 62,586,344
effective search space used: 1502072256
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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