ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbastl42a03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT018300.1| Zea mays clone EL01T0206D10.c mRNA sequence Length = 828 Score = 157 bits (79), Expect = 4e-35 Identities = 125/139 (89%), Gaps = 1/139 (0%) Strand = Plus / Minus Query: 320 ggacgagctcactcttcgtcctcactgattagcgcaaacgagaatggtgcgaacttgtaa 379 |||||| |||| ||||| ||||||| || |||||||| ||||||| |||||||||||| Sbjct: 502 ggacgatctcaatcttcttcctcacgaatcagcgcaaagtagaatggggcgaacttgtaa 443 Query: 380 ccatcaccctcatagaacttgttctggaactccacccagtggagcctcag-gcatgaagg 438 |||||||| |||||||||||||||||||||||||||||||| |||||||| || |||||| Sbjct: 442 ccatcaccttcatagaacttgttctggaactccacccagtgaagcctcagtgcgtgaagg 383 Query: 439 aatgcacttagggtctcca 457 |||||||| |||||||||| Sbjct: 382 aatgcactcagggtctcca 364
>gb|BT017633.1| Zea mays clone EL01N0437F06.c mRNA sequence Length = 961 Score = 139 bits (70), Expect = 9e-30 Identities = 119/134 (88%), Gaps = 1/134 (0%) Strand = Plus / Minus Query: 325 agctcactcttcgtcctcactgattagcgcaaacgagaatggtgcgaacttgtaaccatc 384 |||||| ||||| ||||||| || ||||| || |||||||| || |||||||| ||||| Sbjct: 615 agctcaatcttcctcctcacgaatcagcgcgaaggagaatggggcaaacttgtagccatc 556 Query: 385 accctcatagaacttgttctggaactccacccagtggagcctcag-gcatgaaggaatgc 443 ||| |||||||||||||||||||||||||||||||| |||||||| || ||||||||||| Sbjct: 555 accttcatagaacttgttctggaactccacccagtgaagcctcagcgcgtgaaggaatgc 496 Query: 444 acttagggtctcca 457 ||| |||||||||| Sbjct: 495 actcagggtctcca 482
>ref|NM_195204.1| Oryza sativa (japonica cultivar-group) putative proton pump (OSJNBa0029P16.14), mRNA Length = 2352 Score = 119 bits (60), Expect = 8e-24 Identities = 82/88 (93%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 371 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctcag- 429 |||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 2309 aacttgtatccatcaccctcgtaaaacttgttctggaactccacccagtggagcctcaga 2250 Query: 430 gcatgaaggaatgcacttagggtctcca 457 ||||| | |||||||||||||||||||| Sbjct: 2249 gcatgcaagaatgcacttagggtctcca 2222
>gb|AC093568.2| Oryza sativa chromosome 10 clone OSJNBa0029P16, complete sequence Length = 173644 Score = 119 bits (60), Expect = 8e-24 Identities = 82/88 (93%), Gaps = 1/88 (1%) Strand = Plus / Plus Query: 371 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctcag- 429 |||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 104026 aacttgtatccatcaccctcgtaaaacttgttctggaactccacccagtggagcctcaga 104085 Query: 430 gcatgaaggaatgcacttagggtctcca 457 ||||| | |||||||||||||||||||| Sbjct: 104086 gcatgcaagaatgcacttagggtctcca 104113
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 119 bits (60), Expect = 8e-24 Identities = 82/88 (93%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 371 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctcag- 429 |||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 5439622 aacttgtatccatcaccctcgtaaaacttgttctggaactccacccagtggagcctcaga 5439563 Query: 430 gcatgaaggaatgcacttagggtctcca 457 ||||| | |||||||||||||||||||| Sbjct: 5439562 gcatgcaagaatgcacttagggtctcca 5439535
>dbj|AK058856.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-005-B12, full insert sequence Length = 689 Score = 119 bits (60), Expect = 8e-24 Identities = 82/88 (93%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 371 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctcag- 429 |||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 277 aacttgtatccatcaccctcgtaaaacttgttctggaactccacccagtggagcctcaga 218 Query: 430 gcatgaaggaatgcacttagggtctcca 457 ||||| | |||||||||||||||||||| Sbjct: 217 gcatgcaagaatgcacttagggtctcca 190
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 119 bits (60), Expect = 8e-24 Identities = 82/88 (93%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 371 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctcag- 429 |||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 5440409 aacttgtatccatcaccctcgtaaaacttgttctggaactccacccagtggagcctcaga 5440350 Query: 430 gcatgaaggaatgcacttagggtctcca 457 ||||| | |||||||||||||||||||| Sbjct: 5440349 gcatgcaagaatgcacttagggtctcca 5440322
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 111 bits (56), Expect = 2e-21 Identities = 114/132 (86%), Gaps = 1/132 (0%) Strand = Plus / Minus Query: 327 ctcactcttcgtcctcactgattagcgcaaacgagaatggtgcgaacttgtaaccatcac 386 |||| ||||| || |||||||| || || || ||||| || || |||||||| ||||| | Sbjct: 7960001 ctcagtcttcctcttcactgatcagtgcgaaagagaagggcgcaaacttgtatccatcgc 7959942 Query: 387 cctcatagaacttgttctggaactccacccagtggagcc-tcaggcatgaaggaatgcac 445 |||||||||| |||||||||||||||||||| || |||| | |||| ||||||||||||| Sbjct: 7959941 cctcatagaatttgttctggaactccacccaatgtagccttaaggcgtgaaggaatgcac 7959882 Query: 446 ttagggtctcca 457 |||||||||||| Sbjct: 7959881 ttagggtctcca 7959870 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Minus Query: 89 ttattagcattacgccaaaataagggtaatgccac 123 |||||||| |||| ||||||||||||| ||||||| Sbjct: 7960236 ttattagccttacaccaaaataagggtgatgccac 7960202
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 111 bits (56), Expect = 2e-21 Identities = 114/132 (86%), Gaps = 1/132 (0%) Strand = Plus / Minus Query: 327 ctcactcttcgtcctcactgattagcgcaaacgagaatggtgcgaacttgtaaccatcac 386 |||| ||||| || |||||||| || || || ||||| || || |||||||| ||||| | Sbjct: 7957836 ctcagtcttcctcttcactgatcagtgcgaaagagaagggcgcaaacttgtatccatcgc 7957777 Query: 387 cctcatagaacttgttctggaactccacccagtggagcc-tcaggcatgaaggaatgcac 445 |||||||||| |||||||||||||||||||| || |||| | |||| ||||||||||||| Sbjct: 7957776 cctcatagaatttgttctggaactccacccaatgtagccttaaggcgtgaaggaatgcac 7957717 Query: 446 ttagggtctcca 457 |||||||||||| Sbjct: 7957716 ttagggtctcca 7957705 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Minus Query: 89 ttattagcattacgccaaaataagggtaatgccac 123 |||||||| |||| ||||||||||||| ||||||| Sbjct: 7958071 ttattagccttacaccaaaataagggtgatgccac 7958037
>gb|AC134240.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0081I10, complete sequence Length = 143298 Score = 111 bits (56), Expect = 2e-21 Identities = 114/132 (86%), Gaps = 1/132 (0%) Strand = Plus / Minus Query: 327 ctcactcttcgtcctcactgattagcgcaaacgagaatggtgcgaacttgtaaccatcac 386 |||| ||||| || |||||||| || || || ||||| || || |||||||| ||||| | Sbjct: 27364 ctcagtcttcctcttcactgatcagtgcgaaagagaagggcgcaaacttgtatccatcgc 27305 Query: 387 cctcatagaacttgttctggaactccacccagtggagcc-tcaggcatgaaggaatgcac 445 |||||||||| |||||||||||||||||||| || |||| | |||| ||||||||||||| Sbjct: 27304 cctcatagaatttgttctggaactccacccaatgtagccttaaggcgtgaaggaatgcac 27245 Query: 446 ttagggtctcca 457 |||||||||||| Sbjct: 27244 ttagggtctcca 27233 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Minus Query: 89 ttattagcattacgccaaaataagggtaatgccac 123 |||||||| |||| ||||||||||||| ||||||| Sbjct: 27599 ttattagccttacaccaaaataagggtgatgccac 27565
>gb|AC134235.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030J04, complete sequence Length = 153431 Score = 111 bits (56), Expect = 2e-21 Identities = 114/132 (86%), Gaps = 1/132 (0%) Strand = Plus / Minus Query: 327 ctcactcttcgtcctcactgattagcgcaaacgagaatggtgcgaacttgtaaccatcac 386 |||| ||||| || |||||||| || || || ||||| || || |||||||| ||||| | Sbjct: 145599 ctcagtcttcctcttcactgatcagtgcgaaagagaagggcgcaaacttgtatccatcgc 145540 Query: 387 cctcatagaacttgttctggaactccacccagtggagcc-tcaggcatgaaggaatgcac 445 |||||||||| |||||||||||||||||||| || |||| | |||| ||||||||||||| Sbjct: 145539 cctcatagaatttgttctggaactccacccaatgtagccttaaggcgtgaaggaatgcac 145480 Query: 446 ttagggtctcca 457 |||||||||||| Sbjct: 145479 ttagggtctcca 145468 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Minus Query: 89 ttattagcattacgccaaaataagggtaatgccac 123 |||||||| |||| ||||||||||||| ||||||| Sbjct: 145834 ttattagccttacaccaaaataagggtgatgccac 145800
>dbj|AK119298.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-E09, full insert sequence Length = 3025 Score = 111 bits (56), Expect = 2e-21 Identities = 114/132 (86%), Gaps = 1/132 (0%) Strand = Plus / Minus Query: 327 ctcactcttcgtcctcactgattagcgcaaacgagaatggtgcgaacttgtaaccatcac 386 |||| ||||| || |||||||| || || || ||||| || || |||||||| ||||| | Sbjct: 2658 ctcagtcttcctcttcactgatcagtgcgaaagagaagggcgcaaacttgtatccatcgc 2599 Query: 387 cctcatagaacttgttctggaactccacccagtggagcc-tcaggcatgaaggaatgcac 445 |||||||||| |||||||||||||||||||| || |||| | |||| ||||||||||||| Sbjct: 2598 cctcatagaatttgttctggaactccacccaatgtagccttaaggcgtgaaggaatgcac 2539 Query: 446 ttagggtctcca 457 |||||||||||| Sbjct: 2538 ttagggtctcca 2527 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Minus Query: 89 ttattagcattacgccaaaataagggtaatgccac 123 |||||||| |||| ||||||||||||| ||||||| Sbjct: 2893 ttattagccttacaccaaaataagggtgatgccac 2859
>dbj|AK101151.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027C12, full insert sequence Length = 3018 Score = 111 bits (56), Expect = 2e-21 Identities = 114/132 (86%), Gaps = 1/132 (0%) Strand = Plus / Minus Query: 327 ctcactcttcgtcctcactgattagcgcaaacgagaatggtgcgaacttgtaaccatcac 386 |||| ||||| || |||||||| || || || ||||| || || |||||||| ||||| | Sbjct: 2651 ctcagtcttcctcttcactgatcagtgcgaaagagaagggcgcaaacttgtatccatcgc 2592 Query: 387 cctcatagaacttgttctggaactccacccagtggagcc-tcaggcatgaaggaatgcac 445 |||||||||| |||||||||||||||||||| || |||| | |||| ||||||||||||| Sbjct: 2591 cctcatagaatttgttctggaactccacccaatgtagccttaaggcgtgaaggaatgcac 2532 Query: 446 ttagggtctcca 457 |||||||||||| Sbjct: 2531 ttagggtctcca 2520 Score = 46.1 bits (23), Expect = 0.100 Identities = 32/35 (91%) Strand = Plus / Minus Query: 89 ttattagcattacgccaaaataagggtaatgccac 123 |||||||| |||| ||||||||||||| ||||||| Sbjct: 2886 ttattagccttacaccaaaataagggtgatgccac 2852
>dbj|D21309.1|RICSS281 Oryza sativa SS281 mRNA for T cell produced protein, partial sequence Length = 370 Score = 89.7 bits (45), Expect = 7e-15 Identities = 60/64 (93%), Gaps = 1/64 (1%) Strand = Plus / Minus Query: 395 aacttgttctggaactccacccagtggagcctcag-gcatgaaggaatgcacttagggtc 453 |||||||||||||||||||||||||| |||||||| ||||| | |||||||||||||||| Sbjct: 330 aacttgttctggaactccacccagtgnagcctcagagcatgcaagaatgcacttagggtc 271 Query: 454 tcca 457 |||| Sbjct: 270 tcca 267
>emb|AJ580823.1|LCO580823 Lotus corniculatus var. japonicus ORF1, ORF2, ORF3 and genes for vacuolar proton-ATPase subunit-like protein, papain-like cysteine proteinase-like protein 1 and papain-like cysteine proteinase-like protein 2 Length = 46563 Score = 77.8 bits (39), Expect = 3e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 370 gaacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 420 ||||||||||||||| |||||||| |||||||| ||||||||||||||||| Sbjct: 21564 gaacttgtaaccatcgccctcataaaacttgttttggaactccacccagtg 21514
>dbj|AP005666.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT09E01, TM0258b, complete sequence Length = 46491 Score = 77.8 bits (39), Expect = 3e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 370 gaacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 420 ||||||||||||||| |||||||| |||||||| ||||||||||||||||| Sbjct: 21630 gaacttgtaaccatcgccctcataaaacttgttttggaactccacccagtg 21580
>dbj|AB092808.1| Lotus japonicus gene for hypothetical proteins, complete and partial cds, clone:BAC259.12D-1 Length = 32644 Score = 77.8 bits (39), Expect = 3e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 370 gaacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 420 ||||||||||||||| |||||||| |||||||| ||||||||||||||||| Sbjct: 8739 gaacttgtaaccatcgccctcataaaacttgttttggaactccacccagtg 8689
>ref|NM_127713.3| Arabidopsis thaliana ATPase AT2G21410 mRNA, complete cds Length = 2860 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 371 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 420 |||||||||||||| || || ||||||||||||||| ||||||||||||| Sbjct: 2506 aacttgtaaccatcgccttcgtagaacttgttctggtactccacccagtg 2457
>ref|NM_130840.2| Homo sapiens ATPase, H+ transporting, lysosomal V0 subunit a4 (ATP6V0A4), transcript variant 2, mRNA Length = 3049 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 371 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 420 |||||||||||||| || |||||||||||||||||||||| |||||||| Sbjct: 2654 aacttgtaaccatccccgacatagaacttgttctggaactcaacccagtg 2605
>ref|NM_020632.2| Homo sapiens ATPase, H+ transporting, lysosomal V0 subunit a4 (ATP6V0A4), transcript variant 1, mRNA Length = 3152 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 371 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 420 |||||||||||||| || |||||||||||||||||||||| |||||||| Sbjct: 2757 aacttgtaaccatccccgacatagaacttgttctggaactcaacccagtg 2708
>ref|NM_130841.2| Homo sapiens ATPase, H+ transporting, lysosomal V0 subunit a4 (ATP6V0A4), transcript variant 3, mRNA Length = 3107 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 371 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 420 |||||||||||||| || |||||||||||||||||||||| |||||||| Sbjct: 2712 aacttgtaaccatccccgacatagaacttgttctggaactcaacccagtg 2663
>gb|BC109305.1| Homo sapiens ATPase, H+ transporting, lysosomal V0 subunit a4, transcript variant 2, mRNA (cDNA clone MGC:130017 IMAGE:40035237), complete cds Length = 2709 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 371 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 420 |||||||||||||| || |||||||||||||||||||||| |||||||| Sbjct: 2562 aacttgtaaccatccccgacatagaacttgttctggaactcaacccagtg 2513
>gb|BC109304.1| Homo sapiens ATPase, H+ transporting, lysosomal V0 subunit a4, transcript variant 2, mRNA (cDNA clone MGC:130016 IMAGE:40035236), complete cds Length = 2709 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 371 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 420 |||||||||||||| || |||||||||||||||||||||| |||||||| Sbjct: 2562 aacttgtaaccatccccgacatagaacttgttctggaactcaacccagtg 2513
>gb|AY124855.1| Arabidopsis thaliana At2g21410/F3K23.17 mRNA, complete cds Length = 2466 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 371 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 420 |||||||||||||| || || ||||||||||||||| ||||||||||||| Sbjct: 2423 aacttgtaaccatcgccttcgtagaacttgttctggtactccacccagtg 2374
>dbj|AK055789.1| Homo sapiens cDNA FLJ31227 fis, clone KIDNE2004411, highly similar to Homo sapiens vacuolar proton pump 116 kDa accessory subunit (ATP6N1B) mRNA Length = 2037 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 371 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 420 |||||||||||||| || |||||||||||||||||||||| |||||||| Sbjct: 1659 aacttgtaaccatccccgacatagaacttgttctggaactcaacccagtg 1610
>gb|AY099690.1| Arabidopsis thaliana putative vacuolar proton-ATPase subunit (At2g21410) mRNA, complete cds Length = 2667 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 371 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 420 |||||||||||||| || || ||||||||||||||| ||||||||||||| Sbjct: 2502 aacttgtaaccatcgccttcgtagaacttgttctggtactccacccagtg 2453
>gb|AC006841.7| Arabidopsis thaliana chromosome 2 clone F3K23 map mi148, complete sequence Length = 125045 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 371 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 420 |||||||||||||| || || ||||||||||||||| ||||||||||||| Sbjct: 65137 aacttgtaaccatcgccttcgtagaacttgttctggtactccacccagtg 65088
>gb|AF424556.1|AF424556 Arabidopsis thaliana At2g21410/F3K23.17 mRNA, complete cds Length = 2631 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 371 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 420 |||||||||||||| || || ||||||||||||||| ||||||||||||| Sbjct: 2459 aacttgtaaccatcgccttcgtagaacttgttctggtactccacccagtg 2410
>dbj|AK221420.1| Arabidopsis thaliana mRNA for putative vacuolar proton-ATPase subunit, complete cds, clone: RAFL05-04-L13 Length = 357 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 371 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 420 |||||||||||||| || || ||||||||||||||| ||||||||||||| Sbjct: 181 aacttgtaaccatcgccttcgtagaacttgttctggtactccacccagtg 132
>gb|AY053417.1| Arabidopsis thaliana At2g21410/F3K23.17 mRNA, complete cds Length = 2852 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 371 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 420 |||||||||||||| || || ||||||||||||||| ||||||||||||| Sbjct: 2498 aacttgtaaccatcgccttcgtagaacttgttctggtactccacccagtg 2449
>gb|AF245517.1|AF245517 Homo sapiens vacuolar proton pump 116 kDa accessory subunit (ATP6N1B) mRNA, complete cds, alternatively spliced Length = 3137 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 371 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 420 |||||||||||||| || |||||||||||||||||||||| |||||||| Sbjct: 2742 aacttgtaaccatccccgacatagaacttgttctggaactcaacccagtg 2693
>ref|XM_597181.2| PREDICTED: Bos taurus similar to ATPase, H+ transporting, lysosomal V0 subunit a isoform 4, transcript variant 1 (LOC518974), mRNA Length = 3157 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 359 gagaatggtgcgaacttgtaaccatcaccctcatagaacttgttctggaactccacccag 418 |||||||| | ||||||||||||| | || ||||||||||| ||||||||||||||| Sbjct: 2477 gagaatggagagaacttgtaaccagccccagtgtagaacttgttttggaactccacccag 2418 Query: 419 tggagcctcagg 430 || ||||||||| Sbjct: 2417 tgcagcctcagg 2406
>ref|XM_873205.1| PREDICTED: Bos taurus similar to ATPase, H+ transporting, lysosomal V0 subunit a isoform 4, transcript variant 3 (LOC518974), mRNA Length = 2105 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 359 gagaatggtgcgaacttgtaaccatcaccctcatagaacttgttctggaactccacccag 418 |||||||| | ||||||||||||| | || ||||||||||| ||||||||||||||| Sbjct: 1425 gagaatggagagaacttgtaaccagccccagtgtagaacttgttttggaactccacccag 1366 Query: 419 tggagcctcagg 430 || ||||||||| Sbjct: 1365 tgcagcctcagg 1354
>ref|XM_864430.1| PREDICTED: Bos taurus similar to ATPase, H+ transporting, lysosomal V0 subunit a isoform 4, transcript variant 2 (LOC518974), mRNA Length = 3163 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 359 gagaatggtgcgaacttgtaaccatcaccctcatagaacttgttctggaactccacccag 418 |||||||| | ||||||||||||| | || ||||||||||| ||||||||||||||| Sbjct: 2483 gagaatggagagaacttgtaaccagccccagtgtagaacttgttttggaactccacccag 2424 Query: 419 tggagcctcagg 430 || ||||||||| Sbjct: 2423 tgcagcctcagg 2412
>ref|NM_120069.3| Arabidopsis thaliana RD19 (RESPONSIVE TO DEHYDRATION 19); cysteine-type peptidase AT4G39090 (RD19) mRNA, complete cds Length = 2514 Score = 61.9 bits (31), Expect = 2e-06 Identities = 77/91 (84%), Gaps = 1/91 (1%) Strand = Plus / Plus Query: 368 gcgaacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctc 427 ||||||||||||||||| || || ||||| |||||||| ||||| |||||||| || | | Sbjct: 2377 gcgaacttgtaaccatctccttcgtagaatttgttctgaaactcaacccagtgaagacgc 2436 Query: 428 ag-gcatgaaggaatgcacttagggtctcca 457 || || |||||||| || ||||| ||||||| Sbjct: 2437 agcgcgtgaaggaacgcgcttagtgtctcca 2467
>ref|NM_120068.3| Arabidopsis thaliana ATPase AT4G39080 mRNA, complete cds Length = 4147 Score = 61.9 bits (31), Expect = 2e-06 Identities = 77/91 (84%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 368 gcgaacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctc 427 ||||||||||||||||| || || ||||| |||||||| ||||| |||||||| || | | Sbjct: 2510 gcgaacttgtaaccatctccttcgtagaatttgttctgaaactcaacccagtgaagacgc 2451 Query: 428 ag-gcatgaaggaatgcacttagggtctcca 457 || || |||||||| || ||||| ||||||| Sbjct: 2450 agcgcgtgaaggaacgcgcttagtgtctcca 2420
>ref|XM_427533.1| PREDICTED: Gallus gallus similar to ATPase, H+ transporting, lysosomal V0 subunit a isoform 4; vacuolar proton pump 116 kDa accessory subunit; vacuolar proton pump, subunit 2; H(+)-transporting two-sector ATPase, noncatalytic accessory protein 1B; ATPase, H+ transporting, ... (LOC429976), partial mRNA Length = 510 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 390 catagaacttgttctggaactccacccagtg 420 ||||||||||||||||||||||||||||||| Sbjct: 442 catagaacttgttctggaactccacccagtg 412
>ref|XM_853949.1| PREDICTED: Canis familiaris similar to ATPase, H+ transporting, lysosomal V0 subunit a isoform 4, transcript variant 4 (LOC482779), mRNA Length = 2793 Score = 61.9 bits (31), Expect = 2e-06 Identities = 62/71 (87%), Gaps = 1/71 (1%) Strand = Plus / Minus Query: 371 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctca-g 429 |||||||||||| | || | ||||||||||||||||||||||||||||| || | || | Sbjct: 2462 aacttgtaaccagccccgacgtagaacttgttctggaactccacccagtgcagtcgcagg 2403 Query: 430 gcatgaaggaa 440 ||||||||||| Sbjct: 2402 gcatgaaggaa 2392
>ref|XM_539895.2| PREDICTED: Canis familiaris similar to ATPase, H+ transporting, lysosomal V0 subunit a isoform 4, transcript variant 2 (LOC482779), mRNA Length = 2802 Score = 61.9 bits (31), Expect = 2e-06 Identities = 62/71 (87%), Gaps = 1/71 (1%) Strand = Plus / Minus Query: 371 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctca-g 429 |||||||||||| | || | ||||||||||||||||||||||||||||| || | || | Sbjct: 2471 aacttgtaaccagccccgacgtagaacttgttctggaactccacccagtgcagtcgcagg 2412 Query: 430 gcatgaaggaa 440 ||||||||||| Sbjct: 2411 gcatgaaggaa 2401
>emb|AL161594.2|ATCHRIV90 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 90 Length = 198987 Score = 61.9 bits (31), Expect = 2e-06 Identities = 77/91 (84%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 368 gcgaacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctc 427 ||||||||||||||||| || || ||||| |||||||| ||||| |||||||| || | | Sbjct: 128867 gcgaacttgtaaccatctccttcgtagaatttgttctgaaactcaacccagtgaagacgc 128808 Query: 428 ag-gcatgaaggaatgcacttagggtctcca 457 || || |||||||| || ||||| ||||||| Sbjct: 128807 agcgcgtgaaggaacgcgcttagtgtctcca 128777
>emb|AL035679.1|ATF19H22 Arabidopsis thaliana DNA chromosome 4, BAC clone F19H22 (ESSA project) Length = 100469 Score = 61.9 bits (31), Expect = 2e-06 Identities = 77/91 (84%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 368 gcgaacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctc 427 ||||||||||||||||| || || ||||| |||||||| ||||| |||||||| || | | Sbjct: 90857 gcgaacttgtaaccatctccttcgtagaatttgttctgaaactcaacccagtgaagacgc 90798 Query: 428 ag-gcatgaaggaatgcacttagggtctcca 457 || || |||||||| || ||||| ||||||| Sbjct: 90797 agcgcgtgaaggaacgcgcttagtgtctcca 90767
>emb|AJ720996.1| Gallus gallus mRNA for hypothetical protein, clone 32b14 Length = 3156 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 390 catagaacttgttctggaactccacccagtg 420 ||||||||||||||||||||||||||||||| Sbjct: 2761 catagaacttgttctggaactccacccagtg 2731
>gb|AY060557.1| Arabidopsis thaliana AT4g39080/F19H22_180 mRNA, complete cds Length = 2819 Score = 61.9 bits (31), Expect = 2e-06 Identities = 77/91 (84%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 368 gcgaacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctc 427 ||||||||||||||||| || || ||||| |||||||| ||||| |||||||| || | | Sbjct: 2501 gcgaacttgtaaccatctccttcgtagaatttgttctgaaactcaacccagtgaagacgc 2442 Query: 428 ag-gcatgaaggaatgcacttagggtctcca 457 || || |||||||| || ||||| ||||||| Sbjct: 2441 agcgcgtgaaggaacgcgcttagtgtctcca 2411
>dbj|AK221976.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds, clone: RAFL22-57-M19 Length = 870 Score = 61.9 bits (31), Expect = 2e-06 Identities = 77/91 (84%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 368 gcgaacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctc 427 ||||||||||||||||| || || ||||| |||||||| ||||| |||||||| || | | Sbjct: 549 gcgaacttgtaaccatctccttcgtagaatttgttctgaaactcaacccagtgaagacgc 490 Query: 428 ag-gcatgaaggaatgcacttagggtctcca 457 || || |||||||| || ||||| ||||||| Sbjct: 489 agcgcgtgaaggaacgcgcttagtgtctcca 459
>emb|BX828835.1|CNS0A2O1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL42ZG11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 690 Score = 61.9 bits (31), Expect = 2e-06 Identities = 77/91 (84%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 368 gcgaacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctc 427 ||||||||||||||||| || || ||||| |||||||| ||||| |||||||| || | | Sbjct: 380 gcgaacttgtaaccatctccttcgtagaatttgttctgaaactcaacccagtgaagacgc 321 Query: 428 ag-gcatgaaggaatgcacttagggtctcca 457 || || |||||||| || ||||| ||||||| Sbjct: 320 agcgcgtgaaggaacgcgcttagtgtctcca 290
>emb|BX828782.1|CNS0A2IS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL38ZC08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 776 Score = 61.9 bits (31), Expect = 2e-06 Identities = 77/91 (84%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 368 gcgaacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctc 427 ||||||||||||||||| || || ||||| |||||||| ||||| |||||||| || | | Sbjct: 465 gcgaacttgtaaccatctccttcgtagaatttgttctgaaactcaacccagtgaagacgc 406 Query: 428 ag-gcatgaaggaatgcacttagggtctcca 457 || || |||||||| || ||||| ||||||| Sbjct: 405 agcgcgtgaaggaacgcgcttagtgtctcca 375
>gb|BT002615.1| Arabidopsis thaliana At4g39080/F19H22_180 mRNA, complete cds Length = 2466 Score = 61.9 bits (31), Expect = 2e-06 Identities = 77/91 (84%), Gaps = 1/91 (1%) Strand = Plus / Minus Query: 368 gcgaacttgtaaccatcaccctcatagaacttgttctggaactccacccagtggagcctc 427 ||||||||||||||||| || || ||||| |||||||| ||||| |||||||| || | | Sbjct: 2426 gcgaacttgtaaccatctccttcgtagaatttgttctgaaactcaacccagtgaagacgc 2367 Query: 428 ag-gcatgaaggaatgcacttagggtctcca 457 || || |||||||| || ||||| ||||||| Sbjct: 2366 agcgcgtgaaggaacgcgcttagtgtctcca 2336
>ref|XM_591411.2| PREDICTED: Bos taurus similar to T-cell, immune regulator 1 isoform a (LOC513684), mRNA Length = 2690 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtggagcc 425 ||||||||||||||||||||||||||||| |||| Sbjct: 2434 tagaacttgttctggaactccacccagtgcagcc 2401
>ref|XM_540812.2| PREDICTED: Canis familiaris similar to T-cell, immune regulator 1 isoform a, transcript variant 1 (LOC483691), mRNA Length = 2689 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtggagcc 425 ||||||||||||||||||||||||||||| |||| Sbjct: 2565 tagaacttgttctggaactccacccagtgtagcc 2532
>ref|XM_858982.1| PREDICTED: Canis familiaris similar to T-cell, immune regulator 1 isoform a, transcript variant 5 (LOC483691), mRNA Length = 2713 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtggagcc 425 ||||||||||||||||||||||||||||| |||| Sbjct: 2589 tagaacttgttctggaactccacccagtgtagcc 2556
>ref|XM_858965.1| PREDICTED: Canis familiaris similar to T-cell, immune regulator 1 isoform a, transcript variant 4 (LOC483691), mRNA Length = 2676 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtggagcc 425 ||||||||||||||||||||||||||||| |||| Sbjct: 2553 tagaacttgttctggaactccacccagtgtagcc 2520
>ref|XM_858943.1| PREDICTED: Canis familiaris similar to T-cell, immune regulator 1 isoform a, transcript variant 3 (LOC483691), mRNA Length = 2718 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtggagcc 425 ||||||||||||||||||||||||||||| |||| Sbjct: 2595 tagaacttgttctggaactccacccagtgtagcc 2562
>ref|XM_858926.1| PREDICTED: Canis familiaris similar to T-cell, immune regulator 1 isoform a, transcript variant 2 (LOC483691), mRNA Length = 2165 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtggagcc 425 ||||||||||||||||||||||||||||| |||| Sbjct: 2041 tagaacttgttctggaactccacccagtgtagcc 2008
>gb|BC078964.1| Rattus norvegicus cDNA clone IMAGE:7111385, **** WARNING: chimeric clone **** Length = 2161 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 391 atagaacttgttctggaactccacccagtg 420 |||||||||||||||||||||||||||||| Sbjct: 2021 atagaacttgttctggaactccacccagtg 1992
>ref|NM_016921.2| Mus musculus T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3 (Tcirg1), mRNA Length = 2751 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 391 atagaacttgttctggaactccacccagtg 420 |||||||||||||||||||||||||||||| Sbjct: 2611 atagaacttgttctggaactccacccagtg 2582
>gb|BC114743.1| Bos taurus cDNA clone MGC:137911 IMAGE:8083238, complete cds Length = 2811 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtggagcc 425 ||||||||||||||||||||||||||||| |||| Sbjct: 2525 tagaacttgttctggaactccacccagtgcagcc 2492
>gb|BC061859.1| Rattus norvegicus T-cell, immune regulator 1, mRNA (cDNA clone MGC:72583 IMAGE:5598499), complete cds Length = 2454 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 391 atagaacttgttctggaactccacccagtg 420 |||||||||||||||||||||||||||||| Sbjct: 2310 atagaacttgttctggaactccacccagtg 2281
>gb|AC020983.8| Homo sapiens chromosome 7 clone RP11-269N18, complete sequence Length = 174378 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 371 aacttgtaaccatcaccctcatagaacttgttctggaactccaccc 416 |||||||||||||| || |||||||||||||||||||||| |||| Sbjct: 122463 aacttgtaaccatccccgacatagaacttgttctggaactcaaccc 122508
>dbj|AK155140.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630203K02 product:T-cell, immune regulator 1, full insert sequence Length = 3031 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 391 atagaacttgttctggaactccacccagtg 420 |||||||||||||||||||||||||||||| Sbjct: 2918 atagaacttgttctggaactccacccagtg 2889
>ref|NM_199089.2| Rattus norvegicus T-cell, immune regulator 1 (Tcirg1), mRNA Length = 2505 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 391 atagaacttgttctggaactccacccagtg 420 |||||||||||||||||||||||||||||| Sbjct: 2451 atagaacttgttctggaactccacccagtg 2422
>gb|BC085234.1| Mus musculus T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3, mRNA (cDNA clone MGC:102475 IMAGE:5322429), complete cds Length = 2626 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 391 atagaacttgttctggaactccacccagtg 420 |||||||||||||||||||||||||||||| Sbjct: 2471 atagaacttgttctggaactccacccagtg 2442
>gb|BC006761.1| Mus musculus T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3, mRNA (cDNA clone MGC:6328 IMAGE:3257437), complete cds Length = 2751 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 391 atagaacttgttctggaactccacccagtg 420 |||||||||||||||||||||||||||||| Sbjct: 2611 atagaacttgttctggaactccacccagtg 2582
>dbj|AK004094.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110034K16 product:ATPASE, H+ TRANSPORTING, LYSOSOMAL I (FRAGMENT), full insert sequence Length = 1537 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 391 atagaacttgttctggaactccacccagtg 420 |||||||||||||||||||||||||||||| Sbjct: 1421 atagaacttgttctggaactccacccagtg 1392
>gb|DQ286426.1| Rattus norvegicus v-H+ATPase subunit a3 mRNA, complete cds Length = 2505 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 391 atagaacttgttctggaactccacccagtg 420 |||||||||||||||||||||||||||||| Sbjct: 2451 atagaacttgttctggaactccacccagtg 2422
>ref|XM_574593.1| PREDICTED: Rattus norvegicus T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein a isoform 3 (Tcirg1), mRNA Length = 2671 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 391 atagaacttgttctggaactccacccagtg 420 |||||||||||||||||||||||||||||| Sbjct: 2554 atagaacttgttctggaactccacccagtg 2525
>gb|AC018663.3|AC018663 Human Chromosome 7 clone RP11-288A3, complete sequence Length = 170423 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 371 aacttgtaaccatcaccctcatagaacttgttctggaactccaccc 416 |||||||||||||| || |||||||||||||||||||||| |||| Sbjct: 15963 aacttgtaaccatccccgacatagaacttgttctggaactcaaccc 16008
>gb|AF218254.1|AF218254 Mus musculus vacuolar proton-translocating ATPase 100 kDa subunit isoform a3 mRNA, partial cds Length = 2368 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 391 atagaacttgttctggaactccacccagtg 420 |||||||||||||||||||||||||||||| Sbjct: 2232 atagaacttgttctggaactccacccagtg 2203
>gb|AF218253.1|AF218253 Mus musculus vacuolar proton-translocating ATPase 100 kDa subunit isoform a3 mRNA, complete cds Length = 2709 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 391 atagaacttgttctggaactccacccagtg 420 |||||||||||||||||||||||||||||| Sbjct: 2549 atagaacttgttctggaactccacccagtg 2520
>dbj|AB022322.1| Mus musculus mRNA for a3 subunit of vacuolar-adenosine triphosphatase, complete cds Length = 2593 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 391 atagaacttgttctggaactccacccagtg 420 |||||||||||||||||||||||||||||| Sbjct: 2477 atagaacttgttctggaactccacccagtg 2448
>ref|NM_174754.2| Bos taurus ATPase, H+ transporting, lysosomal V0 subunit a isoform 1 (ATP6V0A1), mRNA Length = 3151 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 ||||||||||||||||||||||||||||| Sbjct: 2580 tagaacttgttctggaactccacccagtg 2552
>gb|L31770.1|BOVVHAS Bos taurus vacuolar H+-ATPase subunit mRNA, complete cds Length = 3151 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 ||||||||||||||||||||||||||||| Sbjct: 2580 tagaacttgttctggaactccacccagtg 2552
>ref|NM_080467.2| Mus musculus ATPase, H+ transporting, lysosomal V0 subunit A4 (Atp6v0a4), mRNA Length = 3318 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 386 ccctcatagaacttgttctggaactccaccca 417 ||||||||||||||||||||||| |||||||| Sbjct: 2702 ccctcatagaacttgttctggaattccaccca 2671
>gb|AF435090.1| Mus musculus vacuolar proton translocating ATPase a4 isoform mRNA, complete cds Length = 3318 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 386 ccctcatagaacttgttctggaactccaccca 417 ||||||||||||||||||||||| |||||||| Sbjct: 2702 ccctcatagaacttgttctggaattccaccca 2671
>gb|AC113501.7| Mus musculus chromosome 6, clone RP23-367E20, complete sequence Length = 196932 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 386 ccctcatagaacttgttctggaactccacccagtgg 421 ||||||||||||||||||||||| ||||||| |||| Sbjct: 192072 ccctcatagaacttgttctggaattccaccctgtgg 192107
>gb|AC157667.11| Mus musculus 6 BAC RP24-86B22 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 206878 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 386 ccctcatagaacttgttctggaactccacccagtgg 421 ||||||||||||||||||||||| ||||||| |||| Sbjct: 171796 ccctcatagaacttgttctggaattccaccctgtgg 171761
>gb|AF326316.1|AF326316 Mus musculus H-ATPase accessory subunit a4 mRNA, complete cds Length = 2661 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 386 ccctcatagaacttgttctggaactccaccca 417 ||||||||||||||||||||||| |||||||| Sbjct: 2508 ccctcatagaacttgttctggaattccaccca 2477
>gb|BC046979.1| Mus musculus ATPase, H+ transporting, lysosomal V0 subunit A4, mRNA (cDNA clone MGC:54824 IMAGE:6315485), complete cds Length = 3323 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 386 ccctcatagaacttgttctggaactccaccca 417 ||||||||||||||||||||||| |||||||| Sbjct: 2736 ccctcatagaacttgttctggaattccaccca 2705
>dbj|AB050903.1| Mus musculus mRNA for a4 subunit isoform, complete cds Length = 3014 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 386 ccctcatagaacttgttctggaactccaccca 417 ||||||||||||||||||||||| |||||||| Sbjct: 2440 ccctcatagaacttgttctggaattccaccca 2409
>ref|XM_522295.1| PREDICTED: Pan troglodytes T-cell, immune regulator 1 (LOC466895), mRNA Length = 1440 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtggagcctcagg 430 ||||||||||||||||| ||||||||||| |||| |||| Sbjct: 1385 tagaacttgttctggaattccacccagtgcagccgcagg 1347
>gb|BC032465.1| Homo sapiens T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3, transcript variant 1, mRNA (cDNA clone MGC:40548 IMAGE:5210733), complete cds Length = 2722 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtggagcctcagg 430 ||||||||||||||||| ||||||||||| |||| |||| Sbjct: 2539 tagaacttgttctggaattccacccagtgcagccgcagg 2501
>gb|BC018133.1| Homo sapiens T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3, transcript variant 1, mRNA (cDNA clone MGC:9307 IMAGE:3905446), complete cds Length = 2691 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtggagcctcagg 430 ||||||||||||||||| ||||||||||| |||| |||| Sbjct: 2546 tagaacttgttctggaattccacccagtgcagccgcagg 2508
>emb|CR602058.1| full-length cDNA clone CS0DI059YF06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1655 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtggagcctcagg 430 ||||||||||||||||| ||||||||||| |||| |||| Sbjct: 1551 tagaacttgttctggaattccacccagtgcagccgcagg 1513
>emb|CR599870.1| full-length cDNA clone CS0DI006YO09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 671 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtggagcctcagg 430 ||||||||||||||||| ||||||||||| |||| |||| Sbjct: 540 tagaacttgttctggaattccacccagtgcagccgcagg 502
>emb|CR594613.1| full-length cDNA clone CS0DD004YI18 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1864 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtggagcctcagg 430 ||||||||||||||||| ||||||||||| |||| |||| Sbjct: 1750 tagaacttgttctggaattccacccagtgcagccgcagg 1712
>ref|NM_006019.2| Homo sapiens T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3 (TCIRG1), transcript variant 1, mRNA Length = 2700 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtggagcctcagg 430 ||||||||||||||||| ||||||||||| |||| |||| Sbjct: 2546 tagaacttgttctggaattccacccagtgcagccgcagg 2508
>ref|NM_006053.2| Homo sapiens T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3 (TCIRG1), transcript variant 2, mRNA Length = 2480 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtggagcctcagg 430 ||||||||||||||||| ||||||||||| |||| |||| Sbjct: 2326 tagaacttgttctggaattccacccagtgcagccgcagg 2288
>gb|AY108620.1| Zea mays PCO149515 mRNA sequence Length = 733 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 370 gaacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 420 ||||||||||||||| || | ||||||||||||| |||||| |||||||| Sbjct: 274 gaacttgtaaccatccccatgatagaacttgttcatgaactcaacccagtg 224
>gb|AF025374.1|AF025374 Homo sapiens T cell immune response cDNA7 (TIRC7) mRNA, complete cds Length = 2488 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtggagcctcagg 430 ||||||||||||||||| ||||||||||| |||| |||| Sbjct: 2326 tagaacttgttctggaattccacccagtgcagccgcagg 2288
>dbj|AP006110.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT39G11, TM0195b, complete sequence Length = 52245 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 370 gaacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 420 ||||||||||||||| |||| ||| || |||||||| ||||| |||||||| Sbjct: 21860 gaacttgtaaccatctccctgataaaatttgttctgaaactcaacccagtg 21810
>gb|U45285.1|HSU45285 Human specific 116-kDa vacuolar proton pump subunit (OC-116KDa) mRNA, complete cds Length = 2655 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtggagcctcagg 430 ||||||||||||||||| ||||||||||| |||| |||| Sbjct: 2492 tagaacttgttctggaattccacccagtgcagccgcagg 2454
>gb|BT013720.1| Lycopersicon esculentum clone 132568R, mRNA sequence Length = 3001 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 371 aacttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 420 |||||||| ||||| ||||| || ||||| || ||||||||||||||||| Sbjct: 2466 aacttgtatccatctccctcgtaaaacttattttggaactccacccagtg 2417
>emb|AJ893357.1| Phytophthora infestans, clone PI-BAC-49P21 Length = 137298 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 395 aacttgttctggaactccacccagtg 420 |||||||||||||||||||||||||| Sbjct: 51061 aacttgttctggaactccacccagtg 51036
>gb|AC133523.3| Mus musculus BAC clone RP23-34E20 from 19, complete sequence Length = 250866 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 391 atagaacttgttctggaactccaccc 416 |||||||||||||||||||||||||| Sbjct: 133049 atagaacttgttctggaactccaccc 133074
>gb|AF188702.1|AF188702 Mus musculus osteoclast-specific 116-kDa V-ATPase subunit (Oc116) gene, complete cds Length = 11046 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 391 atagaacttgttctggaactccaccc 416 |||||||||||||||||||||||||| Sbjct: 10930 atagaacttgttctggaactccaccc 10905
>dbj|AK159114.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420002E01 product:ATPase, H+ transporting, lysosomal V0 subunit a isoform 1, full insert sequence Length = 3920 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 ||||| ||||||||||||||||||||||| Sbjct: 2542 tagaatttgttctggaactccacccagtg 2514
>dbj|AK158786.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K430310H14 product:ATPase, H+ transporting, lysosomal V0 subunit a isoform 1, full insert sequence Length = 3794 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 ||||| ||||||||||||||||||||||| Sbjct: 2414 tagaatttgttctggaactccacccagtg 2386
>gb|BC071182.1| Mus musculus ATPase, H+ transporting, lysosomal V0 subunit A1, mRNA (cDNA clone MGC:76459 IMAGE:30101184), complete cds Length = 3980 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 ||||| ||||||||||||||||||||||| Sbjct: 2571 tagaatttgttctggaactccacccagtg 2543
>gb|BC066839.1| Mus musculus ATPase, H+ transporting, lysosomal V0 subunit A1, mRNA (cDNA clone MGC:76633 IMAGE:30101340), complete cds Length = 3980 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 ||||| ||||||||||||||||||||||| Sbjct: 2571 tagaatttgttctggaactccacccagtg 2543
>ref|NM_016920.2| Mus musculus ATPase, H+ transporting, lysosomal V0 subunit A1 (Atp6v0a1), mRNA Length = 4000 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 ||||| ||||||||||||||||||||||| Sbjct: 2621 tagaatttgttctggaactccacccagtg 2593
>dbj|AK217103.1| Mus musculus cDNA, clone:Y2G0140K13, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000044721, based on BLAT search Length = 347 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 ||||| ||||||||||||||||||||||| Sbjct: 35 tagaatttgttctggaactccacccagtg 7
>dbj|AK178418.1| Mus musculus cDNA, clone:Y0G0106K07, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000044721, based on BLAT search Length = 346 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 ||||| ||||||||||||||||||||||| Sbjct: 35 tagaatttgttctggaactccacccagtg 7
>dbj|AK177991.1| Mus musculus cDNA, clone:Y0G0105A14, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000044721, based on BLAT search Length = 175 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 ||||| ||||||||||||||||||||||| Sbjct: 35 tagaatttgttctggaactccacccagtg 7
>dbj|AK177315.1| Mus musculus cDNA, clone:Y0G0102F17, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000044721, based on BLAT search Length = 473 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 ||||| ||||||||||||||||||||||| Sbjct: 35 tagaatttgttctggaactccacccagtg 7
>gb|AF218251.1|AF218251 Mus musculus vacuolar proton-translocating ATPase 100 kDa subunit isoform a1-III mRNA, complete cds Length = 2499 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 ||||| ||||||||||||||||||||||| Sbjct: 2429 tagaatttgttctggaactccacccagtg 2401
>gb|AF218250.1|AF218250 Mus musculus vacuolar proton-translocating ATPase 100 kDa subunit isoform a1-II mRNA, complete cds Length = 2520 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 ||||| ||||||||||||||||||||||| Sbjct: 2450 tagaatttgttctggaactccacccagtg 2422
>gb|AF218249.1|AF218249 Mus musculus vacuolar proton-translocating ATPase 100 kDa subunit isoform a1-I mRNA, complete cds Length = 3999 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 ||||| ||||||||||||||||||||||| Sbjct: 2594 tagaatttgttctggaactccacccagtg 2566
>gb|U13836.1|MMU13836 Mus musculus vacuolar adenosine triphosphatase subunit Ac116 mRNA, complete cds Length = 2557 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 ||||| ||||||||||||||||||||||| Sbjct: 2468 tagaatttgttctggaactccacccagtg 2440
>emb|AJ249390.1|MSE249390 Manduca sexta mRNA for vacuolar ATPase subunit a (mva gene) Length = 3586 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 ||||||||| ||||||||||||||||||| Sbjct: 2588 tagaacttgctctggaactccacccagtg 2560
>dbj|AB022321.1| Mus musculus mRNA for vacuolar-adenosine trisphosphatase (V-ATPase), complete cds Length = 3815 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 ||||| ||||||||||||||||||||||| Sbjct: 2435 tagaatttgttctggaactccacccagtg 2407
>gb|BC060417.1| Xenopus laevis hypothetical protein MGC68661, mRNA (cDNA clone MGC:68661 IMAGE:4032775), complete cds Length = 3296 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 395 aacttgttctggaactccacccagtggagcct 426 |||||||||||||| || |||||||||||||| Sbjct: 2670 aacttgttctggaattcaacccagtggagcct 2639
>ref|NM_166313.1| Drosophila melanogaster Vha100-3 CG30329-RA (Vha100-3), mRNA Length = 2715 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 403 ctggaactccacccagtggagcctcagg 430 ||||||||||||||||||||||| |||| Sbjct: 2643 ctggaactccacccagtggagccgcagg 2616
>gb|AC099016.1| Drosophila melanogaster, chromosome 2R, region 56A-56A, BAC clone BACR27C21, complete sequence Length = 173373 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 403 ctggaactccacccagtggagcctcagg 430 ||||||||||||||||||||||| |||| Sbjct: 138778 ctggaactccacccagtggagccgcagg 138805
>ref|XM_702948.1| PREDICTED: Danio rerio similar to Vacuolar proton translocating ATPase 116 kDa subunit a isoform 2 (V-ATPase 116-kDa isoform a2) (Immune suppressor factor J6B7), transcript variant 3 (LOC561117), mRNA Length = 3497 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtggag 423 |||||||| ||||| ||||||||||||||||| Sbjct: 2441 tagaacttattctgaaactccacccagtggag 2410
>ref|XM_680526.1| PREDICTED: Danio rerio similar to Vacuolar proton translocating ATPase 116 kDa subunit a isoform 2 (V-ATPase 116-kDa isoform a2) (Immune suppressor factor J6B7), transcript variant 1 (LOC561117), mRNA Length = 3530 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtggag 423 |||||||| ||||| ||||||||||||||||| Sbjct: 2474 tagaacttattctgaaactccacccagtggag 2443
>ref|XM_681374.1| PREDICTED: Danio rerio similar to Vacuolar proton translocating ATPase 116 kDa subunit a isoform 2 (V-ATPase 116-kDa isoform a2) (Immune suppressor factor J6B7) (LOC562096), mRNA Length = 3495 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtggag 423 |||||||| ||||| ||||||||||||||||| Sbjct: 2441 tagaacttattctgaaactccacccagtggag 2410
>ref|XM_680945.1| PREDICTED: Danio rerio similar to Vacuolar proton translocating ATPase 116 kDa subunit a isoform 2 (V-ATPase 116-kDa isoform a2) (Immune suppressor factor J6B7), transcript variant 1 (LOC561869), mRNA Length = 3495 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtggag 423 |||||||| ||||| ||||||||||||||||| Sbjct: 2441 tagaacttattctgaaactccacccagtggag 2410
>gb|AC008188.4|AC008188 Drosophila melanogaster, chromosome 2R, region 56A2-56B1, BAC clone BACR08I18, complete sequence Length = 160650 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 403 ctggaactccacccagtggagcctcagg 430 ||||||||||||||||||||||| |||| Sbjct: 5147 ctggaactccacccagtggagccgcagg 5174
>ref|XM_231615.3| PREDICTED: Rattus norvegicus ATPase, H+ transporting, lysosomal V0 subunit A isoform 4 (predicted) (Atp6v0a4_predicted), mRNA Length = 3273 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 386 ccctcatagaacttgttctggaactccaccca 417 ||||| ||||||||||||||||| |||||||| Sbjct: 2726 ccctcgtagaacttgttctggaattccaccca 2695
>gb|AE003797.3| Drosophila melanogaster chromosome 2R, section 53 of 73 of the complete sequence Length = 306854 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 403 ctggaactccacccagtggagcctcagg 430 ||||||||||||||||||||||| |||| Sbjct: 37437 ctggaactccacccagtggagccgcagg 37464
>gb|BT001264.1| Drosophila melanogaster AT03238 full insert cDNA Length = 2488 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 403 ctggaactccacccagtggagcctcagg 430 ||||||||||||||||||||||| |||| Sbjct: 2315 ctggaactccacccagtggagccgcagg 2288
>gb|AC004322.1|AC004322 Drosophila melanogaster DNA sequence (P1 DS01962 (D216)), complete sequence Length = 32480 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 403 ctggaactccacccagtggagcctcagg 430 ||||||||||||||||||||||| |||| Sbjct: 10376 ctggaactccacccagtggagccgcagg 10403
>dbj|AK085834.1| Mus musculus 16 days neonate heart cDNA, RIKEN full-length enriched library, clone:D830015E21 product:unclassifiable, full insert sequence Length = 2776 Score = 46.1 bits (23), Expect = 0.100 Identities = 23/23 (100%) Strand = Plus / Minus Query: 21 ttttattacatgcttatttatat 43 ||||||||||||||||||||||| Sbjct: 965 ttttattacatgcttatttatat 943
>gb|AC156272.6| Mus musculus 10 BAC RP24-244K5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 166962 Score = 46.1 bits (23), Expect = 0.100 Identities = 23/23 (100%) Strand = Plus / Minus Query: 21 ttttattacatgcttatttatat 43 ||||||||||||||||||||||| Sbjct: 111652 ttttattacatgcttatttatat 111630
>ref|XM_954818.1| Neurospora crassa OR74A hypothetical protein (NCU02267.1) partial mRNA Length = 1821 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 266 ggcaacaaggccacccgcaagg 287 |||||||||||||||||||||| Sbjct: 183 ggcaacaaggccacccgcaagg 162
>ref|XM_331042.1| Neurospora crassa OR74A hypothetical protein (NCU02267.1) partial mRNA Length = 1821 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 266 ggcaacaaggccacccgcaagg 287 |||||||||||||||||||||| Sbjct: 183 ggcaacaaggccacccgcaagg 162
>ref|XM_543370.2| PREDICTED: Canis familiaris similar to ATPase, H+ transporting, lysosomal V0 subunit a isoform 2, transcript variant 1 (LOC486245), mRNA Length = 3051 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 390 catagaacttgttctggaactccacccagtggag 423 |||||||||||||||| || || ||||||||||| Sbjct: 2639 catagaacttgttctgaaattctacccagtggag 2606
>emb|CR674876.2|CNS0FJPE Tetraodon nigroviridis full-length cDNA Length = 1344 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 395 aacttgttctggaactccacccagtg 420 |||||||| ||||||||||||||||| Sbjct: 766 aacttgttttggaactccacccagtg 741
>emb|BX908789.1| Neurospora crassa DNA linkage group VII BAC clone B13D24 Length = 107482 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 266 ggcaacaaggccacccgcaagg 287 |||||||||||||||||||||| Sbjct: 43798 ggcaacaaggccacccgcaagg 43777
>gb|BC095691.1| Danio rerio zgc:112214, mRNA (cDNA clone MGC:112214 IMAGE:7435771), complete cds Length = 2930 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccaccca 417 ||||| |||||||||||||||||||| Sbjct: 2562 tagaatttgttctggaactccaccca 2537
>emb|CR846083.9| Zebrafish DNA sequence from clone DKEYP-34A6 in linkage group 14, complete sequence Length = 163337 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 tttattacatgcttatttatat 43 |||||||||||||||||||||| Sbjct: 161153 tttattacatgcttatttatat 161132
>emb|BX294444.7| Zebrafish DNA sequence from clone CH211-281E15 in linkage group 14, complete sequence Length = 169694 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 tttattacatgcttatttatat 43 |||||||||||||||||||||| Sbjct: 151713 tttattacatgcttatttatat 151692
>ref|NM_001020666.1| Danio rerio zgc:112214 (zgc:112214), mRNA Length = 2930 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccaccca 417 ||||| |||||||||||||||||||| Sbjct: 2562 tagaatttgttctggaactccaccca 2537
>emb|BX284110.16| Zebrafish DNA sequence from clone DKEYP-67D7 in linkage group 10, complete sequence Length = 179798 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 22 tttattacatgcttatttatat 43 |||||||||||||||||||||| Sbjct: 58168 tttattacatgcttatttatat 58189
>emb|AL935277.6| Zebrafish DNA sequence from clone CH211-250C16, complete sequence Length = 69315 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 22 tttattacatgcttatttatat 43 |||||||||||||||||||||| Sbjct: 48453 tttattacatgcttatttatat 48474
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 tacccttcgtgtaatccacat 180 ||||||||||||||||||||| Sbjct: 2851603 tacccttcgtgtaatccacat 2851623
>gb|BC066692.1| Danio rerio ATPase, H+ transporting, lysosomal V0 subunit a isoform 1, mRNA (cDNA clone MGC:76965 IMAGE:6525336), complete cds Length = 3570 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 ||||| || |||||||||||||||||||| Sbjct: 2509 tagaatttattctggaactccacccagtg 2481
>gb|AC109276.12| Mus musculus chromosome 1, clone RP23-461J11, complete sequence Length = 173589 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 219 aggggctggggttttatgatt 239 ||||||||||||||||||||| Sbjct: 47452 aggggctggggttttatgatt 47472
>ref|XM_759274.1| Theileria parva strain Muguga chromosome 4 vacuolar ATP synthase subunit A (TP04_0731) partial mRNA Length = 2811 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 393 agaacttgttctggaactccaccca 417 ||||||||||||||||||| ||||| Sbjct: 2731 agaacttgttctggaactcaaccca 2707
>ref|XM_948273.1| Theileria annulata strain Ankara vacuolar H+-ATPase, 116 kDa subunit (TA10280) partial mRNA Length = 2811 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 393 agaacttgttctggaactccaccca 417 ||||||||||||||||||| ||||| Sbjct: 2731 agaacttgttctggaactcaaccca 2707
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 tacccttcgtgtaatccacat 180 ||||||||||||||||||||| Sbjct: 3161371 tacccttcgtgtaatccacat 3161391
>ref|NM_031604.2| Rattus norvegicus ATPase, H+ transporting, lysosomal V0 subunit A1 (Atp6v0a1), mRNA Length = 4006 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 ||||| ||||||||||| ||||||||||| Sbjct: 2605 tagaatttgttctggaattccacccagtg 2577
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 tacccttcgtgtaatccacat 180 ||||||||||||||||||||| Sbjct: 3040344 tacccttcgtgtaatccacat 3040364
>gb|AC034259.7| Homo sapiens chromosome 11, clone RP11-138N3, complete sequence Length = 206192 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 392 tagaacttgttctggaactccaccc 416 ||||||||||||||||| ||||||| Sbjct: 34241 tagaacttgttctggaattccaccc 34265
>gb|AC107965.4| Homo sapiens chromosome 8, clone CTD-2332A4, complete sequence Length = 112032 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 ttattacatgcttatttatat 43 ||||||||||||||||||||| Sbjct: 35046 ttattacatgcttatttatat 35066
>gb|AC021760.9| Homo sapiens chromosome 8, clone RP11-433L7, complete sequence Length = 183059 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 ttattacatgcttatttatat 43 ||||||||||||||||||||| Sbjct: 3429 ttattacatgcttatttatat 3409
>emb|BX294185.5| Zebrafish DNA sequence from clone CH211-232L14 in linkage group 24, complete sequence Length = 115427 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 392 tagaacttgttctggaactccaccc 416 ||||| ||||||||||||||||||| Sbjct: 49581 tagaatttgttctggaactccaccc 49605
>gb|AY973541.1|AY973542S2 Hyaloperonospora parasitica isolate Emoy2 clone BAC 12I13, SP6 end Length = 57064 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 ||||| ||||||||||| ||||||||||| Sbjct: 3906 tagaatttgttctggaattccacccagtg 3878
>emb|BX284616.13| Zebrafish DNA sequence from clone DKEY-192I20 in linkage group 19, complete sequence Length = 223573 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 tttattacatgcttatttatatcca 46 |||||||||||| |||||||||||| Sbjct: 51607 tttattacatgcatatttatatcca 51631
>gb|AC069014.21|AC069014 Mus musculus 11 BAC RP23-278K23 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 181557 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccaccc 416 ||||| ||||||||||||||||||| Sbjct: 126408 tagaatttgttctggaactccaccc 126384
>gb|DQ286424.1| Rattus norvegicus v-H+ATPase subunit a1-III mRNA, complete cds Length = 2499 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 ||||| ||||||||||| ||||||||||| Sbjct: 2429 tagaatttgttctggaattccacccagtg 2401
>gb|DQ286423.1| Rattus norvegicus v-H+ATPase subunit a1-II mRNA, complete cds Length = 2520 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 ||||| ||||||||||| ||||||||||| Sbjct: 2450 tagaatttgttctggaattccacccagtg 2422
>gb|DQ286422.1| Rattus norvegicus v-H+ATPase subunit a1-IV mRNA, complete cds Length = 2538 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 ||||| ||||||||||| ||||||||||| Sbjct: 2468 tagaatttgttctggaattccacccagtg 2440
>gb|DQ286421.1| Rattus norvegicus v-H+ATPase subunit a1-I mRNA, complete cds Length = 2517 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 ||||| ||||||||||| ||||||||||| Sbjct: 2447 tagaatttgttctggaattccacccagtg 2419
>gb|AY548972.1| Homo sapiens T-cell immune regulator 1 transcript variant 9 (TCIRG1) mRNA, partial sequence; alternatively spliced Length = 223 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccaccc 416 ||||||||||||||||| ||||||| Sbjct: 166 tagaacttgttctggaattccaccc 142
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 tacccttcgtgtaatccacat 180 ||||||||||||||||||||| Sbjct: 2846307 tacccttcgtgtaatccacat 2846327
>dbj|AK208548.1| Mus musculus cDNA, clone:Y2G0111O18, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000044721, based on BLAT search Length = 165 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 398 ttgttctggaactccacccag 418 ||||||||||||||||||||| Sbjct: 29 ttgttctggaactccacccag 9
>emb|AJ289019.1|GGA289019 Gallus gallus mRNA for vacuolar H(+)-transporting ATPase 116 kDa subunit, a1 isoform (a1 gene) Length = 2648 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 |||||||||||||||||||| | |||||| Sbjct: 2503 tagaacttgttctggaactcgatccagtg 2475
>ref|XM_313509.2| Anopheles gambiae str. PEST ENSANGP00000022715 (ENSANGG00000000403), partial mRNA Length = 2981 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 |||||||| ||||||||||||||||||| Sbjct: 2474 tagaacttactctggaactccacccagtg 2446
>ref|XM_562586.1| Anopheles gambiae str. PEST ENSANGP00000027730 (ENSANGG00000000403), mRNA Length = 3297 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 |||||||| ||||||||||||||||||| Sbjct: 2604 tagaacttactctggaactccacccagtg 2576
>ref|XM_313510.2| Anopheles gambiae str. PEST ENSANGP00000000428 (ENSANGG00000000403), partial mRNA Length = 2612 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 |||||||| ||||||||||||||||||| Sbjct: 2533 tagaacttactctggaactccacccagtg 2505
>ref|NM_204724.1| Gallus gallus ATPase, H+ transporting, lysosomal V0 subunit A1 (ATP6V0A1), mRNA Length = 2601 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 |||||||||||||||||||| | |||||| Sbjct: 2503 tagaacttgttctggaactcgatccagtg 2475
>gb|AF033033.2|AF033033 Homo sapiens TIRC7 protein (TCIRG1) gene, complete cds Length = 12234 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccaccc 416 ||||||||||||||||| ||||||| Sbjct: 11788 tagaacttgttctggaattccaccc 11764
>emb|AL591425.4| Mouse DNA sequence from clone RP23-278K23 on chromosome 11, complete sequence Length = 75415 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccaccc 416 ||||| ||||||||||||||||||| Sbjct: 68422 tagaatttgttctggaactccaccc 68398
>ref|NM_212672.1| Danio rerio ATPase, H+ transporting, lysosomal V0 subunit a isoform 1 (atp6v0a1), mRNA Length = 3570 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 ||||| || |||||||||||||||||||| Sbjct: 2509 tagaatttattctggaactccacccagtg 2481
>gb|M58758.1|RATPRPU Rat proton pump polypeptide mRNA, complete cds Length = 3876 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacccagtg 420 ||||| ||||||||||| ||||||||||| Sbjct: 2477 tagaatttgttctggaattccacccagtg 2449
>dbj|AP002807.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-802E16, complete sequences Length = 63433 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccaccc 416 ||||||||||||||||| ||||||| Sbjct: 22176 tagaacttgttctggaattccaccc 22152
>gb|AC149302.1| Solanum demissum chromosome 11 clone PGEC400L14 map MAP_LOC, complete sequence Length = 136874 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 430 gcatgaaggaatgcacttagggtctcca 457 ||||||||||||||||| || ||||||| Sbjct: 95865 gcatgaaggaatgcactaagagtctcca 95838
>gb|AY973631.1| Oncidium Gower Ramsey phytoene synthase mRNA, complete cds Length = 1383 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 306 agatacaagaatttggacgagctc 329 |||||||||||||| ||||||||| Sbjct: 737 agatacaagaatttcgacgagctc 760
>ref|NM_204722.1| Gallus gallus T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein a isoform 3 (TCIRG1), mRNA Length = 2878 Score = 40.1 bits (20), Expect = 6.2 Identities = 41/48 (85%) Strand = Plus / Minus Query: 373 cttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 420 |||||| ||| ||||| | || ||||| ||||| |||||||||||||| Sbjct: 2665 cttgtagccagcacccacgtaaaacttattctgaaactccacccagtg 2618
>gb|DQ011154.1| Monkeypox virus strain Congo_2003_358, complete genome Length = 197195 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 172 aatccacatctaaagaaaaatgat 195 |||| ||||||||||||||||||| Sbjct: 33380 aatcaacatctaaagaaaaatgat 33403
>gb|AY496865.1| Oncidium cv. 'Gower Ramsey' phytoene synthase (PSY) mRNA, complete cds Length = 1576 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 306 agatacaagaatttggacgagctc 329 |||||||||||||| ||||||||| Sbjct: 781 agatacaagaatttcgacgagctc 804
>emb|AL590675.3| Human DNA sequence from clone RP11-297O16 on chromosome 6, complete sequence Length = 48306 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 aaataaccttttattacatgctta 36 |||||||||||||||| ||||||| Sbjct: 18561 aaataaccttttattaaatgctta 18584
>emb|AL031407.3|HS436K10 Human DNA sequence from clone RP3-436K10 on chromosome 6p22.1-23, complete sequence Length = 165139 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 acaaaaaagttcctaccctt 166 |||||||||||||||||||| Sbjct: 15308 acaaaaaagttcctaccctt 15289
>gb|AF497545.1| Homo sapiens T-cell immune regulator 1 transcript variant 3 (TCIRG1) mRNA, partial cds, alternatively spliced Length = 220 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 392 tagaacttgttctggaactccacc 415 ||||||||||||||||| |||||| Sbjct: 163 tagaacttgttctggaattccacc 140
>gb|AF438327.1| Homo sapiens alpha 1 type XXI collagen precursor (COL21A1) gene, complete cds, alternatively spliced Length = 381696 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 aaataaccttttattacatgctta 36 |||||||||||||||| ||||||| Sbjct: 106905 aaataaccttttattaaatgctta 106882
>gb|AC020593.6| Homo sapiens BAC clone RP11-317G22 from 4, complete sequence Length = 184206 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 acatctaaagaaaaatgatg 196 |||||||||||||||||||| Sbjct: 163750 acatctaaagaaaaatgatg 163731
>gb|AC012613.7| Homo sapiens chromosome 5 clone CTB-162I23, complete sequence Length = 164550 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 ccagtggagcctcaggcatg 434 |||||||||||||||||||| Sbjct: 160744 ccagtggagcctcaggcatg 160763
>gb|AC127684.5| Mus musculus BAC clone RP24-171J12 from chromosome 6, complete sequence Length = 178299 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 acatctaaagaaaaatgatg 196 |||||||||||||||||||| Sbjct: 26172 acatctaaagaaaaatgatg 26191
>gb|AC083949.3| Homo sapiens BAC clone CTD-2096A9 from 2, complete sequence Length = 109296 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 aaaaaagttcctacccttcg 168 |||||||||||||||||||| Sbjct: 97806 aaaaaagttcctacccttcg 97787
>emb|AJ289021.1|GGA289021 Gallus gallus mRNA for vacuolar H(+)-transporting ATPase 116 kDa subunit, a3 isoform (a3 gene) Length = 2878 Score = 40.1 bits (20), Expect = 6.2 Identities = 41/48 (85%) Strand = Plus / Minus Query: 373 cttgtaaccatcaccctcatagaacttgttctggaactccacccagtg 420 |||||| ||| ||||| | || ||||| ||||| |||||||||||||| Sbjct: 2665 cttgtagccagcacccacgtaaaacttattctgaaactccacccagtg 2618
>emb|AJ330335.1|HSA330335 Homo sapiens genomic sequence surrounding NotI site, clone NL1-CM20R Length = 771 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 aaaaaagttcctacccttcg 168 |||||||||||||||||||| Sbjct: 251 aaaaaagttcctacccttcg 232
>emb|BX548072.14| Zebrafish DNA sequence from clone DKEYP-84A8 in linkage group 22, complete sequence Length = 188936 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tttattacatgcttatttat 41 |||||||||||||||||||| Sbjct: 84180 tttattacatgcttatttat 84199
>gb|AC156277.6| Mus musculus 6 BAC RP24-309B5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 152539 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 acatctaaagaaaaatgatg 196 |||||||||||||||||||| Sbjct: 127355 acatctaaagaaaaatgatg 127374 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,289,166 Number of Sequences: 3902068 Number of extensions: 4289166 Number of successful extensions: 72838 Number of sequences better than 10.0: 184 Number of HSP's better than 10.0 without gapping: 184 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 72466 Number of HSP's gapped (non-prelim): 355 length of query: 457 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 435 effective length of database: 17,147,199,772 effective search space: 7459031900820 effective search space used: 7459031900820 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
