>GLMS_TREPA (O83833) Glucosamine--fructose-6-phosphate aminotransferase|
           [isomerizing] (EC 2.6.1.16) (Hexosephosphate
           aminotransferase) (D-fructose-6-phosphate
           amidotransferase) (GFAT)
           (L-glutamine-D-fructose-6-phosphate amidotransferase)
           (Glucosamine-6-ph
          Length = 634

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -2

Query: 182 CN*LQSCLVARMDRHATCTHSGGHVGVELVVSFDLKLICICI 57
           CN  +S LV   D     TH+G  +GV    SF  +L+C+ +
Sbjct: 387 CNGARSTLVRESDA-VLLTHAGSEIGVASTKSFTTQLVCLLV 427

>SYR_TREPA (O83803) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA|
           ligase) (ArgRS)
          Length = 589

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -3

Query: 301 PSMACSEVKVVVTEDPSLCSYTSAFAGGPSKNIFI 197
           P+    ++  ++ ED S+C+Y +  A GP  N+F+
Sbjct: 60  PAQLAQQLCTLLEEDTSMCAYGTPQARGPYLNVFL 94

>PHSA_SALTY (P37600) Thiosulfate reductase precursor (EC 1.-.-.-)|
          Length = 758

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 25  SSKDVTFSTHLIHIQISLRSKDTTSSTPTCP 117
           SSK  + S+HL H+  +  S +T +   TCP
Sbjct: 145 SSKSGSLSSHLFHLATAFGSPNTFTHASTCP 175

>ENP1_BACSH (Q03415) Gamma-D-glutamyl-L-diamino acid endopeptidase 1 (EC|
           3.4.19.11) (Gamma-D-glutamyl-L-diamino acid
           endopeptidase I) (Gamma-D-glutamyl-meso-diaminopimelate
           peptidase I) (Endopeptidase I)
          Length = 396

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +3

Query: 156 NQTRLQLVTAL-VDGIKMFLDGPPAN 230
           NQT L LV  +  DG+ + ++GPPAN
Sbjct: 199 NQTTLSLVPMVNPDGVNLVINGPPAN 224

>COBB_PSEAE (Q9I471) Cobyrinic acid A,C-diamide synthase|
          Length = 435

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 347 EGNPLGFDLMRVFGVPQHGMLGG 279
           +GNP   DL R FGVP  G++ G
Sbjct: 98  DGNPSAADLARRFGVPVLGVING 120

>RDRP_PMV (P20951) RNA replication protein (176 kDa protein) (ORF 1 protein)|
           [Includes: RNA-directed RNA polymerase (EC 2.7.7.48);
           Helicase (EC 3.6.1.-)]
          Length = 1547

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -2

Query: 263 GGSFTMLLHLGICWWSIQKH 204
           GG F  L    I WW IQKH
Sbjct: 366 GGMFKKLFKPFIAWWEIQKH 385

>K6PF_DEIRA (Q9RWN1) 6-phosphofructokinase (EC 2.7.1.11) (Phosphofructokinase)|
           (Phosphohexokinase)
          Length = 329

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -2

Query: 362 NTTRS-EGNPLGFDLMRVFGVPQHGMLGGKGCRHGGSFTMLLH 237
           +T RS EG   G  ++R +GV    ++GG G  HGG F    H
Sbjct: 82  HTWRSPEGRAKGAAVLREWGVDGLVVIGGDGSFHGGYFLQEEH 124

>EMRD_ECOLI (P31442) Multidrug resistance protein D|
          Length = 394

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
 Frame = -3

Query: 229 FAGGPSKNIFIPSTRAVTNCNL----VWLPEWTGMPLVPTLV 116
           FAG P+K       ++V  C L    +W+P+W G+  V TL+
Sbjct: 262 FAGRPNKRFSTLMWQSVICCLLAGLLMWIPDWFGVMNVWTLL 303

>COMA_CONMA (Q9TWL9) Conodipine-M alpha chain (EC 3.1.1.4)|
          Length = 77

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -2

Query: 170 QSCLVARMDRHATCTHSGGHVG 105
           Q   +A  DRH TC H G H G
Sbjct: 26  QKXFLAACDRHDTCYHCGKHFG 47

>LSHB_HORSE (P08751) Lutropin/choriogonadotropin beta chain precursor|
           (LSH-B/CG-B) (Lutenizing hormone beta subunit)
          Length = 169

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -2

Query: 143 RHATCTHSGGHVGVELVVSFDLKLICICIKCVLKVTSLELIR 18
           R A+    G   GV+ +VSF + L C C  C +K T   + R
Sbjct: 83  RFASIRLPGCPPGVDPMVSFPVALSCHCGPCQIKTTDCGVFR 124


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,690,092
Number of Sequences: 219361
Number of extensions: 1356676
Number of successful extensions: 3581
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3581
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 1407308304
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)