ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl41h10 |
|---|---|
| Clone Library Name | barley_pub |
>SECA_ARATH (Q9SYI0) Preprotein translocase secA subunit, chloroplast precursor| Length = 1021 Score = 142 bits (358), Expect = 3e-34 Identities = 70/80 (87%), Positives = 75/80 (93%), Gaps = 1/80 (1%) Frame = -2 Query: 415 FLILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIY 236 FLILSNID+LWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFL+MMAQIRRNVIY Sbjct: 913 FLILSNIDRLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLEMMAQIRRNVIY 972 Query: 235 SVYQFQPV-MKKQEENSGKN 179 S+YQFQPV +KK EE +N Sbjct: 973 SIYQFQPVRVKKDEEKKSQN 992
>SECA_PEA (Q41062) Preprotein translocase secA subunit, chloroplast precursor| Length = 1011 Score = 142 bits (357), Expect = 4e-34 Identities = 67/79 (84%), Positives = 76/79 (96%) Frame = -2 Query: 415 FLILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIY 236 FLILSNID+LWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFL+MMAQIRRNVIY Sbjct: 903 FLILSNIDRLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLEMMAQIRRNVIY 962 Query: 235 SVYQFQPVMKKQEENSGKN 179 S+YQF+PV+ KQ+++ +N Sbjct: 963 SIYQFKPVLLKQDQDKMEN 981
>SECA_SPIOL (Q36795) Preprotein translocase secA subunit, chloroplast precursor| Length = 1036 Score = 139 bits (350), Expect = 3e-33 Identities = 69/83 (83%), Positives = 75/83 (90%), Gaps = 2/83 (2%) Frame = -2 Query: 415 FLILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIY 236 FLILSNID+LWKEHLQA+KFVQQAVGLRGYAQRDPLIEYKLEGYNLFL+MMAQIRRNVIY Sbjct: 924 FLILSNIDRLWKEHLQAIKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLEMMAQIRRNVIY 983 Query: 235 SVYQFQPVMKKQEE--NSGKNDS 173 S YQF+PV+ K +E GK DS Sbjct: 984 SAYQFKPVVVKNQEQQQKGKPDS 1006
>SECA_SYNY3 (Q55709) Preprotein translocase secA subunit| Length = 932 Score = 100 bits (250), Expect = 1e-21 Identities = 42/72 (58%), Positives = 59/72 (81%) Frame = -2 Query: 415 FLILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIY 236 + IL ID LW+EHLQ+++ +++++GLRGY Q+DPLIEYK EGY +FL+MM IRRNV+Y Sbjct: 859 YFILQQIDNLWREHLQSMEALRESIGLRGYGQKDPLIEYKQEGYEMFLEMMIDIRRNVVY 918 Query: 235 SVYQFQPVMKKQ 200 S++QFQP + Q Sbjct: 919 SLFQFQPQQQPQ 930
>SECA_SYNP7 (Q55357) Preprotein translocase secA subunit| Length = 948 Score = 97.4 bits (241), Expect = 1e-20 Identities = 42/67 (62%), Positives = 55/67 (82%) Frame = -2 Query: 415 FLILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIY 236 + IL ID LW+EHLQA++ ++++VGLRGY Q+DPL+EYK EGY LFL+MM IRRNVIY Sbjct: 871 YFILQQIDTLWREHLQAMEALRESVGLRGYGQKDPLLEYKSEGYELFLEMMTAIRRNVIY 930 Query: 235 SVYQFQP 215 S++ F P Sbjct: 931 SMFMFDP 937
>SECA_GUITH (O78441) Preprotein translocase secA subunit| Length = 877 Score = 85.1 bits (209), Expect = 6e-17 Identities = 34/68 (50%), Positives = 55/68 (80%) Frame = -2 Query: 409 ILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIYSV 230 +L ID WKEHLQ + +++++G RGY Q+DPLIEYK E +NLF++M+++IR++V+Y V Sbjct: 809 LLQKIDSSWKEHLQQITILRESIGWRGYGQKDPLIEYKNEAFNLFVNMVSKIRQSVVYLV 868 Query: 229 YQFQPVMK 206 ++ QP++K Sbjct: 869 FRSQPILK 876
>SECA_CYACA (O19911) Preprotein translocase secA subunit| Length = 895 Score = 79.0 bits (193), Expect = 4e-15 Identities = 33/68 (48%), Positives = 50/68 (73%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIYS 233 LIL ID W EH+Q + F+++ +G RGYAQ+DPLIEYK E Y LF+ M+ IR+N++Y Sbjct: 825 LILEQIDTNWSEHIQQMSFLKEFIGWRGYAQKDPLIEYKNESYILFIKMIRTIRQNILYL 884 Query: 232 VYQFQPVM 209 +++ +P + Sbjct: 885 LFRAEPTL 892
>SECA_PORPU (P51381) Preprotein translocase secA subunit| Length = 884 Score = 71.6 bits (174), Expect = 7e-13 Identities = 27/70 (38%), Positives = 49/70 (70%) Frame = -2 Query: 415 FLILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIY 236 + +L ID WK+HLQ + ++ A+G R Y Q+DPL+EYK E +NLF++M+ ++ V+Y Sbjct: 813 YYLLQQIDNAWKDHLQKMGALRDAIGWRSYGQQDPLVEYKNEAFNLFIEMITHVKHTVVY 872 Query: 235 SVYQFQPVMK 206 ++ + + ++K Sbjct: 873 AILRSRLMVK 882
>SECA_RICPR (Q9ZCX7) Preprotein translocase secA subunit| Length = 906 Score = 69.7 bits (169), Expect = 3e-12 Identities = 29/70 (41%), Positives = 48/70 (68%) Frame = -2 Query: 415 FLILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIY 236 +++L+ +D++WK+HL +L ++Q + LR YAQ+DPL EYK E +NLF M+ ++ I Sbjct: 752 YILLTTLDQVWKDHLYSLDHLRQGISLRAYAQKDPLSEYKREAFNLFEQMLNNLKELFIQ 811 Query: 235 SVYQFQPVMK 206 +VY F +K Sbjct: 812 TVYHFHIDLK 821
>SECA_ANTSP (Q06461) Preprotein translocase secA subunit| Length = 878 Score = 68.2 bits (165), Expect = 7e-12 Identities = 27/60 (45%), Positives = 43/60 (71%) Frame = -2 Query: 415 FLILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIY 236 + +L ID W+EH+ + +++++G R Y Q+DPLIEYK E +NLF++M+ IR+ VIY Sbjct: 806 YYLLQQIDYAWQEHINKISILKESIGWRSYGQQDPLIEYKNEAFNLFINMVTYIRQTVIY 865
>SECA_AQUAE (O67718) Preprotein translocase secA subunit| Length = 984 Score = 67.0 bits (162), Expect = 2e-11 Identities = 30/73 (41%), Positives = 49/73 (67%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIYS 233 ++L+ +D W+EHL L +++ + LRGYA +DPLIEYK E Y LF +MM ++ N + + Sbjct: 855 ILLNLLDNAWREHLHTLDRLREGIYLRGYAGKDPLIEYKREAYELFENMMENVKLNTLMT 914 Query: 232 VYQFQPVMKKQEE 194 ++ Q +K +EE Sbjct: 915 LFNVQ--IKSEEE 925
>SECA_RHOCA (P52966) Preprotein translocase secA subunit| Length = 904 Score = 66.2 bits (160), Expect = 3e-11 Identities = 30/71 (42%), Positives = 44/71 (61%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIYS 233 ++L ID W+EHL L+ ++ VG RGYAQRDPL EYK E + LF M+ +R V Sbjct: 760 ILLQTIDAKWREHLVTLEHLRSVVGFRGYAQRDPLSEYKTESFQLFESMLDSLRYEVTKR 819 Query: 232 VYQFQPVMKKQ 200 + Q +P+ ++ Sbjct: 820 LGQIRPMSDEE 830
>SECA_ECOLI (P10408) Preprotein translocase secA subunit| Length = 901 Score = 66.2 bits (160), Expect = 3e-11 Identities = 29/73 (39%), Positives = 49/73 (67%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIYS 233 ++L +D LWKEHL A+ +++Q + LRGYAQ+DP EYK E +++F M+ ++ VI + Sbjct: 766 VMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKDPKQEYKRESFSMFAAMLESLKYEVIST 825 Query: 232 VYQFQPVMKKQEE 194 + + Q M ++ E Sbjct: 826 LSKVQVRMPEEVE 838
>SECA_BUCAP (Q8K9U3) Preprotein translocase secA subunit| Length = 874 Score = 65.9 bits (159), Expect = 4e-11 Identities = 27/58 (46%), Positives = 42/58 (72%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVI 239 ++L +D LWKEHL A+ +++Q + LRGYAQ+DP EYK E +N+F +M+ ++ VI Sbjct: 764 IMLKTLDSLWKEHLSAMDYLRQGIHLRGYAQKDPKQEYKRESFNMFSNMLELLKYEVI 821
>SECA_STRLI (P0A4G7) Preprotein translocase secA subunit| Length = 947 Score = 65.1 bits (157), Expect = 6e-11 Identities = 27/80 (33%), Positives = 52/80 (65%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIYS 233 ++LS +D+ W+EHL + ++Q+ +GLR AQ+DPL+EY+ EG+++F MM I+ + Sbjct: 785 VVLSVLDRKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFDMFQAMMDGIKEESVGY 844 Query: 232 VYQFQPVMKKQEENSGKNDS 173 ++ + +++Q E D+ Sbjct: 845 LFNLEVQVEQQVEEVPVEDA 864
>SECA_STRCO (P0A4G6) Preprotein translocase secA subunit| Length = 947 Score = 65.1 bits (157), Expect = 6e-11 Identities = 27/80 (33%), Positives = 52/80 (65%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIYS 233 ++LS +D+ W+EHL + ++Q+ +GLR AQ+DPL+EY+ EG+++F MM I+ + Sbjct: 785 VVLSVLDRKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFDMFQAMMDGIKEESVGY 844 Query: 232 VYQFQPVMKKQEENSGKNDS 173 ++ + +++Q E D+ Sbjct: 845 LFNLEVQVEQQVEEVPVEDA 864
>SECA_HAEIN (P43803) Preprotein translocase secA subunit| Length = 901 Score = 65.1 bits (157), Expect = 6e-11 Identities = 28/73 (38%), Positives = 51/73 (69%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIYS 233 ++L +D+LWKEHL ++ +++Q + LRGYAQ+DP EYK E + +F +M+ ++ VI + Sbjct: 764 VMLQTLDELWKEHLASMDYLRQGIHLRGYAQKDPKQEYKKESFRMFTEMLDSLKHQVITA 823 Query: 232 VYQFQPVMKKQEE 194 + + + ++ QEE Sbjct: 824 LTRVR--VRTQEE 834
>SECA_STRGR (P95759) Preprotein translocase secA subunit| Length = 940 Score = 64.3 bits (155), Expect = 1e-10 Identities = 26/72 (36%), Positives = 49/72 (68%) Frame = -2 Query: 409 ILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIYSV 230 +LS +D+ W+EHL + ++Q+ +GLR AQ+DPL+EY+ EG+++F MM I+ + + Sbjct: 777 VLSVLDRKWREHLYEMDYLQEGIGLRAMAQKDPLVEYQREGFDMFNAMMEGIKEESVGYL 836 Query: 229 YQFQPVMKKQEE 194 + + +++Q E Sbjct: 837 FNLEVQVEQQVE 848
>SECA_BUCAI (P57297) Preprotein translocase secA subunit| Length = 875 Score = 63.9 bits (154), Expect = 1e-10 Identities = 26/58 (44%), Positives = 41/58 (70%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVI 239 ++L +D LWKEHL A+ +++Q + LRGYAQ+DP EYK E +N+F M+ ++ V+ Sbjct: 766 IMLQTLDSLWKEHLAAVDYLRQGIHLRGYAQKDPKQEYKRESFNMFSSMLELLKFEVV 823
>SECA_MYCSM (P71533) Preprotein translocase secA subunit| Length = 957 Score = 63.5 bits (153), Expect = 2e-10 Identities = 24/65 (36%), Positives = 46/65 (70%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIYS 233 ++L+ ID+ W+EHL + ++++ +GLR AQRDPL+EY+ EGY++F+ M+ ++ + Sbjct: 771 VLLNVIDRQWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFVGMLEALKEESVGF 830 Query: 232 VYQFQ 218 ++ Q Sbjct: 831 LFNVQ 835
>SECA_HELPJ (Q9ZL57) Preprotein translocase secA subunit| Length = 865 Score = 63.2 bits (152), Expect = 2e-10 Identities = 28/73 (38%), Positives = 46/73 (63%) Frame = -2 Query: 406 LSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIYSVY 227 L +D W+EHL + ++ + LRGY Q+DPL+EYK E YNLFL+++ I+ I ++ Sbjct: 724 LQILDNAWREHLYTMDNLKTGINLRGYNQKDPLVEYKKESYNLFLELIGDIK---IEAIQ 780 Query: 226 QFQPVMKKQEENS 188 F + + E++S Sbjct: 781 TFSKIQFENEQDS 793
>SECA_TREPA (O83394) Preprotein translocase secA subunit| Length = 916 Score = 61.6 bits (148), Expect = 7e-10 Identities = 28/66 (42%), Positives = 45/66 (68%) Frame = -2 Query: 397 IDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIYSVYQFQ 218 IDK W +HL+ L+ ++++V LR Y Q++PL EYKLEG++LF M+ IR ++ V + Sbjct: 792 IDKKWLDHLELLEILRESVYLRSYGQKNPLTEYKLEGFDLFYTMLDDIRLSIASQVVRVT 851 Query: 217 PVMKKQ 200 M++Q Sbjct: 852 VHMEEQ 857
>SECA_HELPY (O25475) Preprotein translocase secA subunit| Length = 865 Score = 61.6 bits (148), Expect = 7e-10 Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 2/65 (3%) Frame = -2 Query: 406 LSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVI--YS 233 L +D W+EHL + ++ + LRGY Q+DPL+EYK E YNLFL+ + I+ I +S Sbjct: 724 LQILDNAWREHLYTMDNLKTGINLRGYNQKDPLVEYKKESYNLFLEFIEDIKTEAIKTFS 783 Query: 232 VYQFQ 218 QF+ Sbjct: 784 KIQFE 788
>SECA1_MYCLE (P57996) Preprotein translocase secA 1 subunit| Length = 940 Score = 61.6 bits (148), Expect = 7e-10 Identities = 22/58 (37%), Positives = 43/58 (74%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVI 239 ++L+ +D+ W+EHL + ++++ +GLR AQRDPL+EY+ EGY++F+ M+ ++ + Sbjct: 770 VLLNVVDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAMLDGVKEESV 827
>SECA1_MYCTU (P0A5Y8) Preprotein translocase secA 1 subunit| Length = 949 Score = 61.2 bits (147), Expect = 9e-10 Identities = 23/50 (46%), Positives = 40/50 (80%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMM 263 ++L+ ID+ W+EHL + ++++ +GLR AQRDPL+EY+ EGY++F+ M+ Sbjct: 770 VLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAML 819
>SECA1_MYCBO (P0A5Y9) Preprotein translocase secA 1 subunit| Length = 949 Score = 61.2 bits (147), Expect = 9e-10 Identities = 23/50 (46%), Positives = 40/50 (80%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMM 263 ++L+ ID+ W+EHL + ++++ +GLR AQRDPL+EY+ EGY++F+ M+ Sbjct: 770 VLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAML 819
>SECA_CAUCR (P38380) Preprotein translocase secA subunit| Length = 923 Score = 60.1 bits (144), Expect = 2e-09 Identities = 26/55 (47%), Positives = 36/55 (65%) Frame = -2 Query: 409 ILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRN 245 +L ID W+EHL L ++ +GLRGY QRDPL EYK E ++LF ++ +R N Sbjct: 778 LLQMIDLQWREHLMHLDHLRNVIGLRGYGQRDPLNEYKTEAFSLFEKLLGDLRTN 832
>SECA_BUCBP (Q89AR1) Preprotein translocase secA subunit| Length = 850 Score = 58.5 bits (140), Expect = 6e-09 Identities = 22/58 (37%), Positives = 41/58 (70%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVI 239 +IL +D W+EHL ++++++Q + LRGY Q+DP E+K E + +FL+M++ R ++ Sbjct: 769 VILDTLDYFWREHLASMEYLRQGIHLRGYGQKDPKQEFKRESFFMFLNMLSSSRYEIV 826
>SECA_PAVLU (Q01570) Preprotein translocase secA subunit| Length = 891 Score = 56.6 bits (135), Expect = 2e-08 Identities = 22/60 (36%), Positives = 40/60 (66%) Frame = -2 Query: 409 ILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIYSV 230 +L +ID++WKE L ++ +++++G R Y QRDPL+EY+ E Y +F +IR + + + Sbjct: 825 LLQSIDQVWKEQLTRMELLKESIGWRAYGQRDPLLEYQKEAYRIFAIQTRKIRHSASHLI 884
>SECA_ODOSI (P49649) Preprotein translocase secA subunit| Length = 888 Score = 56.6 bits (135), Expect = 2e-08 Identities = 29/61 (47%), Positives = 37/61 (60%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIYS 233 LIL +D+ WKEHLQ + ++ AVG R Y QR+PL EYK + Y LF R VIY Sbjct: 822 LILIYMDREWKEHLQKMSLLRDAVGWRKYGQRNPLSEYKEDAYKLFKYRGIVTRHLVIYE 881 Query: 232 V 230 + Sbjct: 882 L 882
>SECA_BACFI (P96313) Preprotein translocase secA subunit (Fragment)| Length = 473 Score = 55.1 bits (131), Expect = 7e-08 Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 4/81 (4%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIYS 233 ++L +D+ W H+ + ++Q + LR Y Q DPL EY+ EG+ +F M+A I V S Sbjct: 350 IMLRTVDRKWMNHIDQMDQLRQGIHLRAYGQNDPLREYRFEGFEMFEAMIASIEEEV--S 407 Query: 232 VY----QFQPVMKKQEENSGK 182 +Y Q Q +++Q+ GK Sbjct: 408 MYIMKAQVQQNLERQKVAEGK 428
>SECA_STAES (Q8CPZ2) Preprotein translocase secA subunit| Length = 844 Score = 54.3 bits (129), Expect = 1e-07 Identities = 26/79 (32%), Positives = 49/79 (62%), Gaps = 4/79 (5%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRN---- 245 ++L +ID W +H+ + ++Q + LR YAQ++PL +Y+ EG+ LF MM I + Sbjct: 718 ILLRSIDTHWTDHIDTMDQLRQGIHLRSYAQQNPLRDYQNEGHELFDIMMQNIEEDTCKY 777 Query: 244 VIYSVYQFQPVMKKQEENS 188 ++ SV QF+ +++++ S Sbjct: 778 ILKSVVQFEDDVEREKSKS 796
>SECA_STAEQ (Q5HQX6) Preprotein translocase secA subunit| Length = 844 Score = 54.3 bits (129), Expect = 1e-07 Identities = 26/79 (32%), Positives = 49/79 (62%), Gaps = 4/79 (5%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRN---- 245 ++L +ID W +H+ + ++Q + LR YAQ++PL +Y+ EG+ LF MM I + Sbjct: 718 ILLRSIDTHWTDHIDTMDQLRQGIHLRSYAQQNPLRDYQNEGHELFDIMMQNIEEDTCKY 777 Query: 244 VIYSVYQFQPVMKKQEENS 188 ++ SV QF+ +++++ S Sbjct: 778 ILKSVVQFEDDVEREKSKS 796
>SECA_CHLMU (Q9PLM5) Preprotein translocase secA subunit| Length = 968 Score = 53.5 bits (127), Expect = 2e-07 Identities = 24/65 (36%), Positives = 41/65 (63%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIYS 233 +I+S+ID+ WK HL + ++ VGLR Q+DPLIE+K E + LF ++ IR ++ Sbjct: 865 VIISHIDEEWKVHLMDMDLLRSEVGLRSVGQKDPLIEFKNESFLLFEGLIRDIRIAIVKH 924 Query: 232 VYQFQ 218 ++ + Sbjct: 925 LFALE 929
>SECA_OLILU (Q32743) Preprotein translocase secA subunit| Length = 884 Score = 53.1 bits (126), Expect = 2e-07 Identities = 21/61 (34%), Positives = 43/61 (70%) Frame = -2 Query: 409 ILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIYSV 230 +L +ID W +L+ ++ +++++ R YAQ+DPL EYK EG++ F M +++R ++++V Sbjct: 817 VLESIDHGWSTNLEKMETIRESIVWRVYAQKDPLAEYKKEGFSTFRKMDEEMKRFLVFAV 876 Query: 229 Y 227 + Sbjct: 877 F 877
>SECA_CHLTR (O84707) Preprotein translocase secA subunit| Length = 969 Score = 52.8 bits (125), Expect = 3e-07 Identities = 24/65 (36%), Positives = 41/65 (63%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIYS 233 +I+S+ID+ WK HL + ++ VGLR Q+DPLIE+K E + LF ++ IR ++ Sbjct: 865 VIISHIDEEWKVHLVDMDLLRSEVGLRSVGQKDPLIEFKNESFLLFEGLIRDIRIAIVKH 924 Query: 232 VYQFQ 218 ++ + Sbjct: 925 LFALE 929
>SECA_BORBU (O07497) Preprotein translocase secA subunit| Length = 899 Score = 52.8 bits (125), Expect = 3e-07 Identities = 25/63 (39%), Positives = 42/63 (66%) Frame = -2 Query: 406 LSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIYSVY 227 L NID ++EHL L +++AV LR YA ++P+ EYK EG+++F +++ I+ + I V Sbjct: 769 LKNIDFKFQEHLANLDSLREAVYLRSYANKNPITEYKEEGFSIFSELIKDIKVSTIRRVL 828 Query: 226 QFQ 218 Q + Sbjct: 829 QLK 831
>SECA_BACSU (P28366) Preprotein translocase secA subunit| Length = 841 Score = 52.0 bits (123), Expect = 6e-07 Identities = 26/75 (34%), Positives = 44/75 (58%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIYS 233 ++L +D W +H+ A+ ++Q + LR YAQ +PL EY++EG+ +F M+ I V Sbjct: 715 IVLRAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFAMFEHMIESIEDEVA-- 772 Query: 232 VYQFQPVMKKQEENS 188 + VMK + EN+ Sbjct: 773 ----KFVMKAEIENN 783
>SECA_STAAW (Q7A1G4) Preprotein translocase secA subunit| Length = 843 Score = 50.4 bits (119), Expect = 2e-06 Identities = 24/76 (31%), Positives = 47/76 (61%), Gaps = 4/76 (5%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRN---- 245 ++L +ID W +H+ + ++Q + LR YAQ++PL +Y+ EG+ LF MM I + Sbjct: 718 ILLRSIDSHWTDHIDTMDQLRQGIHLRSYAQQNPLRDYQNEGHELFDIMMQNIEEDTCKF 777 Query: 244 VIYSVYQFQPVMKKQE 197 ++ SV Q + +++++ Sbjct: 778 ILKSVVQVEDNIEREK 793
>SECA_STAAU (O06446) Preprotein translocase secA subunit| Length = 843 Score = 50.4 bits (119), Expect = 2e-06 Identities = 24/76 (31%), Positives = 47/76 (61%), Gaps = 4/76 (5%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRN---- 245 ++L +ID W +H+ + ++Q + LR YAQ++PL +Y+ EG+ LF MM I + Sbjct: 718 ILLRSIDSHWTDHIDTMDQLRQGIHLRSYAQQNPLRDYQNEGHELFDIMMQNIEEDTCKF 777 Query: 244 VIYSVYQFQPVMKKQE 197 ++ SV Q + +++++ Sbjct: 778 ILKSVVQVEDNIEREK 793
>SECA_STAAS (Q6GB77) Preprotein translocase secA subunit| Length = 843 Score = 50.4 bits (119), Expect = 2e-06 Identities = 24/76 (31%), Positives = 47/76 (61%), Gaps = 4/76 (5%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRN---- 245 ++L +ID W +H+ + ++Q + LR YAQ++PL +Y+ EG+ LF MM I + Sbjct: 718 ILLRSIDSHWTDHIDTMDQLRQGIHLRSYAQQNPLRDYQNEGHELFDIMMQNIEEDTCKF 777 Query: 244 VIYSVYQFQPVMKKQE 197 ++ SV Q + +++++ Sbjct: 778 ILKSVVQVEDNIEREK 793
>SECA_STAAR (Q6GIN8) Preprotein translocase secA subunit| Length = 843 Score = 50.4 bits (119), Expect = 2e-06 Identities = 24/76 (31%), Positives = 47/76 (61%), Gaps = 4/76 (5%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRN---- 245 ++L +ID W +H+ + ++Q + LR YAQ++PL +Y+ EG+ LF MM I + Sbjct: 718 ILLRSIDSHWTDHIDTMDQLRQGIHLRSYAQQNPLRDYQNEGHELFDIMMQNIEEDTCKF 777 Query: 244 VIYSVYQFQPVMKKQE 197 ++ SV Q + +++++ Sbjct: 778 ILKSVVQVEDNIEREK 793
>SECA_STAAN (Q7A6R5) Preprotein translocase secA subunit| Length = 843 Score = 50.4 bits (119), Expect = 2e-06 Identities = 24/76 (31%), Positives = 47/76 (61%), Gaps = 4/76 (5%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRN---- 245 ++L +ID W +H+ + ++Q + LR YAQ++PL +Y+ EG+ LF MM I + Sbjct: 718 ILLRSIDSHWTDHIDTMDQLRQGIHLRSYAQQNPLRDYQNEGHELFDIMMQNIEEDTCKF 777 Query: 244 VIYSVYQFQPVMKKQE 197 ++ SV Q + +++++ Sbjct: 778 ILKSVVQVEDNIEREK 793
>SECA_STAAM (Q99VM2) Preprotein translocase secA subunit| Length = 843 Score = 50.4 bits (119), Expect = 2e-06 Identities = 24/76 (31%), Positives = 47/76 (61%), Gaps = 4/76 (5%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRN---- 245 ++L +ID W +H+ + ++Q + LR YAQ++PL +Y+ EG+ LF MM I + Sbjct: 718 ILLRSIDSHWTDHIDTMDQLRQGIHLRSYAQQNPLRDYQNEGHELFDIMMQNIEEDTCKF 777 Query: 244 VIYSVYQFQPVMKKQE 197 ++ SV Q + +++++ Sbjct: 778 ILKSVVQVEDNIEREK 793
>SECA_STAAC (Q5HHR7) Preprotein translocase secA subunit| Length = 843 Score = 50.4 bits (119), Expect = 2e-06 Identities = 24/76 (31%), Positives = 47/76 (61%), Gaps = 4/76 (5%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRN---- 245 ++L +ID W +H+ + ++Q + LR YAQ++PL +Y+ EG+ LF MM I + Sbjct: 718 ILLRSIDSHWTDHIDTMDQLRQGIHLRSYAQQNPLRDYQNEGHELFDIMMQNIEEDTCKF 777 Query: 244 VIYSVYQFQPVMKKQE 197 ++ SV Q + +++++ Sbjct: 778 ILKSVVQVEDNIEREK 793
>SECA_STAS1 (Q49VV2) Preprotein translocase secA subunit| Length = 843 Score = 50.1 bits (118), Expect = 2e-06 Identities = 24/73 (32%), Positives = 44/73 (60%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIYS 233 ++L +ID W +H+ + ++Q + LR Y Q++PL +Y+ EG+ LF MM I +V S Sbjct: 718 ILLRSIDTHWTDHIDTMDQLRQGIHLRSYGQQNPLRDYQNEGHQLFDTMMQNIEEDV--S 775 Query: 232 VYQFQPVMKKQEE 194 Y + V+ +++ Sbjct: 776 KYILKSVVSVEDD 788
>SECA_STACA (P47994) Preprotein translocase secA subunit| Length = 844 Score = 49.7 bits (117), Expect = 3e-06 Identities = 21/57 (36%), Positives = 36/57 (63%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNV 242 ++L +ID W +H+ + ++Q + LR Y Q++PL +Y+ EG+ LF MM I +V Sbjct: 720 ILLRSIDGRWTDHIDTMDQLRQGIHLRSYGQQNPLRDYQNEGHQLFDTMMVNIEEDV 776
>SECA_STAHJ (Q4L4H8) Preprotein translocase secA subunit| Length = 845 Score = 49.3 bits (116), Expect = 4e-06 Identities = 24/76 (31%), Positives = 46/76 (60%), Gaps = 4/76 (5%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRN---- 245 ++L +ID W +H+ + ++Q + LR YAQ++PL +Y+ EG+ LF MM I + Sbjct: 718 ILLRSIDTHWTDHIDTMDQLRQGIHLRSYAQQNPLRDYQNEGHELFDMMMQNIEEDTSKF 777 Query: 244 VIYSVYQFQPVMKKQE 197 ++ SV Q +++++ Sbjct: 778 ILKSVIQVDENIEREK 793
>SECA_LISMO (P47847) Preprotein translocase secA subunit| Length = 837 Score = 48.5 bits (114), Expect = 6e-06 Identities = 22/80 (27%), Positives = 43/80 (53%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIYS 233 ++L +D W +H+ A+ ++ + LR Y Q DPL EY+ EG+ +F M++ I +V Sbjct: 715 VLLRVVDTKWVDHIDAMDHLRDGIHLRAYGQIDPLREYQSEGFEMFEAMVSSIDEDVARY 774 Query: 232 VYQFQPVMKKQEENSGKNDS 173 + + + + E K ++ Sbjct: 775 IMKAEIRQNLEREQVAKGEA 794
>SECA_LISIN (Q927Y3) Preprotein translocase secA subunit| Length = 837 Score = 48.5 bits (114), Expect = 6e-06 Identities = 22/80 (27%), Positives = 43/80 (53%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIYS 233 ++L +D W +H+ A+ ++ + LR Y Q DPL EY+ EG+ +F M++ I +V Sbjct: 715 VLLRVVDTKWVDHIDAMDHLRDGIHLRAYGQIDPLREYQSEGFEMFEAMVSSIDEDVARY 774 Query: 232 VYQFQPVMKKQEENSGKNDS 173 + + + + E K ++ Sbjct: 775 IMKAEIRQNLEREQVAKGEA 794
>SECA_CHLPN (Q9Z765) Preprotein translocase secA subunit| Length = 970 Score = 47.0 bits (110), Expect = 2e-05 Identities = 20/65 (30%), Positives = 40/65 (61%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIYS 233 +++ +ID+ W+ HL + ++ VGLR Q+DPL+E+K E + LF ++ IR + Sbjct: 865 VMVMHIDEQWRIHLVDMDLLRSEVGLRTVGQKDPLLEFKHESFLLFESLIRDIRITIARH 924 Query: 232 VYQFQ 218 +++ + Sbjct: 925 LFRLE 929
>SECA_MYCGE (P47318) Preprotein translocase secA subunit| Length = 806 Score = 38.1 bits (87), Expect = 0.008 Identities = 20/61 (32%), Positives = 35/61 (57%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIYS 233 +I++++DK W EHL ++ +++ V LR PL Y E LF M+ +I ++VI Sbjct: 712 IIITSMDKHWTEHLDSVFKLREGVVLRSMEHTSPLNVYIKETDILFKTMLQKIAQDVIVQ 771 Query: 232 V 230 + Sbjct: 772 I 772
>SECA_MYCPN (P75559) Preprotein translocase secA subunit| Length = 808 Score = 37.7 bits (86), Expect = 0.011 Identities = 21/61 (34%), Positives = 34/61 (55%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIYS 233 ++++ +DK W EHL + +++ V LR Q PL Y E LF M+ +I R+VI Sbjct: 712 IMITAMDKHWIEHLDNVFKLREGVTLRSMEQTSPLNVYIRETDILFQTMLQKIARDVIIQ 771 Query: 232 V 230 + Sbjct: 772 I 772
>SECA2_MYCTU (P66785) Preprotein translocase secA 2 subunit| Length = 808 Score = 32.7 bits (73), Expect = 0.35 Identities = 15/63 (23%), Positives = 36/63 (57%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIYS 233 ++L ++D+ W +HL L +++++ LR +++PL E+ + + +D A + + I + Sbjct: 700 IMLYHLDRGWADHLAYLADIRESIHLRALGRQNPLDEF----HRMAVDAFASLAADAIEA 755 Query: 232 VYQ 224 Q Sbjct: 756 AQQ 758
>SECA2_MYCBO (P66786) Preprotein translocase secA 2 subunit| Length = 808 Score = 32.7 bits (73), Expect = 0.35 Identities = 15/63 (23%), Positives = 36/63 (57%) Frame = -2 Query: 412 LILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEYKLEGYNLFLDMMAQIRRNVIYS 233 ++L ++D+ W +HL L +++++ LR +++PL E+ + + +D A + + I + Sbjct: 700 IMLYHLDRGWADHLAYLADIRESIHLRALGRQNPLDEF----HRMAVDAFASLAADAIEA 755 Query: 232 VYQ 224 Q Sbjct: 756 AQQ 758
>PYRF_FUSNN (Q8RG83) Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP| decarboxylase) (OMPDCase) (OMPdecase) Length = 237 Score = 29.6 bits (65), Expect = 2.9 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Frame = -2 Query: 406 LSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLI--EYKLEGYNLFLDMMAQIRRNVIYS 233 L +DK +E L FV+ VG+ Y Q P++ E K G+ +FLD+ N +YS Sbjct: 18 LEFLDKFKEEKL----FVK--VGMELYLQNGPIVIDEIKKRGHKIFLDLKLHDIPNTVYS 71
>NUC2_SCHPO (P10505) Nuclear scaffold-like protein p76 (Nuclear alteration| protein 2) Length = 665 Score = 28.9 bits (63), Expect = 5.0 Identities = 16/37 (43%), Positives = 21/37 (56%) Frame = -2 Query: 409 ILSNIDKLWKEHLQALKFVQQAVGLRGYAQRDPLIEY 299 IL+N L +EH QALK + +A+ Q DP EY Sbjct: 436 ILANCFSLQREHSQALKCINRAI------QLDPTFEY 466
>BGLA_BACSU (P42973) 6-phospho-beta-glucosidase (EC 3.2.1.86)| Length = 479 Score = 28.5 bits (62), Expect = 6.6 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Frame = -2 Query: 343 VGLRGYAQRDPLIEYKLEGYNL-FLDMMAQIRRNVIYSVYQFQPVMKKQEENSGKNDS 173 V +RGY L E++ EGYN+ F D +I RN F M ++ KND+ Sbjct: 269 VQVRGYYPSYALKEFEREGYNITFEDGDDEILRNGTVDYLGFSYYMSTTVKSDVKNDN 326 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,781,888 Number of Sequences: 219361 Number of extensions: 1053622 Number of successful extensions: 2631 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 2536 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2631 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2228238148 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
