ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl41h10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_183779.1| Oryza sativa (japonica cultivar-group), predic... 216 4e-53
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 176 4e-41
3dbj|AP002953.2| Oryza sativa (japonica cultivar-group) genomic D... 176 4e-41
4gb|AC144728.11| Medicago truncatula clone mth2-6g7, complete seq... 111 2e-21
5emb|X82404.1|PSSECA P.sativum mRNA for SecA protein 103 4e-19
6ref|NM_116410.1| Arabidopsis thaliana ATP binding AT4G01800 mRNA... 90 7e-15
7dbj|AP003414.3| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
8gb|AC007138.1| Arabidopsis thaliana BAC T7B11 from chromosome IV... 84 4e-13
9emb|AL161493.2|ATCHRIV5 Arabidopsis thaliana DNA chromosome 4, c... 84 4e-13
10emb|AL161492.2|ATCHRIV4 Arabidopsis thaliana DNA chromosome 4, c... 84 4e-13
11gb|AF104919.1|T15B16 Arabidopsis thaliana BAC T15B16 84 4e-13
12emb|Z49124.1|SOSECA S.oleracea chloroplast secA mRNA 58 2e-05
13ref|NM_183772.1| Oryza sativa (japonica cultivar-group), predic... 50 0.006
14gb|AC004690.2| Homo sapiens PAC clone RP4-630C24 from 7, complet... 50 0.006
15emb|BX827284.1|CNS0A3N9 Arabidopsis thaliana Full-length cDNA Co... 50 0.006
16gb|AC160339.2| Mus musculus BAC clone RP23-410O11 from chromosom... 48 0.023
17gb|AC157598.4| Mus musculus BAC clone RP23-193D3 from chromosome... 44 0.36
18gb|AY508970.1| Pisum sativum cultivar Torsdag cryptochrome 1 apo... 42 1.4
19gb|AC110816.7| Mus musculus BAC clone RP23-20P15 from chromosome... 42 1.4
20gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 42 1.4
21gb|AC124492.4| Mus musculus BAC clone RP23-454I23 from chromosom... 42 1.4
22emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4,... 42 1.4
23dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
24dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
25gb|AC153657.4| Mus musculus BAC clone RP23-324B3 from chromosome... 42 1.4
26dbj|AP005110.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
27dbj|AP001329.3| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 1.4
28gb|AC167537.7| Mus musculus chromosome 8, clone RP23-99B10, comp... 40 5.6
29ref|XM_509658.1| PREDICTED: Pan troglodytes similar to ribosome ... 40 5.6
30gb|AC124228.16| Mus musculus chromosome 5, clone RP23-345O14, co... 40 5.6
31gb|AC087546.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
32gb|AC134443.3| Mus musculus BAC clone RP24-107B13 from chromosom... 40 5.6
33gb|AC146259.4| Pan troglodytes BAC clone RP43-28H17 from 7, comp... 40 5.6
34gb|AC161216.4| Mus musculus chromosome 7, clone RP23-8K23, compl... 40 5.6
35gb|AC124662.10| Mus musculus chromosome 9, clone RP24-409K22, co... 40 5.6
36gb|AC091324.10| Mus musculus chromosome 7, clone RP23-7G1, compl... 40 5.6
37gb|AC004888.1| Homo sapiens PAC clone RP4-797C5 from 7, complete... 40 5.6
38gb|AC117245.3| Mus musculus BAC clone RP24-233B16 from 9, comple... 40 5.6
39gb|AC113309.7| Mus musculus chromosome 6, clone RP23-440D19, com... 40 5.6
40gb|AC102077.7| Mus musculus chromosome 7, clone RP23-423B21, com... 40 5.6
41ref|XM_792126.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 5.6
42emb|AL138960.16| Human DNA sequence from clone RP11-269C23 on ch... 40 5.6
43emb|AL035423.4|HS20I3 Human DNA sequence from clone RP1-20I3 on ... 40 5.6
44gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome 40 5.6
45emb|CR859807.1| Pongo pygmaeus mRNA; cDNA DKFZp469F1626 (from cl... 40 5.6
46gb|AC090592.5| Homo sapiens chromosome 11, clone RP11-405K6, com... 40 5.6
47dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
48dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
49dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
50dbj|AP005169.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
51dbj|BS000216.1| Pan troglodytes chromosome 22 clone:RP43-057N15,... 40 5.6
52gb|AC131315.16| Mus musculus chromosome 7, clone RP24-535I10, co... 40 5.6
53dbj|AK069124.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
54gb|AC007103.4|AC007103 Homo sapiens chromosome 4 clone C0190D22 ... 40 5.6
55dbj|AP001699.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 5.6
56gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
57gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
58emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.6
59gb|AC168046.7| Mus musculus chromosome 8, clone RP24-335A7, comp... 40 5.6
60dbj|AP001604.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 5.6 
>ref|NM_183779.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3048

 Score =  216 bits (109), Expect = 4e-53
 Identities = 255/303 (84%), Gaps = 3/303 (0%)
 Strand = Plus / Minus

                                                                        
Query: 116  tcaagatgcagcttgggctgcaccaagtttcttggcacccttgtgcagattcttttttga 175
            |||||||||||||||||| ||||||||||| || ||||||||||  |  ||||| |||| 
Sbjct: 3048 tcaagatgcagcttgggcagcaccaagtttgttagcacccttgtcgactttcttctttgt 2989

                                                                        
Query: 176  atcgttctttccagaattttcctctt---gcttcttcatcacaggttggaactgatatac 232
              | |||||| |||| || |||||||   | ||||||||||| || | ||||||||| ||
Sbjct: 2988 ccccttcttttcagatttctcctcttcttggttcttcatcactggcttgaactgataaac 2929

                                                                        
Query: 233  cgaataaataacatttctccggatttgagccatcatatccaagaaaagattatatccctc 292
             || ||||| ||||| |  || ||||||||||||||||||||||||||||||||||||||
Sbjct: 2928 agagtaaattacattccgtcgaatttgagccatcatatccaagaaaagattatatccctc 2869

                                                                        
Query: 293  aagtttatattcgataagggggtctcgttgagcatagccccttaacccaacagcttgttg 352
             ||||||||||| ||||| || |||||||| || || ||||| || |||||||| |||||
Sbjct: 2868 cagtttatattcaataagaggatctcgttgggcgtaacccctcaaaccaacagcctgttg 2809

                                                                        
Query: 353  cacaaactttaaagcttgcaagtgttctttccagagcttatcaatattgcttaggattag 412
            ||||||||| || || ||||||||||| ||||||||| ||||||| |||||||| || ||
Sbjct: 2808 cacaaacttcaatgcctgcaagtgttccttccagagcctatcaatgttgcttagaataag 2749

               
Query: 413  gaa 415
            |||
Sbjct: 2748 gaa 2746
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  176 bits (89), Expect = 4e-41
 Identities = 143/161 (88%)
 Strand = Plus / Plus

                                                                            
Query: 255      atttgagccatcatatccaagaaaagattatatccctcaagtttatattcgataaggggg 314
                |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || 
Sbjct: 12219059 atttgagccatcatatccaagaaaagattatatccctccagtttatattcaataagagga 12219118

                                                                            
Query: 315      tctcgttgagcatagccccttaacccaacagcttgttgcacaaactttaaagcttgcaag 374
                |||||||| || || ||||| || |||||||| |||||||||||||| || || ||||||
Sbjct: 12219119 tctcgttgggcgtaacccctcaaaccaacagcctgttgcacaaacttcaatgcctgcaag 12219178

                                                         
Query: 375      tgttctttccagagcttatcaatattgcttaggattaggaa 415
                ||||| ||||||||| ||||||| |||||||| || |||||
Sbjct: 12219179 tgttccttccagagcctatcaatgttgcttagaataaggaa 12219219



 Score =  101 bits (51), Expect = 2e-18
 Identities = 118/139 (84%), Gaps = 1/139 (0%)
 Strand = Plus / Plus

                                                                            
Query: 224      ctgatataccgaataaataacatttctccggatttgagccatcatatccaagaaaagatt 283
                |||||| || |||||||| ||||| | | | ||||||| |||| ||||||||||||||||
Sbjct: 12208604 ctgataaacagaataaattacattccactgaatttgagacatcgtatccaagaaaagatt 12208663

                                                                            
Query: 284      atatccctcaagtttatattcgataagggggtctcgttgagcatagccccttaacccaac 343
                ||||||||| ||||||||||| ||||| || |||||||| |  || ||||| || |||||
Sbjct: 12208664 atatccctccagtttatattcaataagaggatctcgttgggtgtaacccctcaaaccaac 12208723

                                   
Query: 344      agc-ttgttgcacaaactt 361
                ||| |||||||| ||||||
Sbjct: 12208724 agctttgttgcataaactt 12208742



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 108/128 (84%), Gaps = 1/128 (0%)
 Strand = Plus / Minus

                                                                            
Query: 235      aataaataacatttctccggatttgagccatcatatccaagaaaagattatatccctcaa 294
                ||||||| ||||| | ||| | ||||| |||||||||||||||||||||||||||||| |
Sbjct: 12175892 aataaattacattccaccgaacttgagacatcatatccaagaaaagattatatccctcca 12175833

                                                                            
Query: 295      gtttatattcgataagggggtctcgttgagcatagccccttaacccaacagctt-gttgc 353
                 ||||||||| ||||| || |||||||| |  || || || || | |||||||| |||||
Sbjct: 12175832 atttatattcaataagaggatctcgttgggtgtaacctctcaaactaacagctttgttgc 12175773

                        
Query: 354      acaaactt 361
                ||||||||
Sbjct: 12175772 acaaactt 12175765



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                              
Query: 114      actcaagatgcagcttgggctgcaccaagtttcttggcacccttgt 159
                |||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 12218499 actcaagatgcagcttgggcagcaccaagtttgttagcacccttgt 12218544



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                             
Query: 115      ctcaagatgcagcttgggctgcaccaagtttcttggcacccttgt 159
                |||||||||||||||| || ||||||||||| || ||||||||||
Sbjct: 12208001 ctcaagatgcagcttgagcagcaccaagtttgttagcacccttgt 12208045



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                      
Query: 369      tgcaagtgttctttccagagcttatcaatattgcttag 406
                ||||||||||| ||||||||| ||||||| ||||||||
Sbjct: 12208758 tgcaagtgttccttccagagcctatcaatgttgcttag 12208795



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                      
Query: 369      tgcaagtgttctttccagagcttatcaatattgcttag 406
                ||||||||||| ||||||||| ||||||| ||||||||
Sbjct: 12175749 tgcaagtgttccttccagagcctatcaatgttgcttag 12175712



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                         
Query: 119      agatgcagcttgggctgcaccaagtttcttggcacccttgt 159
                |||||||||||| || ||||||||||| || ||||||||||
Sbjct: 12176465 agatgcagcttgagcagcaccaagtttgttagcacccttgt 12176425
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>dbj|AP002953.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0426D06
          Length = 162173

 Score =  176 bits (89), Expect = 4e-41
 Identities = 143/161 (88%)
 Strand = Plus / Plus

                                                                         
Query: 255   atttgagccatcatatccaagaaaagattatatccctcaagtttatattcgataaggggg 314
             |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || 
Sbjct: 43685 atttgagccatcatatccaagaaaagattatatccctccagtttatattcaataagagga 43744

                                                                         
Query: 315   tctcgttgagcatagccccttaacccaacagcttgttgcacaaactttaaagcttgcaag 374
             |||||||| || || ||||| || |||||||| |||||||||||||| || || ||||||
Sbjct: 43745 tctcgttgggcgtaacccctcaaaccaacagcctgttgcacaaacttcaatgcctgcaag 43804

                                                      
Query: 375   tgttctttccagagcttatcaatattgcttaggattaggaa 415
             ||||| ||||||||| ||||||| |||||||| || |||||
Sbjct: 43805 tgttccttccagagcctatcaatgttgcttagaataaggaa 43845



 Score =  101 bits (51), Expect = 2e-18
 Identities = 118/139 (84%), Gaps = 1/139 (0%)
 Strand = Plus / Plus

                                                                         
Query: 224   ctgatataccgaataaataacatttctccggatttgagccatcatatccaagaaaagatt 283
             |||||| || |||||||| ||||| | | | ||||||| |||| ||||||||||||||||
Sbjct: 33230 ctgataaacagaataaattacattccactgaatttgagacatcgtatccaagaaaagatt 33289

                                                                         
Query: 284   atatccctcaagtttatattcgataagggggtctcgttgagcatagccccttaacccaac 343
             ||||||||| ||||||||||| ||||| || |||||||| |  || ||||| || |||||
Sbjct: 33290 atatccctccagtttatattcaataagaggatctcgttgggtgtaacccctcaaaccaac 33349

                                
Query: 344   agc-ttgttgcacaaactt 361
             ||| |||||||| ||||||
Sbjct: 33350 agctttgttgcataaactt 33368



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 108/128 (84%), Gaps = 1/128 (0%)
 Strand = Plus / Minus

                                                                       
Query: 235 aataaataacatttctccggatttgagccatcatatccaagaaaagattatatccctcaa 294
           ||||||| ||||| | ||| | ||||| |||||||||||||||||||||||||||||| |
Sbjct: 518 aataaattacattccaccgaacttgagacatcatatccaagaaaagattatatccctcca 459

                                                                       
Query: 295 gtttatattcgataagggggtctcgttgagcatagccccttaacccaacagctt-gttgc 353
            ||||||||| ||||| || |||||||| |  || || || || | |||||||| |||||
Sbjct: 458 atttatattcaataagaggatctcgttgggtgtaacctctcaaactaacagctttgttgc 399

                   
Query: 354 acaaactt 361
           ||||||||
Sbjct: 398 acaaactt 391



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                           
Query: 114   actcaagatgcagcttgggctgcaccaagtttcttggcacccttgt 159
             |||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct: 43125 actcaagatgcagcttgggcagcaccaagtttgttagcacccttgt 43170



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                          
Query: 115   ctcaagatgcagcttgggctgcaccaagtttcttggcacccttgt 159
             |||||||||||||||| || ||||||||||| || ||||||||||
Sbjct: 32627 ctcaagatgcagcttgagcagcaccaagtttgttagcacccttgt 32671



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 369   tgcaagtgttctttccagagcttatcaatattgcttag 406
             ||||||||||| ||||||||| ||||||| ||||||||
Sbjct: 33384 tgcaagtgttccttccagagcctatcaatgttgcttag 33421



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 369 tgcaagtgttctttccagagcttatcaatattgcttag 406
           ||||||||||| ||||||||| ||||||| ||||||||
Sbjct: 375 tgcaagtgttccttccagagcctatcaatgttgcttag 338



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 119  agatgcagcttgggctgcaccaagtttcttggcacccttgt 159
            |||||||||||| || ||||||||||| || ||||||||||
Sbjct: 1091 agatgcagcttgagcagcaccaagtttgttagcacccttgt 1051
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>gb|AC144728.11| Medicago truncatula clone mth2-6g7, complete sequence
          Length = 105161

 Score =  111 bits (56), Expect = 2e-21
 Identities = 149/180 (82%)
 Strand = Plus / Minus

                                                                          
Query: 224    ctgatataccgaataaataacatttctccggatttgagccatcatatccaagaaaagatt 283
              ||||||||  ||||| ||||||||||| |  ||||| |||||||| ||||||||||| ||
Sbjct: 100245 ctgatatatagaatatataacatttcttcttatttgtgccatcatctccaagaaaaggtt 100186

                                                                          
Query: 284    atatccctcaagtttatattcgataagggggtctcgttgagcatagccccttaacccaac 343
               || ||||||||||||||||| ||||| || || ||||| ||||| || | ||| || ||
Sbjct: 100185 gtaaccctcaagtttatattcaataagtggatcccgttgcgcataccctcgtaaacccac 100126

                                                                          
Query: 344    agcttgttgcacaaactttaaagcttgcaagtgttctttccagagcttatcaatattgct 403
              |||||| || ||||| ||||  |||||||| ||||||||||| |||  ||| ||||||||
Sbjct: 100125 agcttgctgaacaaattttagtgcttgcaaatgttctttccacagccgatcgatattgct 100066
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>emb|X82404.1|PSSECA P.sativum mRNA for SecA protein
          Length = 3608

 Score =  103 bits (52), Expect = 4e-19
 Identities = 166/204 (81%)
 Strand = Plus / Minus

                                                                        
Query: 212  cacaggttggaactgatataccgaataaataacatttctccggatttgagccatcatatc 271
            ||||||||  ||||||||||  ||||| ||||||||||| |  ||||| |||||||| ||
Sbjct: 3116 cacaggtttaaactgatatatggaatatataacatttcttcttatttgtgccatcatctc 3057

                                                                        
Query: 272  caagaaaagattatatccctcaagtttatattcgataagggggtctcgttgagcatagcc 331
            ||||||||| || || ||||| || |||||||| ||||| || || ||||| ||||| ||
Sbjct: 3056 caagaaaaggttgtaaccctcgagcttatattcaataagtggatcccgttgtgcataccc 2997

                                                                        
Query: 332  ccttaacccaacagcttgttgcacaaactttaaagcttgcaagtgttctttccagagctt 391
             | ||| || |||||||| || ||||| ||||  ||||| |  ||||||||||| |||  
Sbjct: 2996 tcgtaaacccacagcttgctgaacaaattttagtgcttgtagatgttctttccaaagccg 2937

                                    
Query: 392  atcaatattgcttaggattaggaa 415
            |||||||||||| | |||||||||
Sbjct: 2936 atcaatattgctcaagattaggaa 2913
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>ref|NM_116410.1| Arabidopsis thaliana ATP binding AT4G01800 mRNA, complete cds
          Length = 3069

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 162/201 (80%)
 Strand = Plus / Minus

                                                                        
Query: 216  ggttggaactgatataccgaataaataacatttctccggatttgagccatcatatccaag 275
            ||||| ||||||||||  || || || |||||||| || |||||||||||||| ||||  
Sbjct: 2939 ggttgaaactgatatatggagtatatcacatttcttcgtatttgagccatcatttccaga 2880

                                                                        
Query: 276  aaaagattatatccctcaagtttatattcgataagggggtctcgttgagcatagcccctt 335
            || ||||| ||||| || || ||||| ||||| || || || ||||| ||||| || || 
Sbjct: 2879 aatagattgtatccttcgagcttatactcgatgagtggatcgcgttgcgcatatcctctg 2820

                                                                        
Query: 336  aacccaacagcttgttgcacaaactttaaagcttgcaagtgttctttccagagcttatca 395
            | ||| |||||||||||||| ||||| |  ||||| | |||||||||||| | | |||||
Sbjct: 2819 agccccacagcttgttgcacgaacttgagtgcttgaaggtgttctttccataacctatca 2760

                                 
Query: 396  atattgcttaggattaggaat 416
            |||||||| | ||||| ||||
Sbjct: 2759 atattgctcaagattaagaat 2739
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>dbj|AP003414.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1153F04
          Length = 158174

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 108/128 (84%), Gaps = 1/128 (0%)
 Strand = Plus / Minus

                                                                          
Query: 235    aataaataacatttctccggatttgagccatcatatccaagaaaagattatatccctcaa 294
              ||||||| ||||| | ||| | ||||| |||||||||||||||||||||||||||||| |
Sbjct: 142832 aataaattacattccaccgaacttgagacatcatatccaagaaaagattatatccctcca 142773

                                                                          
Query: 295    gtttatattcgataagggggtctcgttgagcatagccccttaacccaacagctt-gttgc 353
               ||||||||| ||||| || |||||||| |  || || || || | |||||||| |||||
Sbjct: 142772 atttatattcaataagaggatctcgttgggtgtaacctctcaaactaacagctttgttgc 142713

                      
Query: 354    acaaactt 361
              ||||||||
Sbjct: 142712 acaaactt 142705



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                    
Query: 369    tgcaagtgttctttccagagcttatcaatattgcttag 406
              ||||||||||| ||||||||| ||||||| ||||||||
Sbjct: 142689 tgcaagtgttccttccagagcctatcaatgttgcttag 142652



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                       
Query: 119    agatgcagcttgggctgcaccaagtttcttggcacccttgt 159
              |||||||||||| || ||||||||||| || ||||||||||
Sbjct: 143405 agatgcagcttgagcagcaccaagtttgttagcacccttgt 143365
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>gb|AC007138.1| Arabidopsis thaliana BAC T7B11 from chromosome IV near 10 cM, complete
             sequence
          Length = 120185

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 141/174 (81%)
 Strand = Plus / Plus

                                                                         
Query: 243   acatttctccggatttgagccatcatatccaagaaaagattatatccctcaagtttatat 302
             |||||||| || |||||||||||||| ||||  || ||||| ||||| || || ||||| 
Sbjct: 14682 acatttcttcgtatttgagccatcatttccagaaatagattgtatccttcgagcttatac 14741

                                                                         
Query: 303   tcgataagggggtctcgttgagcatagccccttaacccaacagcttgttgcacaaacttt 362
             ||||| || || || ||||| ||||| || || | ||| |||||||||||||| ||||| 
Sbjct: 14742 tcgatgagtggatcgcgttgcgcatatcctctgagccccacagcttgttgcacgaacttg 14801

                                                                   
Query: 363   aaagcttgcaagtgttctttccagagcttatcaatattgcttaggattaggaat 416
             |  ||||| | |||||||||||| | | ||||||||||||| | ||||| ||||
Sbjct: 14802 agtgcttgaaggtgttctttccataacctatcaatattgctcaagattaagaat 14855
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>emb|AL161493.2|ATCHRIV5 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 5
          Length = 198220

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 141/174 (81%)
 Strand = Plus / Plus

                                                                       
Query: 243 acatttctccggatttgagccatcatatccaagaaaagattatatccctcaagtttatat 302
           |||||||| || |||||||||||||| ||||  || ||||| ||||| || || ||||| 
Sbjct: 35  acatttcttcgtatttgagccatcatttccagaaatagattgtatccttcgagcttatac 94

                                                                       
Query: 303 tcgataagggggtctcgttgagcatagccccttaacccaacagcttgttgcacaaacttt 362
           ||||| || || || ||||| ||||| || || | ||| |||||||||||||| ||||| 
Sbjct: 95  tcgatgagtggatcgcgttgcgcatatcctctgagccccacagcttgttgcacgaacttg 154

                                                                 
Query: 363 aaagcttgcaagtgttctttccagagcttatcaatattgcttaggattaggaat 416
           |  ||||| | |||||||||||| | | ||||||||||||| | ||||| ||||
Sbjct: 155 agtgcttgaaggtgttctttccataacctatcaatattgctcaagattaagaat 208
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>emb|AL161492.2|ATCHRIV4 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 4
          Length = 198697

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 141/174 (81%)
 Strand = Plus / Plus

                                                                          
Query: 243    acatttctccggatttgagccatcatatccaagaaaagattatatccctcaagtttatat 302
              |||||||| || |||||||||||||| ||||  || ||||| ||||| || || ||||| 
Sbjct: 193732 acatttcttcgtatttgagccatcatttccagaaatagattgtatccttcgagcttatac 193791

                                                                          
Query: 303    tcgataagggggtctcgttgagcatagccccttaacccaacagcttgttgcacaaacttt 362
              ||||| || || || ||||| ||||| || || | ||| |||||||||||||| ||||| 
Sbjct: 193792 tcgatgagtggatcgcgttgcgcatatcctctgagccccacagcttgttgcacgaacttg 193851

                                                                    
Query: 363    aaagcttgcaagtgttctttccagagcttatcaatattgcttaggattaggaat 416
              |  ||||| | |||||||||||| | | ||||||||||||| | ||||| ||||
Sbjct: 193852 agtgcttgaaggtgttctttccataacctatcaatattgctcaagattaagaat 193905
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>gb|AF104919.1|T15B16 Arabidopsis thaliana BAC T15B16
          Length = 90596

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 141/174 (81%)
 Strand = Plus / Minus

                                                                       
Query: 243 acatttctccggatttgagccatcatatccaagaaaagattatatccctcaagtttatat 302
           |||||||| || |||||||||||||| ||||  || ||||| ||||| || || ||||| 
Sbjct: 242 acatttcttcgtatttgagccatcatttccagaaatagattgtatccttcgagcttatac 183

                                                                       
Query: 303 tcgataagggggtctcgttgagcatagccccttaacccaacagcttgttgcacaaacttt 362
           ||||| || || || ||||| ||||| || || | ||| |||||||||||||| ||||| 
Sbjct: 182 tcgatgagtggatcgcgttgcgcatatcctctgagccccacagcttgttgcacgaacttg 123

                                                                 
Query: 363 aaagcttgcaagtgttctttccagagcttatcaatattgcttaggattaggaat 416
           |  ||||| | |||||||||||| | | ||||||||||||| | ||||| ||||
Sbjct: 122 agtgcttgaaggtgttctttccataacctatcaatattgctcaagattaagaat 69
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>emb|Z49124.1|SOSECA S.oleracea chloroplast secA mRNA
          Length = 3739

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 101/125 (80%)
 Strand = Plus / Minus

                                                                        
Query: 261  gccatcatatccaagaaaagattatatccctcaagtttatattcgataagggggtctcgt 320
            |||||||| || | ||||||||| |||||||||||||| ||||| || || || |||| |
Sbjct: 3063 gccatcatttctaggaaaagattgtatccctcaagtttgtattctatgagtggatctctt 3004

                                                                        
Query: 321  tgagcatagccccttaacccaacagcttgttgcacaaactttaaagcttgcaagtgttct 380
            || ||||| || | ||  || |||||||| || ||||| || | ||| ||||||||||| 
Sbjct: 3003 tgtgcatatccacgtaggcctacagcttgctgaacaaatttgatagcctgcaagtgttcc 2944

                 
Query: 381  ttcca 385
            |||||
Sbjct: 2943 ttcca 2939
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>ref|NM_183772.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 285

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 119 agatgcagcttgggctgcaccaagtttcttggcacccttgt 159
           |||||||||||| || ||||||||||| || ||||||||||
Sbjct: 96  agatgcagcttgagcagcaccaagtttgttagcacccttgt 56
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>gb|AC004690.2| Homo sapiens PAC clone RP4-630C24 from 7, complete sequence
          Length = 142123

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 262   ccatcatatccaagaaaagattata 286
             |||||||||||||||||||||||||
Sbjct: 75244 ccatcatatccaagaaaagattata 75268
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>emb|BX827284.1|CNS0A3N9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS32ZD05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 450

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 91/113 (80%)
 Strand = Plus / Minus

                                                                       
Query: 216 ggttggaactgatataccgaataaataacatttctccggatttgagccatcatatccaag 275
           ||||| ||||||||||  || || || |||||||| || |||||||||||||| ||||  
Sbjct: 116 ggttgaaactgatatatggagtatatcacatttcttcgtatttgagccatcatttccaga 57

                                                                
Query: 276 aaaagattatatccctcaagtttatattcgataagggggtctcgttgagcata 328
           || ||||| ||||| || || ||||| ||||| || || || ||||| |||||
Sbjct: 56  aatagattgtatccttcgagcttatactcgatgagtggatcgcgttgcgcata 4
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>gb|AC160339.2| Mus musculus BAC clone RP23-410O11 from chromosome 9, complete sequence
          Length = 174612

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 179    gttctttccagaattttcctcttg 202
              ||||||||||||||||||||||||
Sbjct: 171520 gttctttccagaattttcctcttg 171497
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>gb|AC157598.4| Mus musculus BAC clone RP23-193D3 from chromosome 17, complete sequence
          Length = 222399

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 167   cttttttgaatcgttctttcca 188
             ||||||||||||||||||||||
Sbjct: 45461 cttttttgaatcgttctttcca 45440
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>gb|AY508970.1| Pisum sativum cultivar Torsdag cryptochrome 1 apoprotein (CRY1) gene,
            complete cds
          Length = 4644

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 273  aagaaaagattatatccctca 293
            |||||||||||||||||||||
Sbjct: 3461 aagaaaagattatatccctca 3441
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>gb|AC110816.7| Mus musculus BAC clone RP23-20P15 from chromosome 12, complete sequence
          Length = 216095

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 140    aagtttcttggcacccttgtg 160
              |||||||||||||||||||||
Sbjct: 210334 aagtttcttggcacccttgtg 210354
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 340     caacagcttgttgcacaaact 360
               |||||||||||||||||||||
Sbjct: 5653435 caacagcttgttgcacaaact 5653455
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>gb|AC124492.4| Mus musculus BAC clone RP23-454I23 from chromosome 12, complete
             sequence
          Length = 176782

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 140   aagtttcttggcacccttgtg 160
             |||||||||||||||||||||
Sbjct: 99106 aagtttcttggcacccttgtg 99086
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>emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060E08,
              complete sequence
          Length = 166951

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 184    ttccagaattttcctcttgcttctt 208
              ||||||||||||||||| |||||||
Sbjct: 103684 ttccagaattttcctctagcttctt 103708
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 184      ttccagaattttcctcttgcttctt 208
                ||||||||||||||||| |||||||
Sbjct: 31930818 ttccagaattttcctctagcttctt 31930842
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 31       gtaaactgtaaagagaacatataca 55
                ||||||||||||||||||| |||||
Sbjct: 19591292 gtaaactgtaaagagaacacataca 19591268
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>gb|AC153657.4| Mus musculus BAC clone RP23-324B3 from chromosome 12, complete sequence
          Length = 208058

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 140   aagtttcttggcacccttgtg 160
             |||||||||||||||||||||
Sbjct: 27582 aagtttcttggcacccttgtg 27602
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>dbj|AP005110.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0605D08
          Length = 144340

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 31    gtaaactgtaaagagaacatataca 55
             ||||||||||||||||||| |||||
Sbjct: 57578 gtaaactgtaaagagaacacataca 57554
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>dbj|AP001329.3| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1225D1
          Length = 98595

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 181   tctttccagaattttcctctt 201
             |||||||||||||||||||||
Sbjct: 28827 tctttccagaattttcctctt 28847
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>gb|AC167537.7| Mus musculus chromosome 8, clone RP23-99B10, complete sequence
          Length = 201791

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 200    ttgcttcttcatcacaggtt 219
              ||||||||||||||||||||
Sbjct: 106676 ttgcttcttcatcacaggtt 106695
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>ref|XM_509658.1| PREDICTED: Pan troglodytes similar to ribosome associated membrane
           protein 4 (LOC452571), mRNA
          Length = 1875

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 193 tttcctcttgcttcttcatc 212
           ||||||||||||||||||||
Sbjct: 145 tttcctcttgcttcttcatc 126
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>gb|AC124228.16| Mus musculus chromosome 5, clone RP23-345O14, complete sequence
          Length = 219244

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 79    agccatagctacagaaaaacaaaa 102
             ||||| ||||||||||||||||||
Sbjct: 65494 agccagagctacagaaaaacaaaa 65517
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>gb|AC087546.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0012D19,
             complete sequence
          Length = 153276

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    tacagaaaaacaaaatctca 107
             ||||||||||||||||||||
Sbjct: 37561 tacagaaaaacaaaatctca 37542
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>gb|AC134443.3| Mus musculus BAC clone RP24-107B13 from chromosome 8, complete sequence
          Length = 182604

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 200    ttgcttcttcatcacaggtt 219
              ||||||||||||||||||||
Sbjct: 161673 ttgcttcttcatcacaggtt 161654
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>gb|AC146259.4| Pan troglodytes BAC clone RP43-28H17 from 7, complete sequence
          Length = 156725

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 179   gttctttccagaattttcctcttg 202
             |||||||||||||| |||||||||
Sbjct: 83974 gttctttccagaatattcctcttg 83997
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>gb|AC161216.4| Mus musculus chromosome 7, clone RP23-8K23, complete sequence
          Length = 228889

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     ctgtaaagagaacatataca 55
              ||||||||||||||||||||
Sbjct: 154872 ctgtaaagagaacatataca 154853
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>gb|AC124662.10| Mus musculus chromosome 9, clone RP24-409K22, complete sequence
          Length = 235471

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 195   tcctcttgcttcttcatcacaggt 218
             ||||||||||||| ||||||||||
Sbjct: 34396 tcctcttgcttctacatcacaggt 34419
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>gb|AC091324.10| Mus musculus chromosome 7, clone RP23-7G1, complete sequence
          Length = 225556

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 368    ttgcaagtgttctttccaga 387
              ||||||||||||||||||||
Sbjct: 146668 ttgcaagtgttctttccaga 146649
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>gb|AC004888.1| Homo sapiens PAC clone RP4-797C5 from 7, complete sequence
          Length = 157466

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 179    gttctttccagaattttcctcttg 202
              |||||||||||||| |||||||||
Sbjct: 107868 gttctttccagaatattcctcttg 107845
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>gb|AC117245.3| Mus musculus BAC clone RP24-233B16 from 9, complete sequence
          Length = 177775

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 195    tcctcttgcttcttcatcacaggt 218
              ||||||||||||| ||||||||||
Sbjct: 151149 tcctcttgcttctacatcacaggt 151172
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>gb|AC113309.7| Mus musculus chromosome 6, clone RP23-440D19, complete sequence
          Length = 229553

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    aaactgtaaagagaacatat 52
             ||||||||||||||||||||
Sbjct: 93174 aaactgtaaagagaacatat 93155
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>gb|AC102077.7| Mus musculus chromosome 7, clone RP23-423B21, complete sequence
          Length = 229721

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    ctgtaaagagaacatataca 55
             ||||||||||||||||||||
Sbjct: 51222 ctgtaaagagaacatataca 51203
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>ref|XM_792126.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC592613 (LOC592613), mRNA
          Length = 750

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 197 ctcttgcttcttcatcacag 216
           ||||||||||||||||||||
Sbjct: 678 ctcttgcttcttcatcacag 697
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>emb|AL138960.16| Human DNA sequence from clone RP11-269C23 on chromosome 13, complete
             sequence
          Length = 144836

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   tttcctcttgcttcttcatc 212
             ||||||||||||||||||||
Sbjct: 71483 tttcctcttgcttcttcatc 71464
to top
>emb|AL035423.4|HS20I3 Human DNA sequence from clone RP1-20I3 on chromosome Xq25-26 Contains a
             SNRPN upstream reading frame (SNURF) pseudogene, the
             SLC25A14 gene for solute carrier family 25 (mitochondrial
             carrier, brain),member 14 (UCP5, BMCP1), the gene for
             G-protein coupled receptor 2 (GPCR2), the gene for CGI-79
             protein and a CpG island, complete sequence
          Length = 140094

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   ttttcctcttgcttcttcat 211
             ||||||||||||||||||||
Sbjct: 59429 ttttcctcttgcttcttcat 59448
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>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome
          Length = 1842899

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 234     gaataaataacatttctccg 253
               ||||||||||||||||||||
Sbjct: 1156052 gaataaataacatttctccg 1156071
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>emb|CR859807.1| Pongo pygmaeus mRNA; cDNA DKFZp469F1626 (from clone DKFZp469F1626)
          Length = 2464

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 111 caaactcaagatgcagcttg 130
           ||||||||||||||||||||
Sbjct: 752 caaactcaagatgcagcttg 733
to top
>gb|AC090592.5| Homo sapiens chromosome 11, clone RP11-405K6, complete sequence
          Length = 168469

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 371    caagtgttctttccagagct 390
              ||||||||||||||||||||
Sbjct: 113615 caagtgttctttccagagct 113596
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 31       gtaaactgtaaagagaacat 50
                ||||||||||||||||||||
Sbjct: 23300777 gtaaactgtaaagagaacat 23300758
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 88       tacagaaaaacaaaatctca 107
                ||||||||||||||||||||
Sbjct: 14978942 tacagaaaaacaaaatctca 14978923
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 89       acagaaaaacaaaatctcat 108
                ||||||||||||||||||||
Sbjct: 20482350 acagaaaaacaaaatctcat 20482331
to top
>dbj|AP005169.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0077J18
          Length = 180944

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    acagaaaaacaaaatctcat 108
             ||||||||||||||||||||
Sbjct: 63460 acagaaaaacaaaatctcat 63441
to top
>dbj|BS000216.1| Pan troglodytes chromosome 22 clone:RP43-057N15, map 22, complete
             sequences
          Length = 164711

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    gaattctcaaaatcagcaag 80
             ||||||||||||||||||||
Sbjct: 81695 gaattctcaaaatcagcaag 81676
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>gb|AC131315.16| Mus musculus chromosome 7, clone RP24-535I10, complete sequence
          Length = 213958

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    ctgtaaagagaacatataca 55
             ||||||||||||||||||||
Sbjct: 83921 ctgtaaagagaacatataca 83940
to top
>dbj|AK069124.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006M12, full
           insert sequence
          Length = 959

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  acagaaaaacaaaatctcat 108
           ||||||||||||||||||||
Sbjct: 76  acagaaaaacaaaatctcat 57
to top
>gb|AC007103.4|AC007103 Homo sapiens chromosome 4 clone C0190D22 map 4p16, complete sequence
          Length = 181571

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 370    gcaagtgttctttccagagc 389
              ||||||||||||||||||||
Sbjct: 170526 gcaagtgttctttccagagc 170507
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>dbj|AP001699.1| Homo sapiens genomic DNA, chromosome 21q, section 43/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    gaattctcaaaatcagcaag 80
             ||||||||||||||||||||
Sbjct: 81795 gaattctcaaaatcagcaag 81776
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 88       tacagaaaaacaaaatctca 107
                ||||||||||||||||||||
Sbjct: 14987183 tacagaaaaacaaaatctca 14987164
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 31       gtaaactgtaaagagaacat 50
                ||||||||||||||||||||
Sbjct: 23228968 gtaaactgtaaagagaacat 23228949
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>emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa0011B18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 168063

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     gtaaactgtaaagagaacat 50
              ||||||||||||||||||||
Sbjct: 113895 gtaaactgtaaagagaacat 113876
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>gb|AC168046.7| Mus musculus chromosome 8, clone RP24-335A7, complete sequence
          Length = 160659

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   ttgcttcttcatcacaggtt 219
             ||||||||||||||||||||
Sbjct: 14554 ttgcttcttcatcacaggtt 14573
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>dbj|AP001604.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1648B8, APP-D21S292
              region, complete sequence
          Length = 186930

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     gaattctcaaaatcagcaag 80
              ||||||||||||||||||||
Sbjct: 109582 gaattctcaaaatcagcaag 109563


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,337,935
Number of Sequences: 3902068
Number of extensions: 5337935
Number of successful extensions: 107285
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106879
Number of HSP's gapped (non-prelim): 406
length of query: 416
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 394
effective length of database: 17,147,199,772
effective search space: 6755996710168
effective search space used: 6755996710168
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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