>gb|AC155264.2| Mus musculus BAC clone RP23-281B4 from chromosome 16, complete sequence
          Length = 199531

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 14    caaaaaatcactgcaaaatacaca 37
             ||||||||||||||||| ||||||
Sbjct: 20219 caaaaaatcactgcaaattacaca 20242

>emb|Z50005.1|CEF16H9 Caenorhabditis elegans Cosmid F16H9, complete sequence
          Length = 21721

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 45    aagtgaaacttatctaagcaaaaa 68
             ||||||| ||||||||||||||||
Sbjct: 20972 aagtgaagcttatctaagcaaaaa 20949

>emb|AL030998.1|HS466I8 Human DNA sequence from clone RP3-466I8 on chromosome Xq11.1-13.2
              Contains the 5' end of the HEPH gene for hephaestin,
              complete sequence
          Length = 118226

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 13     gcaaaaaatcactgcaaaatacacagct 40
              ||||||||||| || |||||||||||||
Sbjct: 104863 gcaaaaaatcaatgaaaaatacacagct 104890

>gb|AC166262.3| Mus musculus  BAC RP23-256D10 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 175073

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    caaaatacacagcttacaaa 46
             ||||||||||||||||||||
Sbjct: 22096 caaaatacacagcttacaaa 22077

>gb|AC154568.2| Mus musculus BAC clone RP23-246L11 from chromosome 16, complete sequence
          Length = 182206

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 14     caaaaaatcactgcaaaatacaca 37
              ||||||||||||||||| ||||||
Sbjct: 180293 caaaaaatcactgcaaattacaca 180316

>gb|AC159478.7| Mus musculus 10 BAC RP23-460F17 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 174480

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    caaaatacacagcttacaaa 46
             ||||||||||||||||||||
Sbjct: 49407 caaaatacacagcttacaaa 49426

>gb|AC183598.2| Pan troglodytes BAC clone CH251-455P14 from chromosome 7, complete
             sequence
          Length = 216847

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 15    aaaaaatcactgcaaaata 33
             |||||||||||||||||||
Sbjct: 45844 aaaaaatcactgcaaaata 45826

>gb|AC170739.3| Sorex araneus clone SA_Ba-515F19, complete sequence
          Length = 101541

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 29/31 (93%), Gaps = 1/31 (3%)
 Strand = Plus / Plus

                                            
Query: 18    aaatcactgcaaaatacacagcttacaaagt 48
             |||||||||||| |||||||| |||||||||
Sbjct: 59341 aaatcactgcaagatacacag-ttacaaagt 59370

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 27       caaaatacacagcttacaa 45
                |||||||||||||||||||
Sbjct: 36054588 caaaatacacagcttacaa 36054570

>gb|AC183838.2| Pan troglodytes BAC clone CH251-11K10 from chromosome 7, complete
              sequence
          Length = 153555

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 15     aaaaaatcactgcaaaata 33
              |||||||||||||||||||
Sbjct: 136405 aaaaaatcactgcaaaata 136387

>gb|AC005011.2| Homo sapiens BAC clone GS1-111G14 from 7, complete sequence
          Length = 166069

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 15    aaaaaatcactgcaaaata 33
             |||||||||||||||||||
Sbjct: 68863 aaaaaatcactgcaaaata 68845

>gb|AC122910.5| Mus musculus BAC clone RP23-54P3 from chromosome 6, complete sequence
          Length = 221390

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 16    aaaaatcactgcaaaatacacag 38
             |||||||||||||||| ||||||
Sbjct: 96812 aaaaatcactgcaaaagacacag 96834

>emb|AL627082.8| Human DNA sequence from clone RP4-785J1 on chromosome 1 Contains a
            chromosome 20 open reading frame 52 (C20orf520)
            pseudogene, complete sequence
          Length = 39923

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 54   ttatctaagcaaaaaagtactat 76
            |||| ||||||||||||||||||
Sbjct: 4166 ttatataagcaaaaaagtactat 4144

>gb|AY340639.1| Trifolium pratense ferredoxin I mRNA, complete cds; nuclear gene
           for chloroplast product
          Length = 757

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 39  cttacaaagtgaaacttat 57
           |||||||||||||||||||
Sbjct: 207 cttacaaagtgaaacttat 225

>gb|AC098594.2| Homo sapiens chromosome 4 clone RP11-465C6, complete sequence
          Length = 168860

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 25     tgcaaaatacacagcttacaaag 47
              |||||| ||||||||||||||||
Sbjct: 101294 tgcaaactacacagcttacaaag 101272

>gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete
              sequence
          Length = 164179

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 27     caaaatacacagcttacaa 45
              |||||||||||||||||||
Sbjct: 116099 caaaatacacagcttacaa 116081

>gb|AC149872.2| Xenopus tropicalis clone CH216-115D10, complete sequence
          Length = 194934

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 13   gcaaaaaatcactgcaaaa 31
            |||||||||||||||||||
Sbjct: 8917 gcaaaaaatcactgcaaaa 8935

>emb|CR847543.13| Zebrafish DNA sequence from clone DKEY-183P4 in linkage group 8, complete
              sequence
          Length = 207382

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 26     gcaaaatacacagcttacaaagtgaaa 52
              |||||||||| ||||||||||| ||||
Sbjct: 114394 gcaaaatacaaagcttacaaagagaaa 114420

>gb|AC010561.7| Drosophila melanogaster 3L BAC RP98-21A2 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 171451

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 15    aaaaaatcactgcaaaata 33
             |||||||||||||||||||
Sbjct: 94614 aaaaaatcactgcaaaata 94632

>gb|AC104627.8| Drosophila melanogaster X BAC RP98-4A11 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 187921

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 15     aaaaaatcactgcaaaata 33
              |||||||||||||||||||
Sbjct: 167004 aaaaaatcactgcaaaata 166986

>gb|AC079914.8| Homo sapiens chromosome 11, clone RP11-479C24, complete sequence
          Length = 91995

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 10    gatgcaaaaaatcactgcaaaat 32
             ||||||||||||||||| |||||
Sbjct: 55559 gatgcaaaaaatcactgaaaaat 55581

>gb|AC011405.6| Homo sapiens chromosome 5 clone CTB-46B19, complete sequence
          Length = 184541

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 15    aaaaaatcactgcaaaata 33
             |||||||||||||||||||
Sbjct: 36127 aaaaaatcactgcaaaata 36109

>gb|AC008490.6| Homo sapiens chromosome 5 clone CTC-426I14, complete sequence
          Length = 113213

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 15    aaaaaatcactgcaaaata 33
             |||||||||||||||||||
Sbjct: 41985 aaaaaatcactgcaaaata 42003

>gb|BC109478.1| Bos taurus cDNA clone MGC:133685 IMAGE:8048928, complete cds
          Length = 1382

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   aacttatctaagcaaaaaa 69
            |||||||||||||||||||
Sbjct: 1354 aacttatctaagcaaaaaa 1372

>gb|AC008513.7|AC008513 Homo sapiens chromosome 5 clone CTC-455C23, complete sequence
          Length = 224058

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 15    aaaaaatcactgcaaaata 33
             |||||||||||||||||||
Sbjct: 73558 aaaaaatcactgcaaaata 73540

>gb|AC017092.4|AC017092 Homo sapiens BAC clone RP11-510D22 from 5, complete sequence
          Length = 180072

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 15    aaaaaatcactgcaaaata 33
             |||||||||||||||||||
Sbjct: 64227 aaaaaatcactgcaaaata 64245

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 27       caaaatacacagcttacaa 45
                |||||||||||||||||||
Sbjct: 36144662 caaaatacacagcttacaa 36144644

>dbj|AK100706.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023115B06, full
            insert sequence
          Length = 4301

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 27   caaaatacacagcttacaa 45
            |||||||||||||||||||
Sbjct: 4193 caaaatacacagcttacaa 4175

>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 59     taagcaaaaaagtactatc 77
              |||||||||||||||||||
Sbjct: 897828 taagcaaaaaagtactatc 897810

>gb|AC133209.4| Mus musculus BAC clone RP23-21E5 from chromosome 3, complete sequence
          Length = 164837

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 17    aaaatcactgcaaaataca 35
             |||||||||||||||||||
Sbjct: 45999 aaaatcactgcaaaataca 46017

>gb|AE003490.3| Drosophila melanogaster chromosome X, section 42 of 74 of the complete
              sequence
          Length = 302665

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 15     aaaaaatcactgcaaaata 33
              |||||||||||||||||||
Sbjct: 248575 aaaaaatcactgcaaaata 248557

>gb|AE003476.3| Drosophila melanogaster chromosome 3L, section 10 of 83 of the complete
              sequence
          Length = 304419

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 15     aaaaaatcactgcaaaata 33
              |||||||||||||||||||
Sbjct: 239213 aaaaaatcactgcaaaata 239231

>ref|NM_001038089.1| Bos taurus similar to Cysteine-rich secretory protein 2 precursor
            (CRISP-2) (Testis-specific protein TPX-1) (MGC133685),
            mRNA
          Length = 1382

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 51   aacttatctaagcaaaaaa 69
            |||||||||||||||||||
Sbjct: 1354 aacttatctaagcaaaaaa 1372

>gb|AY884207.1| Homo sapiens catenin (cadherin-associated protein), alpha 1, 102kDa
              (CTNNA1) gene, complete cds
          Length = 155983

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 15     aaaaaatcactgcaaaata 33
              |||||||||||||||||||
Sbjct: 122152 aaaaaatcactgcaaaata 122134

>emb|AL845171.5| Mouse DNA sequence from clone RP23-38N8 on chromosome 4, complete
             sequence
          Length = 229784

 Score = 38.2 bits (19), Expect = 4.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 55    tatctaagcaaaaaagtactatc 77
             |||||| ||||||||||||||||
Sbjct: 17667 tatctatgcaaaaaagtactatc 17689


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 962,421
Number of Sequences: 3902068
Number of extensions: 962421
Number of successful extensions: 65289
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 65176
Number of HSP's gapped (non-prelim): 114
length of query: 94
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 73
effective length of database: 17,151,101,840
effective search space: 1252030434320
effective search space used: 1252030434320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)