ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl41h06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds 424 e-116
2gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRN... 416 e-113
3gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full... 107 1e-20
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 94 2e-16
5emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 94 2e-16
6gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genom... 94 2e-16
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 94 2e-16
8dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 2e-16
9ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA 92 8e-16
10gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds 84 2e-13
11gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds 84 2e-13
12gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-... 84 2e-13
13gb|AY720897.2| Triticum aestivum lipoxygenase gene, partial sequ... 76 5e-11
14ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA 68 1e-08
15gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosom... 68 1e-08
16gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genom... 68 1e-08
17ref|XM_469412.1| Oryza sativa (japonica cultivar-group), mRNA 64 2e-07
18ref|XM_469411.1| Oryza sativa (japonica cultivar-group), mRNA 64 2e-07
19gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual posit... 64 2e-07
20dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 2e-07
21dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 2e-07
22dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 2e-07
23dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 2e-07
24gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partia... 62 7e-07
25gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full ... 60 3e-06
26gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complet... 56 5e-05
27gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, co... 56 5e-05
28gb|DQ428248.1| Sorghum propinquum locus PRC0271 genomic sequence 52 7e-04
29gb|DQ428247.1| Sorghum bicolor voucher PI585454 locus PRC0271 ge... 52 7e-04
30gb|DQ428246.1| Sorghum bicolor voucher PI267539 locus PRC0271 ge... 52 7e-04
31gb|DQ428245.1| Sorghum bicolor voucher PI267408 locus PRC0271 ge... 52 7e-04
32gb|DQ428244.1| Sorghum bicolor voucher PI221607 locus PRC0271 ge... 52 7e-04
33gb|DQ428243.1| Sorghum bicolor voucher PI152702 locus PRC0271 ge... 52 7e-04
34gb|DQ428242.1| Sorghum bicolor voucher NSL92371 locus PRC0271 ge... 52 7e-04
35gb|DQ428241.1| Sorghum bicolor voucher NSL87902 locus PRC0271 ge... 52 7e-04
36gb|DQ428240.1| Sorghum bicolor voucher NSL87666 locus PRC0271 ge... 52 7e-04
37gb|DQ428239.1| Sorghum bicolor voucher NSL77217 locus PRC0271 ge... 52 7e-04
38gb|DQ428238.1| Sorghum bicolor voucher NSL77034 locus PRC0271 ge... 52 7e-04
39gb|DQ428237.1| Sorghum bicolor voucher NSL55243 locus PRC0271 ge... 52 7e-04
40gb|DQ428236.1| Sorghum bicolor voucher NSL51365 locus PRC0271 ge... 52 7e-04
41gb|DQ428235.1| Sorghum bicolor voucher NSL51030 locus PRC0271 ge... 52 7e-04
42gb|DQ428234.1| Sorghum bicolor voucher BTx623 locus PRC0271 geno... 52 7e-04
43gb|AY103567.1| Zea mays PCO116252 mRNA sequence 52 7e-04
44dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.011
45gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 48 0.011
46emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa... 48 0.011
47gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible l... 48 0.011
48emb|AJ507213.1|HVU507213 Hordeum vulgare mRNA for lipoxygenase 2... 46 0.044
49ref|XM_464447.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.17
50gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 geno... 44 0.17
51gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.17
52dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.17
53dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.17
54dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.17
55dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.17
56gb|AY111869.1| Zea mays CL452_-8 mRNA sequence 44 0.17
57gb|AY110522.1| Zea mays CL4677_2 mRNA sequence 44 0.17
58gb|AY104322.1| Zea mays PCO093659 mRNA sequence 44 0.17
59gb|AC109929.2| Oryza sativa (japonica cultivar-group) chromosome... 40 2.7
60emb|AL078613.10|HSA354I12 Human DNA sequence from clone RP11-354... 40 2.7
61dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.7
62gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome... 40 2.7
63dbj|AK109440.2| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.7
64dbj|AK121637.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.7
65dbj|AK073570.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.7
66gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 2.7
67emb|AL954813.14| Mouse DNA sequence from clone RP24-541E15 on ch... 40 2.7
68gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome... 40 2.7 
>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds
          Length = 2818

 Score =  424 bits (214), Expect = e-116
 Identities = 214/214 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    ggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactgtcac 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2799 ggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactgtcac 2740

                                                                        
Query: 61   agacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattcat 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2739 agacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattcat 2680

                                                                        
Query: 121  ccatggttgccgatggcttagattagatggagatgctgttggggatgcccttggcggtaa 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2679 ccatggttgccgatggcttagattagatggagatgctgttggggatgcccttggcggtaa 2620

                                              
Query: 181  gcccggcagcggcgcccttgtggtcggaggtgtt 214
            ||||||||||||||||||||||||||||||||||
Sbjct: 2619 gcccggcagcggcgcccttgtggtcggaggtgtt 2586
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>gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRNA, partial cds
          Length = 1331

 Score =  416 bits (210), Expect = e-113
 Identities = 213/214 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    ggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactgtcac 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1228 ggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactgtcac 1169

                                                                        
Query: 61   agacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattcat 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1168 agacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattcat 1109

                                                                        
Query: 121  ccatggttgccgatggcttagattagatggagatgctgttggggatgcccttggcggtaa 180
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1108 ccatggttgccgatggcttaaattagatggagatgctgttggggatgcccttggcggtaa 1049

                                              
Query: 181  gcccggcagcggcgcccttgtggtcggaggtgtt 214
            ||||||||||||||||||||||||||||||||||
Sbjct: 1048 gcccggcagcggcgcccttgtggtcggaggtgtt 1015
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>gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full insert mRNA
           sequence
          Length = 1020

 Score =  107 bits (54), Expect = 1e-20
 Identities = 66/70 (94%)
 Strand = Plus / Minus

                                                                       
Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204
           |||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| |
Sbjct: 751 agatggagatgctgttggggatgcccttagcggtgagcccggcggcggcgcccttgtgat 692

                     
Query: 205 cggaggtgtt 214
           ||||||||||
Sbjct: 691 cggaggtgtt 682
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 68/75 (90%)
 Strand = Plus / Minus

                                                                            
Query: 140      agattagatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgccctt 199
                |||| |||||||||||||||||||||||||| ||||||  || ||||||||| |||||||
Sbjct: 30026452 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 30026393

                               
Query: 200      gtggtcggaggtgtt 214
                | |||||||||||||
Sbjct: 30026392 gaggtcggaggtgtt 30026378



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                            
Query: 145      agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204
                |||| ||||||||||||||||||||||||||||| |  ||||| ||||||||  ||  ||
Sbjct: 27803105 agatcgagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgt 27803046

                          
Query: 205      cggaggtgtt 214
                ||||||||||
Sbjct: 27803045 cggaggtgtt 27803036



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                        
Query: 145      agatggagatgctgttggggatgcccttggcggtaagccc 184
                |||||||||||||||||||||||||| ||||||| |||||
Sbjct: 27821684 agatggagatgctgttggggatgcccatggcggtgagccc 27821645



 Score = 44.1 bits (22), Expect = 0.17
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 147      atggagatgctgttggggatgccctt 172
                |||| |||||||||||||||||||||
Sbjct: 14300022 atggtgatgctgttggggatgccctt 14300047



 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 140     agattagatggagatgctgttggg 163
               |||| |||||||||||||||||||
Sbjct: 4174771 agatcagatggagatgctgttggg 4174748
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>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2
          Length = 2830

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 68/75 (90%)
 Strand = Plus / Minus

                                                                        
Query: 140  agattagatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgccctt 199
            |||| |||||||||||||||||||||||||| ||||||  || ||||||||| |||||||
Sbjct: 2698 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 2639

                           
Query: 200  gtggtcggaggtgtt 214
            | |||||||||||||
Sbjct: 2638 gaggtcggaggtgtt 2624
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>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete
             sequence
          Length = 155106

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 68/75 (90%)
 Strand = Plus / Plus

                                                                         
Query: 140   agattagatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgccctt 199
             |||| |||||||||||||||||||||||||| ||||||  || ||||||||| |||||||
Sbjct: 81299 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 81358

                            
Query: 200   gtggtcggaggtgtt 214
             | |||||||||||||
Sbjct: 81359 gaggtcggaggtgtt 81373
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 68/75 (90%)
 Strand = Plus / Minus

                                                                            
Query: 140      agattagatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgccctt 199
                |||| |||||||||||||||||||||||||| ||||||  || ||||||||| |||||||
Sbjct: 30117874 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 30117815

                               
Query: 200      gtggtcggaggtgtt 214
                | |||||||||||||
Sbjct: 30117814 gaggtcggaggtgtt 30117800



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                            
Query: 145      agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204
                |||| ||||||||||||||||||||||||||||| |  ||||| ||||||||  ||  ||
Sbjct: 27894429 agatcgagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgt 27894370

                          
Query: 205      cggaggtgtt 214
                ||||||||||
Sbjct: 27894369 cggaggtgtt 27894360



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                        
Query: 145      agatggagatgctgttggggatgcccttggcggtaagccc 184
                |||||||||||||||||||||||||| ||||||| |||||
Sbjct: 27913008 agatggagatgctgttggggatgcccatggcggtgagccc 27912969



 Score = 44.1 bits (22), Expect = 0.17
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 147      atggagatgctgttggggatgccctt 172
                |||| |||||||||||||||||||||
Sbjct: 14294997 atggtgatgctgttggggatgccctt 14295022



 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 140     agattagatggagatgctgttggg 163
               |||| |||||||||||||||||||
Sbjct: 4174880 agatcagatggagatgctgttggg 4174857
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>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full
            insert sequence
          Length = 2928

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 68/75 (90%)
 Strand = Plus / Minus

                                                                        
Query: 140  agattagatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgccctt 199
            |||| |||||||||||||||||||||||||| ||||||  || ||||||||| |||||||
Sbjct: 2731 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 2672

                           
Query: 200  gtggtcggaggtgtt 214
            | |||||||||||||
Sbjct: 2671 gaggtcggaggtgtt 2657
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>ref|XM_469655.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2613

 Score = 91.7 bits (46), Expect = 8e-16
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                        
Query: 145  agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204
            |||||||||||||||||||||||||| ||||||  || ||||||||| |||||||| |||
Sbjct: 2611 agatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggt 2552

                      
Query: 205  cggaggtgtt 214
            ||||||||||
Sbjct: 2551 cggaggtgtt 2542
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>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds
          Length = 5013

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                        
Query: 145  agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204
            ||||||||||||||||||||||||||||||| || ||||| || ||||||||  ||||||
Sbjct: 4660 agatggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtggt 4601

                      
Query: 205  cggaggtgtt 214
            | ||||||||
Sbjct: 4600 cagaggtgtt 4591
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>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds
          Length = 2595

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                        
Query: 145  agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204
            ||||||||||||||||||||||||||||||| || ||||| || ||||||||  ||||||
Sbjct: 2593 agatggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtggt 2534

                      
Query: 205  cggaggtgtt 214
            | ||||||||
Sbjct: 2533 cagaggtgtt 2524
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>gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-L2 allele, partial cds
          Length = 2267

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                        
Query: 145  agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204
            ||||||||||||||||||||||||||||||| || ||||| || ||||||||  ||||||
Sbjct: 2062 agatggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtggt 2003

                      
Query: 205  cggaggtgtt 214
            | ||||||||
Sbjct: 2002 cagaggtgtt 1993
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>gb|AY720897.2| Triticum aestivum lipoxygenase gene, partial sequence
          Length = 934

 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                       
Query: 153 atgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggaggtg 212
           |||||||||||||||||||||||||| || ||||| ||||| |||||||||||  |||||
Sbjct: 1   atgctgttggggatgcccttggcggtgaggccggcggcggcacccttgtggtcttaggtg 60

             
Query: 213 tt 214
           ||
Sbjct: 61  tt 62
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>ref|XM_469409.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2601

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                        
Query: 145  agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204
            |||| ||||||||||||||||||||||||||||| |  ||||| ||||||||  ||  ||
Sbjct: 2599 agatcgagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgt 2540

                      
Query: 205  cggaggtgtt 214
            ||||||||||
Sbjct: 2539 cggaggtgtt 2530
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>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                         
Query: 145   agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204
             |||| ||||||||||||||||||||||||||||| |  ||||| ||||||||  ||  ||
Sbjct: 47235 agatcgagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgt 47176

                       
Query: 205   cggaggtgtt 214
             ||||||||||
Sbjct: 47175 cggaggtgtt 47166



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                     
Query: 145   agatggagatgctgttggggatgcccttggcggtaagccc 184
             |||||||||||||||||||||||||| ||||||| |||||
Sbjct: 65814 agatggagatgctgttggggatgcccatggcggtgagccc 65775
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>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete
             sequence
          Length = 119329

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                         
Query: 145   agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204
             |||| ||||||||||||||||||||||||||||| |  ||||| ||||||||  ||  ||
Sbjct: 10788 agatcgagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgt 10847

                       
Query: 205   cggaggtgtt 214
             ||||||||||
Sbjct: 10848 cggaggtgtt 10857
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>ref|XM_469412.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2686

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 145  agatggagatgctgttggggatgcccttggcggtaagccc 184
            |||||||||||||||||||||||||| ||||||| |||||
Sbjct: 2444 agatggagatgctgttggggatgcccatggcggtgagccc 2405
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>ref|XM_469411.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3165

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 145  agatggagatgctgttggggatgcccttggcggtaagccc 184
            |||||||||||||||||||||||||| ||||||| |||||
Sbjct: 2923 agatggagatgctgttggggatgcccatggcggtgagccc 2884
to top
>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity
            lipoxygenase mRNA, complete cds
          Length = 3154

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 145  agatggagatgctgttggggatgcccttggcggtaagccc 184
            |||||||||||||||||||||||||| ||||||| |||||
Sbjct: 2917 agatggagatgctgttggggatgcccatggcggtgagccc 2878
to top
>dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H08, full
            insert sequence
          Length = 1560

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 145  agatggagatgctgttggggatgcccttggcggtaagccc 184
            |||||||||||||||||||||||||| ||||||| |||||
Sbjct: 1330 agatggagatgctgttggggatgcccatggcggtgagccc 1291
to top
>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full
            insert sequence
          Length = 2851

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 145  agatggagatgctgttggggatgcccttggcggtaagccc 184
            |||||||||||||||||||||||||| ||||||| |||||
Sbjct: 2595 agatggagatgctgttggggatgcccatggcggtgagccc 2556
to top
>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full
            insert sequence
          Length = 3167

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 145  agatggagatgctgttggggatgcccttggcggtaagccc 184
            |||||||||||||||||||||||||| ||||||| |||||
Sbjct: 2925 agatggagatgctgttggggatgcccatggcggtgagccc 2886
to top
>dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079P11, full
            insert sequence
          Length = 1726

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 145  agatggagatgctgttggggatgcccttggcggtaagccc 184
            |||||||||||||||||||||||||| ||||||| |||||
Sbjct: 1495 agatggagatgctgttggggatgcccatggcggtgagccc 1456
to top
>gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partial cds
          Length = 1814

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 31/31 (100%)
 Strand = Plus / Minus

                                           
Query: 145  agatggagatgctgttggggatgcccttggc 175
            |||||||||||||||||||||||||||||||
Sbjct: 1554 agatggagatgctgttggggatgcccttggc 1524
to top
>gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full insert mRNA
           sequence
          Length = 1129

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 145 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204
           |||||||||||||||||||||||||| |||| || |||||  | ||   |||| ||||||
Sbjct: 904 agatggagatgctgttggggatgcccctggccgtgagcccctcggcctggcccgtgtggt 845

                     
Query: 205 cggaggtgtt 214
           ||||||||||
Sbjct: 844 cggaggtgtt 835
to top
>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds
          Length = 2845

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                        
Query: 147  atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206
            |||||||||||||| || |||||||||||||| |  ||||| ||| |||||||   ||||
Sbjct: 2618 atggagatgctgtttggaatgcccttggcggtgatgccggcggcgtcgcccttcgtgtcg 2559

                    
Query: 207  gaggtgtt 214
            ||||||||
Sbjct: 2558 gaggtgtt 2551
to top
>gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, complete cds
          Length = 3003

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 145  agatggagatgctgttggggatgcccttggcggtaagccc 184
            ||||||||| |||||||||||||||| ||||||| |||||
Sbjct: 2762 agatggagacgctgttggggatgcccatggcggtgagccc 2723
to top
>gb|DQ428248.1| Sorghum propinquum locus PRC0271 genomic sequence
          Length = 810

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 145 agatggagatgctgttggggatgcccttggcggt 178
           |||||||||||||||| || ||||||||||||||
Sbjct: 794 agatggagatgctgtttggaatgcccttggcggt 761
to top
>gb|DQ428247.1| Sorghum bicolor voucher PI585454 locus PRC0271 genomic sequence
          Length = 805

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 145 agatggagatgctgttggggatgcccttggcggt 178
           |||||||||||||||| || ||||||||||||||
Sbjct: 789 agatggagatgctgtttggaatgcccttggcggt 756
to top
>gb|DQ428246.1| Sorghum bicolor voucher PI267539 locus PRC0271 genomic sequence
          Length = 805

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 145 agatggagatgctgttggggatgcccttggcggt 178
           |||||||||||||||| || ||||||||||||||
Sbjct: 789 agatggagatgctgtttggaatgcccttggcggt 756
to top
>gb|DQ428245.1| Sorghum bicolor voucher PI267408 locus PRC0271 genomic sequence
          Length = 805

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 145 agatggagatgctgttggggatgcccttggcggt 178
           |||||||||||||||| || ||||||||||||||
Sbjct: 789 agatggagatgctgtttggaatgcccttggcggt 756
to top
>gb|DQ428244.1| Sorghum bicolor voucher PI221607 locus PRC0271 genomic sequence
          Length = 805

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 145 agatggagatgctgttggggatgcccttggcggt 178
           |||||||||||||||| || ||||||||||||||
Sbjct: 789 agatggagatgctgtttggaatgcccttggcggt 756
to top
>gb|DQ428243.1| Sorghum bicolor voucher PI152702 locus PRC0271 genomic sequence
          Length = 805

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 145 agatggagatgctgttggggatgcccttggcggt 178
           |||||||||||||||| || ||||||||||||||
Sbjct: 789 agatggagatgctgtttggaatgcccttggcggt 756
to top
>gb|DQ428242.1| Sorghum bicolor voucher NSL92371 locus PRC0271 genomic sequence
          Length = 805

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 145 agatggagatgctgttggggatgcccttggcggt 178
           |||||||||||||||| || ||||||||||||||
Sbjct: 789 agatggagatgctgtttggaatgcccttggcggt 756
to top
>gb|DQ428241.1| Sorghum bicolor voucher NSL87902 locus PRC0271 genomic sequence
          Length = 805

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 145 agatggagatgctgttggggatgcccttggcggt 178
           |||||||||||||||| || ||||||||||||||
Sbjct: 789 agatggagatgctgtttggaatgcccttggcggt 756
to top
>gb|DQ428240.1| Sorghum bicolor voucher NSL87666 locus PRC0271 genomic sequence
          Length = 805

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 145 agatggagatgctgttggggatgcccttggcggt 178
           |||||||||||||||| || ||||||||||||||
Sbjct: 789 agatggagatgctgtttggaatgcccttggcggt 756
to top
>gb|DQ428239.1| Sorghum bicolor voucher NSL77217 locus PRC0271 genomic sequence
          Length = 805

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 145 agatggagatgctgttggggatgcccttggcggt 178
           |||||||||||||||| || ||||||||||||||
Sbjct: 789 agatggagatgctgtttggaatgcccttggcggt 756
to top
>gb|DQ428238.1| Sorghum bicolor voucher NSL77034 locus PRC0271 genomic sequence
          Length = 805

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 145 agatggagatgctgttggggatgcccttggcggt 178
           |||||||||||||||| || ||||||||||||||
Sbjct: 789 agatggagatgctgtttggaatgcccttggcggt 756
to top
>gb|DQ428237.1| Sorghum bicolor voucher NSL55243 locus PRC0271 genomic sequence
          Length = 805

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 145 agatggagatgctgttggggatgcccttggcggt 178
           |||||||||||||||| || ||||||||||||||
Sbjct: 789 agatggagatgctgtttggaatgcccttggcggt 756
to top
>gb|DQ428236.1| Sorghum bicolor voucher NSL51365 locus PRC0271 genomic sequence
          Length = 805

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 145 agatggagatgctgttggggatgcccttggcggt 178
           |||||||||||||||| || ||||||||||||||
Sbjct: 789 agatggagatgctgtttggaatgcccttggcggt 756
to top
>gb|DQ428235.1| Sorghum bicolor voucher NSL51030 locus PRC0271 genomic sequence
          Length = 805

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 145 agatggagatgctgttggggatgcccttggcggt 178
           |||||||||||||||| || ||||||||||||||
Sbjct: 789 agatggagatgctgtttggaatgcccttggcggt 756
to top
>gb|DQ428234.1| Sorghum bicolor voucher BTx623 locus PRC0271 genomic sequence
          Length = 805

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 145 agatggagatgctgttggggatgcccttggcggt 178
           |||||||||||||||| || ||||||||||||||
Sbjct: 789 agatggagatgctgtttggaatgcccttggcggt 756
to top
>gb|AY103567.1| Zea mays PCO116252 mRNA sequence
          Length = 3135

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 147  atggagatgctgttggggatgcccttggcggtaagccc 184
            ||||||||||||||||| |||||| |||| ||||||||
Sbjct: 2896 atggagatgctgttgggaatgcccatggcagtaagccc 2859
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 147      atggagatgctgttggggatgccc 170
                ||||||||||||||||||||||||
Sbjct: 22970456 atggagatgctgttggggatgccc 22970433
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 147      atggagatgctgttggggatgccc 170
                ||||||||||||||||||||||||
Sbjct: 22898647 atggagatgctgttggggatgccc 22898624
to top
>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 155568

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 147   atggagatgctgttggggatgccc 170
             ||||||||||||||||||||||||
Sbjct: 79733 atggagatgctgttggggatgccc 79710
to top
>gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible lipoxygenase 2 mRNA,
            complete cds
          Length = 3054

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 147  atggagatgctgttggggatgccc 170
            ||||||||||||||||||||||||
Sbjct: 2912 atggagatgctgttggggatgccc 2889
to top
>emb|AJ507213.1|HVU507213 Hordeum vulgare mRNA for lipoxygenase 2 (lox2:Hv:3 gene)
          Length = 2967

 Score = 46.1 bits (23), Expect = 0.044
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 147  atggagatgctgttggggatgcc 169
            |||||||||||||||||||||||
Sbjct: 2770 atggagatgctgttggggatgcc 2748
to top
>ref|XM_464447.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3123

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 145  agatggagatgctgttggggatgccc 170
            |||||||||||||||| |||||||||
Sbjct: 2879 agatggagatgctgtttgggatgccc 2854
to top
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete
             sequence
          Length = 158714

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 147   atggagatgctgttggggatgccctt 172
             |||| |||||||||||||||||||||
Sbjct: 49251 atggtgatgctgttggggatgccctt 49276
to top
>gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAb0012F18,
              complete sequence
          Length = 122159

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 147    atggagatgctgttggggatgccctt 172
              |||| |||||||||||||||||||||
Sbjct: 111410 atggtgatgctgttggggatgccctt 111435
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 145     agatggagatgctgttggggatgccc 170
               |||||||||||||||| |||||||||
Sbjct: 5276965 agatggagatgctgtttgggatgccc 5276990
to top
>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1225_F07
          Length = 142772

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 145  agatggagatgctgttggggatgccc 170
            |||||||||||||||| |||||||||
Sbjct: 3268 agatggagatgctgtttgggatgccc 3293
to top
>dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074B03, full
            insert sequence
          Length = 3160

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 145  agatggagatgctgttggggatgccc 170
            |||||||||||||||| |||||||||
Sbjct: 2878 agatggagatgctgtttgggatgccc 2853
to top
>dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-B01, full
            insert sequence
          Length = 2250

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 145  agatggagatgctgttggggatgccc 170
            |||||||||||||||| |||||||||
Sbjct: 2040 agatggagatgctgtttgggatgccc 2015
to top
>gb|AY111869.1| Zea mays CL452_-8 mRNA sequence
          Length = 568

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 147 atggagatgctgttggggatgcccttggcggtaagccc 184
           ||||||||||||||||| |||||| |||| || |||||
Sbjct: 363 atggagatgctgttgggaatgcccatggcagtgagccc 326
to top
>gb|AY110522.1| Zea mays CL4677_2 mRNA sequence
          Length = 1304

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 145 agatggagatgctgttggggatgccc 170
           |||||||||||||| |||||||||||
Sbjct: 136 agatggagatgctgctggggatgccc 161
to top
>gb|AY104322.1| Zea mays PCO093659 mRNA sequence
          Length = 1439

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 145  agatggagatgctgttggggatgccc 170
            |||||||||||||| |||||||||||
Sbjct: 1212 agatggagatgctgctggggatgccc 1187
to top
>gb|AC109929.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0093J03, complete sequence
          Length = 200626

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 155    gctgttggggatgcccttggcggt 178
              ||||||||||||||||||| ||||
Sbjct: 137475 gctgttggggatgcccttgccggt 137452
to top
>emb|AL078613.10|HSA354I12 Human DNA sequence from clone RP11-354I12 on chromosome 22 Contains an
             STS and GSSs, complete sequence
          Length = 60837

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    cacagacacacactacacca 77
             ||||||||||||||||||||
Sbjct: 58806 cacagacacacactacacca 58825
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 155      gctgttggggatgcccttggcggt 178
                ||||||||||||||||||| ||||
Sbjct: 20830414 gctgttggggatgcccttgccggt 20830391
to top
>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0050H14, complete sequence
          Length = 142245

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 140   agattagatggagatgctgttggg 163
             |||| |||||||||||||||||||
Sbjct: 75408 agatcagatggagatgctgttggg 75385
to top
>dbj|AK109440.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-A07, full
            insert sequence
          Length = 1212

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 140  agattagatggagatgctgttggg 163
            |||| |||||||||||||||||||
Sbjct: 1125 agatcagatggagatgctgttggg 1102
to top
>dbj|AK121637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052A03, full
            insert sequence
          Length = 3067

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 140  agattagatggagatgctgttggg 163
            |||| |||||||||||||||||||
Sbjct: 2960 agatcagatggagatgctgttggg 2937
to top
>dbj|AK073570.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046P13, full
            insert sequence
          Length = 3010

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 155  gctgttggggatgcccttggcggt 178
            ||||||||||||||||||| ||||
Sbjct: 2681 gctgttggggatgcccttgccggt 2658
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 155      gctgttggggatgcccttggcggt 178
                ||||||||||||||||||| ||||
Sbjct: 21140649 gctgttggggatgcccttgccggt 21140626
to top
>emb|AL954813.14| Mouse DNA sequence from clone RP24-541E15 on chromosome 4, complete
             sequence
          Length = 140383

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    cacagacacacactacacca 77
             ||||||||||||||||||||
Sbjct: 40251 cacagacacacactacacca 40232
to top
>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBb0076N15, complete sequence
          Length = 134307

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 140  agattagatggagatgctgttggg 163
            |||| |||||||||||||||||||
Sbjct: 3386 agatcagatggagatgctgttggg 3363


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,913,682
Number of Sequences: 3902068
Number of extensions: 1913682
Number of successful extensions: 218419
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 217838
Number of HSP's gapped (non-prelim): 580
length of query: 214
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 192
effective length of database: 17,147,199,772
effective search space: 3292262356224
effective search space used: 3292262356224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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