ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl41h03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY104411.1| Zea mays PCO124128 mRNA sequence 220 3e-54
2gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome... 200 3e-48
3gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome... 200 3e-48
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 200 3e-48
5gb|AF344453.1|AF344453 Oryza sativa SET1 (SET1) mRNA, complete cds 200 3e-48
6dbj|AK102379.1| Oryza sativa (japonica cultivar-group) cDNA clon... 200 3e-48
7dbj|AK059336.1| Oryza sativa (japonica cultivar-group) cDNA clon... 200 3e-48
8gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 200 3e-48
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 100 8e-18
10gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare str... 100 8e-18
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 100 8e-18
12gb|AY596552.1| Saccharum officinarum clone SCCCRZ2001G10, comple... 64 4e-07
13gb|AY093419.1| Zea mays SET domain protein 105 (set105) mRNA, co... 56 1e-04
14ref|NM_191045.1| Oryza sativa (japonica cultivar-group), predic... 56 1e-04
15dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
16dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
17dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
18dbj|AK065227.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
19gb|AY112212.1| Zea mays CL3507_2 mRNA sequence 56 1e-04
20gb|AY187718.2| Zea mays SET domain protein SDG111 mRNA, complete... 48 0.026
21gb|BT024023.1| Zea mays clone EL01N0414B01 mRNA sequence 48 0.026
22gb|AY109913.1| Zea mays CL3507_1 mRNA sequence 48 0.026
23emb|CR847981.15| Zebrafish DNA sequence from clone CH211-195H23 ... 46 0.10
24ref|NM_126603.1| Arabidopsis thaliana histone-lysine N-methyltra... 44 0.41
25ref|NM_101640.1| Arabidopsis thaliana SUVH7 (SU(VAR)3-9 HOMOLOG ... 44 0.41
26ref|NM_128034.2| Arabidopsis thaliana SDG21 (SET DOMAIN GROUP 21... 44 0.41
27gb|AC141107.5| Medicago truncatula clone mth2-34a12, complete se... 44 0.41
28gb|AC007266.5| Arabidopsis thaliana chromosome 2 clone F27A10 ma... 44 0.41
29gb|AC005970.3| Arabidopsis thaliana chromosome 2 clone T6P5 map ... 44 0.41
30gb|AF344451.1|AF344451 Arabidopsis thaliana SUVH8 (SUVH8) gene, ... 44 0.41
31gb|AF344450.1|AF344450 Arabidopsis thaliana SUVH7 (SUVH7) mRNA, ... 44 0.41
32gb|AC034106.4|F2H15 Sequence of BAC F2H15 from Arabidopsis thali... 44 0.41
33gb|AC073618.48| Homo sapiens 12 BAC RP11-313E9 (Roswell Park Can... 42 1.6
34gb|AC170189.2| Mus musculus BAC clone RP23-103L12 from chromosom... 40 6.4
35ref|NM_196119.1| Oryza sativa (japonica cultivar-group) hypothet... 40 6.4
36gb|BT012756.1| Lycopersicon esculentum clone 113700R, mRNA sequence 40 6.4
37gb|AC123947.5| Mus musculus BAC clone RP23-103O6 from chromosome... 40 6.4
38gb|AC161381.2| Mus musculus BAC clone RP23-166L22 from chromosom... 40 6.4
39gb|AC122934.2| Mus musculus BAC clone RP23-19A13 from 3, complet... 40 6.4
40gb|CP000302.1| Shewanella denitrificans OS217, complete genome 40 6.4
41gb|AC134516.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
42gb|AC107314.1| Oryza sativa (japonica cultivar-group) cultivar N... 40 6.4
43dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
44emb|BX932790.1| Gallus gallus finished cDNA, clone ChEST276e2 40 6.4
45gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome 40 6.4
46emb|CR548642.6| Zebrafish DNA sequence from clone DKEYP-99B3 in ... 40 6.4
47emb|BX510372.6| Zebrafish DNA sequence from clone CH211-243J20 i... 40 6.4
48gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4 
>gb|AY104411.1| Zea mays PCO124128 mRNA sequence
          Length = 1300

 Score =  220 bits (111), Expect = 3e-54
 Identities = 133/139 (95%), Gaps = 1/139 (0%)
 Strand = Plus / Minus

                                                                       
Query: 335 tctgaccataatcatatgtaagctccgtcattggaggaatatgcttaattgcaaagaatg 394
           |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 772 tctgaccataatcataggtaagctctgtcattggaggaatatgcttaattgcaaagaatg 713

                                                                       
Query: 395 cgatgtgtggatatccctcatcaccatggtcatacagaactggttgccaaaa-acattag 453
           | || ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 712 caatatgtggatatccctcatcaccatgatcatacagaactggttgccaaaacacattag 653

                              
Query: 454 gtgagcagctgtggttcat 472
           |||||||||||||||||||
Sbjct: 652 gtgagcagctgtggttcat 634



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                      
Query: 260 tttagccaaaggaacccctgcacttgcgagaccaacataagcaacttttagacctccga 318
           |||||||||||||||| || |||||  | |||||||||||||||||||||||| |||||
Sbjct: 871 tttagccaaaggaacctctacacttcggggaccaacataagcaacttttagacttccga 813
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>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0034P08, complete sequence
          Length = 173088

 Score =  200 bits (101), Expect = 3e-48
 Identities = 132/141 (93%), Gaps = 1/141 (0%)
 Strand = Plus / Plus

                                                                         
Query: 333   gctctgaccataatcatatgtaagctccgtcattggaggaatatgcttaattgcaaagaa 392
             ||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||
Sbjct: 32453 gctctgaccataatcatatgtaagctctgtcatcggaggaatatgcttgattgcaaagaa 32512

                                                                         
Query: 393   tgcgatgtgtggatatccctcatcaccatggtcatacagaactggttgcc-aaaaacatt 451
             |||||| |||||||||||||| |||||||| ||||||| ||||||||||| |||||||||
Sbjct: 32513 tgcgatatgtggatatccctcgtcaccatgatcatacaaaactggttgccaaaaaacatt 32572

                                  
Query: 452   aggtgagcagctgtggttcat 472
              ||||||||||||||||||||
Sbjct: 32573 tggtgagcagctgtggttcat 32593



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                         
Query: 260   tttagccaaaggaacccctgcacttgcgagaccaacataagcaacttttagacctccgac 319
             |||||||||||||||| ||||||||||||||||||||||||||  |||| ||| ||||||
Sbjct: 32359 tttagccaaaggaacctctgcacttgcgagaccaacataagcagtttttggacttccgac 32418

                       
Query: 320   accctgaatt 329
             | || |||||
Sbjct: 32419 atccagaatt 32428
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>gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0007P22, complete sequence
          Length = 148068

 Score =  200 bits (101), Expect = 3e-48
 Identities = 132/141 (93%), Gaps = 1/141 (0%)
 Strand = Plus / Plus

                                                                          
Query: 333    gctctgaccataatcatatgtaagctccgtcattggaggaatatgcttaattgcaaagaa 392
              ||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||
Sbjct: 143971 gctctgaccataatcatatgtaagctctgtcatcggaggaatatgcttgattgcaaagaa 144030

                                                                          
Query: 393    tgcgatgtgtggatatccctcatcaccatggtcatacagaactggttgcc-aaaaacatt 451
              |||||| |||||||||||||| |||||||| ||||||| ||||||||||| |||||||||
Sbjct: 144031 tgcgatatgtggatatccctcgtcaccatgatcatacaaaactggttgccaaaaaacatt 144090

                                   
Query: 452    aggtgagcagctgtggttcat 472
               ||||||||||||||||||||
Sbjct: 144091 tggtgagcagctgtggttcat 144111



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                          
Query: 260    tttagccaaaggaacccctgcacttgcgagaccaacataagcaacttttagacctccgac 319
              |||||||||||||||| ||||||||||||||||||||||||||  |||| ||| ||||||
Sbjct: 143877 tttagccaaaggaacctctgcacttgcgagaccaacataagcagtttttggacttccgac 143936

                        
Query: 320    accctgaatt 329
              | || |||||
Sbjct: 143937 atccagaatt 143946
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  200 bits (101), Expect = 3e-48
 Identities = 132/141 (93%), Gaps = 1/141 (0%)
 Strand = Plus / Minus

                                                                            
Query: 333      gctctgaccataatcatatgtaagctccgtcattggaggaatatgcttaattgcaaagaa 392
                ||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||
Sbjct: 22308845 gctctgaccataatcatatgtaagctctgtcatcggaggaatatgcttgattgcaaagaa 22308786

                                                                            
Query: 393      tgcgatgtgtggatatccctcatcaccatggtcatacagaactggttgcc-aaaaacatt 451
                |||||| |||||||||||||| |||||||| ||||||| ||||||||||| |||||||||
Sbjct: 22308785 tgcgatatgtggatatccctcgtcaccatgatcatacaaaactggttgccaaaaaacatt 22308726

                                     
Query: 452      aggtgagcagctgtggttcat 472
                 ||||||||||||||||||||
Sbjct: 22308725 tggtgagcagctgtggttcat 22308705



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                            
Query: 260      tttagccaaaggaacccctgcacttgcgagaccaacataagcaacttttagacctccgac 319
                |||||||||||||||| ||||||||||||||||||||||||||  |||| ||| ||||||
Sbjct: 22308939 tttagccaaaggaacctctgcacttgcgagaccaacataagcagtttttggacttccgac 22308880

                          
Query: 320      accctgaatt 329
                | || |||||
Sbjct: 22308879 atccagaatt 22308870
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>gb|AF344453.1|AF344453 Oryza sativa SET1 (SET1) mRNA, complete cds
          Length = 2982

 Score =  200 bits (101), Expect = 3e-48
 Identities = 132/141 (93%), Gaps = 1/141 (0%)
 Strand = Plus / Minus

                                                                        
Query: 333  gctctgaccataatcatatgtaagctccgtcattggaggaatatgcttaattgcaaagaa 392
            ||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||
Sbjct: 2421 gctctgaccataatcatatgtaagctctgtcatcggaggaatatgcttgattgcaaagaa 2362

                                                                        
Query: 393  tgcgatgtgtggatatccctcatcaccatggtcatacagaactggttgcc-aaaaacatt 451
            |||||| |||||||||||||| |||||||| ||||||| ||||||||||| |||||||||
Sbjct: 2361 tgcgatatgtggatatccctcgtcaccatgatcatacaaaactggttgccaaaaaacatt 2302

                                 
Query: 452  aggtgagcagctgtggttcat 472
             ||||||||||||||||||||
Sbjct: 2301 tggtgagcagctgtggttcat 2281



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                        
Query: 260  tttagccaaaggaacccctgcacttgcgagaccaacataagcaacttttagacctccgac 319
            |||||||||||||||| ||||||||||||||||||||||||||  |||| ||| ||||||
Sbjct: 2515 tttagccaaaggaacctctgcacttgcgagaccaacataagcagtttttggacttccgac 2456

                      
Query: 320  accctgaatt 329
            | || |||||
Sbjct: 2455 atccagaatt 2446
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>dbj|AK102379.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092A08, full
            insert sequence
          Length = 3270

 Score =  200 bits (101), Expect = 3e-48
 Identities = 132/141 (93%), Gaps = 1/141 (0%)
 Strand = Plus / Minus

                                                                        
Query: 333  gctctgaccataatcatatgtaagctccgtcattggaggaatatgcttaattgcaaagaa 392
            ||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||
Sbjct: 2741 gctctgaccataatcatatgtaagctctgtcatcggaggaatatgcttgattgcaaagaa 2682

                                                                        
Query: 393  tgcgatgtgtggatatccctcatcaccatggtcatacagaactggttgcc-aaaaacatt 451
            |||||| |||||||||||||| |||||||| ||||||| ||||||||||| |||||||||
Sbjct: 2681 tgcgatatgtggatatccctcgtcaccatgatcatacaaaactggttgccaaaaaacatt 2622

                                 
Query: 452  aggtgagcagctgtggttcat 472
             ||||||||||||||||||||
Sbjct: 2621 tggtgagcagctgtggttcat 2601



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                        
Query: 260  tttagccaaaggaacccctgcacttgcgagaccaacataagcaacttttagacctccgac 319
            |||||||||||||||| ||||||||||||||||||||||||||  |||| ||| ||||||
Sbjct: 2835 tttagccaaaggaacctctgcacttgcgagaccaacataagcagtttttggacttccgac 2776

                      
Query: 320  accctgaatt 329
            | || |||||
Sbjct: 2775 atccagaatt 2766
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>dbj|AK059336.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-A12, full
            insert sequence
          Length = 1858

 Score =  200 bits (101), Expect = 3e-48
 Identities = 132/141 (93%), Gaps = 1/141 (0%)
 Strand = Plus / Minus

                                                                        
Query: 333  gctctgaccataatcatatgtaagctccgtcattggaggaatatgcttaattgcaaagaa 392
            ||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||
Sbjct: 1449 gctctgaccataatcatatgtaagctctgtcatcggaggaatatgcttgattgcaaagaa 1390

                                                                        
Query: 393  tgcgatgtgtggatatccctcatcaccatggtcatacagaactggttgcc-aaaaacatt 451
            |||||| |||||||||||||| |||||||| ||||||| ||||||||||| |||||||||
Sbjct: 1389 tgcgatatgtggatatccctcgtcaccatgatcatacaaaactggttgccaaaaaacatt 1330

                                 
Query: 452  aggtgagcagctgtggttcat 472
             ||||||||||||||||||||
Sbjct: 1329 tggtgagcagctgtggttcat 1309
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  200 bits (101), Expect = 3e-48
 Identities = 132/141 (93%), Gaps = 1/141 (0%)
 Strand = Plus / Minus

                                                                            
Query: 333      gctctgaccataatcatatgtaagctccgtcattggaggaatatgcttaattgcaaagaa 392
                ||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||
Sbjct: 22618756 gctctgaccataatcatatgtaagctctgtcatcggaggaatatgcttgattgcaaagaa 22618697

                                                                            
Query: 393      tgcgatgtgtggatatccctcatcaccatggtcatacagaactggttgcc-aaaaacatt 451
                |||||| |||||||||||||| |||||||| ||||||| ||||||||||| |||||||||
Sbjct: 22618696 tgcgatatgtggatatccctcgtcaccatgatcatacaaaactggttgccaaaaaacatt 22618637

                                     
Query: 452      aggtgagcagctgtggttcat 472
                 ||||||||||||||||||||
Sbjct: 22618636 tggtgagcagctgtggttcat 22618616



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 63/70 (90%)
 Strand = Plus / Minus

                                                                            
Query: 260      tttagccaaaggaacccctgcacttgcgagaccaacataagcaacttttagacctccgac 319
                |||||||||||||||| ||||||||||||||||||||||||||  |||| ||| ||||||
Sbjct: 22618850 tttagccaaaggaacctctgcacttgcgagaccaacataagcagtttttggacttccgac 22618791

                          
Query: 320      accctgaatt 329
                | || |||||
Sbjct: 22618790 atccagaatt 22618781
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 117/138 (84%), Gaps = 1/138 (0%)
 Strand = Plus / Minus

                                                                            
Query: 337      tgaccataatcatatgtaagctccgtcattggaggaatatgcttaattgcaaagaatgcg 396
                |||||||||||||| |||||||| ||||| |||||||| | ||| |||||||||||||| 
Sbjct: 11536905 tgaccataatcataagtaagctctgtcatgggaggaatgttcttgattgcaaagaatgca 11536846

                                                                            
Query: 397      atgtgtggatatccctcatcaccatggtcatacagaactggttgcca-aaaacattaggt 455
                || ||||| || |||||||||||||| |||||||  ||||| ||  | ||||||||||| 
Sbjct: 11536845 atatgtgggtagccctcatcaccatgatcatacatcactggctggtagaaaacattagga 11536786

                                  
Query: 456      gagcagctgtggttcatg 473
                ||||| || || ||||||
Sbjct: 11536785 gagcaactatgattcatg 11536768
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>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0042L15, from chromosome 3, complete sequence
          Length = 172475

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 117/138 (84%), Gaps = 1/138 (0%)
 Strand = Plus / Minus

                                                                         
Query: 337   tgaccataatcatatgtaagctccgtcattggaggaatatgcttaattgcaaagaatgcg 396
             |||||||||||||| |||||||| ||||| |||||||| | ||| |||||||||||||| 
Sbjct: 87477 tgaccataatcataagtaagctctgtcatgggaggaatgttcttgattgcaaagaatgca 87418

                                                                         
Query: 397   atgtgtggatatccctcatcaccatggtcatacagaactggttgcca-aaaacattaggt 455
             || ||||| || |||||||||||||| |||||||  ||||| ||  | ||||||||||| 
Sbjct: 87417 atatgtgggtagccctcatcaccatgatcatacatcactggctggtagaaaacattagga 87358

                               
Query: 456   gagcagctgtggttcatg 473
             ||||| || || ||||||
Sbjct: 87357 gagcaactatgattcatg 87340
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 117/138 (84%), Gaps = 1/138 (0%)
 Strand = Plus / Minus

                                                                            
Query: 337      tgaccataatcatatgtaagctccgtcattggaggaatatgcttaattgcaaagaatgcg 396
                |||||||||||||| |||||||| ||||| |||||||| | ||| |||||||||||||| 
Sbjct: 11533668 tgaccataatcataagtaagctctgtcatgggaggaatgttcttgattgcaaagaatgca 11533609

                                                                            
Query: 397      atgtgtggatatccctcatcaccatggtcatacagaactggttgcca-aaaacattaggt 455
                || ||||| || |||||||||||||| |||||||  ||||| ||  | ||||||||||| 
Sbjct: 11533608 atatgtgggtagccctcatcaccatgatcatacatcactggctggtagaaaacattagga 11533549

                                  
Query: 456      gagcagctgtggttcatg 473
                ||||| || || ||||||
Sbjct: 11533548 gagcaactatgattcatg 11533531
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>gb|AY596552.1| Saccharum officinarum clone SCCCRZ2001G10, complete sequence
          Length = 2562

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 111/136 (81%), Gaps = 1/136 (0%)
 Strand = Plus / Plus

                                                                       
Query: 339 accataatcatatgtaagctccgtcattggaggaatatgcttaattgcaaagaatgcgat 398
           |||||| ||||| || || || ||||| || ||||||||||| | |||||||||    ||
Sbjct: 533 accatagtcataagtcagttctgtcatgggtggaatatgcttcagtgcaaagaacattat 592

                                                                       
Query: 399 gtgtggatatccctcatcaccatggtcatacagaactggttgccaaaa-acattaggtga 457
            ||||| | ||| ||||| ||||| |||||  ||||||||||||| || ||||| |||||
Sbjct: 593 atgtgggtgtccatcatctccatgatcatattgaactggttgccagaagacattgggtga 652

                           
Query: 458 gcagctgtggttcatg 473
           ||| ||||||||||||
Sbjct: 653 gcaactgtggttcatg 668
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>gb|AY093419.1| Zea mays SET domain protein 105 (set105) mRNA, complete cds
          Length = 2487

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 41/44 (93%), Gaps = 1/44 (2%)
 Strand = Plus / Minus

                                                        
Query: 431  gaactggttgccaaaa-acattaggtgagcagctgtggttcatg 473
            |||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 1978 gaactggttgccaaaagacattgggtgagcaactgtggttcatg 1935
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>ref|NM_191045.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2211

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 85/104 (81%)
 Strand = Plus / Minus

                                                                        
Query: 340  ccataatcatatgtaagctccgtcattggaggaatatgcttaattgcaaagaatgcgatg 399
            ||||| ||||| || || || ||||| |||||||||||||| | ||| |||||   ||||
Sbjct: 2123 ccatagtcataagtcagttctgtcatgggaggaatatgcttcagtgcgaagaacatgatg 2064

                                                        
Query: 400  tgtggatatccctcatcaccatggtcatacagaactggttgcca 443
            |||||||| || || || ||||||||| |  |||||||||||||
Sbjct: 2063 tgtggataaccatcctctccatggtcaaattgaactggttgcca 2020
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 85/104 (81%)
 Strand = Plus / Minus

                                                                            
Query: 340      ccataatcatatgtaagctccgtcattggaggaatatgcttaattgcaaagaatgcgatg 399
                ||||| ||||| || || || ||||| |||||||||||||| | ||| |||||   ||||
Sbjct: 34476671 ccatagtcataagtcagttctgtcatgggaggaatatgcttcagtgcgaagaacatgatg 34476612

                                                            
Query: 400      tgtggatatccctcatcaccatggtcatacagaactggttgcca 443
                |||||||| || || || ||||||||| |  |||||||||||||
Sbjct: 34476611 tgtggataaccatcctctccatggtcaaattgaactggttgcca 34476568
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>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0468B07
          Length = 169071

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 85/104 (81%)
 Strand = Plus / Minus

                                                                          
Query: 340    ccataatcatatgtaagctccgtcattggaggaatatgcttaattgcaaagaatgcgatg 399
              ||||| ||||| || || || ||||| |||||||||||||| | ||| |||||   ||||
Sbjct: 159015 ccatagtcataagtcagttctgtcatgggaggaatatgcttcagtgcgaagaacatgatg 158956

                                                          
Query: 400    tgtggatatccctcatcaccatggtcatacagaactggttgcca 443
              |||||||| || || || ||||||||| |  |||||||||||||
Sbjct: 158955 tgtggataaccatcctctccatggtcaaattgaactggttgcca 158912
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>dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0425G02
          Length = 155432

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 85/104 (81%)
 Strand = Plus / Minus

                                                                         
Query: 340   ccataatcatatgtaagctccgtcattggaggaatatgcttaattgcaaagaatgcgatg 399
             ||||| ||||| || || || ||||| |||||||||||||| | ||| |||||   ||||
Sbjct: 52390 ccatagtcataagtcagttctgtcatgggaggaatatgcttcagtgcgaagaacatgatg 52331

                                                         
Query: 400   tgtggatatccctcatcaccatggtcatacagaactggttgcca 443
             |||||||| || || || ||||||||| |  |||||||||||||
Sbjct: 52330 tgtggataaccatcctctccatggtcaaattgaactggttgcca 52287
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>dbj|AK065227.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H03, full
            insert sequence
          Length = 2926

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 85/104 (81%)
 Strand = Plus / Minus

                                                                        
Query: 340  ccataatcatatgtaagctccgtcattggaggaatatgcttaattgcaaagaatgcgatg 399
            ||||| ||||| || || || ||||| |||||||||||||| | ||| |||||   ||||
Sbjct: 2426 ccatagtcataagtcagttctgtcatgggaggaatatgcttcagtgcgaagaacatgatg 2367

                                                        
Query: 400  tgtggatatccctcatcaccatggtcatacagaactggttgcca 443
            |||||||| || || || ||||||||| |  |||||||||||||
Sbjct: 2366 tgtggataaccatcctctccatggtcaaattgaactggttgcca 2323
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>gb|AY112212.1| Zea mays CL3507_2 mRNA sequence
          Length = 824

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 41/44 (93%), Gaps = 1/44 (2%)
 Strand = Plus / Plus

                                                       
Query: 431 gaactggttgccaaaa-acattaggtgagcagctgtggttcatg 473
           |||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 571 gaactggttgccaaaagacattgggtgagcaactgtggttcatg 614
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>gb|AY187718.2| Zea mays SET domain protein SDG111 mRNA, complete cds
          Length = 2413

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 109/136 (80%), Gaps = 1/136 (0%)
 Strand = Plus / Minus

                                                                        
Query: 339  accataatcatatgtaagctccgtcattggaggaatatgcttaattgcaaagaatgcgat 398
            |||||| ||||| || || || ||||| || |||||||| || | |||||||||    ||
Sbjct: 1948 accatagtcataagtcagttctgtcatgggtggaatatgtttcagtgcaaagaacattat 1889

                                                                        
Query: 399  gtgtggatatccctcatcaccatggtcatacagaactggttgccaaaa-acattaggtga 457
             ||||| | ||| ||||| ||||| |||||  |||| |||||||| || ||||| |||||
Sbjct: 1888 atgtgggtgtccatcatctccatgatcatattgaacaggttgccagaagacattgggtga 1829

                            
Query: 458  gcagctgtggttcatg 473
            ||| ||||||||||||
Sbjct: 1828 gcaactgtggttcatg 1813
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>gb|BT024023.1| Zea mays clone EL01N0414B01 mRNA sequence
          Length = 1607

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 109/136 (80%), Gaps = 1/136 (0%)
 Strand = Plus / Minus

                                                                        
Query: 339  accataatcatatgtaagctccgtcattggaggaatatgcttaattgcaaagaatgcgat 398
            |||||| ||||| || || || ||||| || |||||||| || | |||||||||    ||
Sbjct: 1159 accatagtcataagtcagttctgtcatgggtggaatatgtttcagtgcaaagaacattat 1100

                                                                        
Query: 399  gtgtggatatccctcatcaccatggtcatacagaactggttgccaaaa-acattaggtga 457
             ||||| | ||| ||||| ||||| |||||  |||| |||||||| || ||||| |||||
Sbjct: 1099 atgtgggtgtccatcatctccatgatcatattgaaccggttgccagaagacattgggtga 1040

                            
Query: 458  gcagctgtggttcatg 473
            ||| ||||||||||||
Sbjct: 1039 gcaactgtggttcatg 1024
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>gb|AY109913.1| Zea mays CL3507_1 mRNA sequence
          Length = 1269

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 109/136 (80%), Gaps = 1/136 (0%)
 Strand = Plus / Plus

                                                                       
Query: 339 accataatcatatgtaagctccgtcattggaggaatatgcttaattgcaaagaatgcgat 398
           |||||| ||||| || || || ||||| || |||||||| || | |||||||||    ||
Sbjct: 462 accatagtcataagtcagttctgtcatgggtggaatatgtttcagtgcaaagaacattat 521

                                                                       
Query: 399 gtgtggatatccctcatcaccatggtcatacagaactggttgccaaaa-acattaggtga 457
            ||||| | ||| ||||| ||||| |||||  |||| |||||||| || ||||| |||||
Sbjct: 522 atgtgggtgtccatcatctccatgatcatattgaacaggttgccagaagacattgggtga 581

                           
Query: 458 gcagctgtggttcatg 473
           ||| ||||||||||||
Sbjct: 582 gcaactgtggttcatg 597
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>emb|CR847981.15| Zebrafish DNA sequence from clone CH211-195H23 in linkage group 15,
              complete sequence
          Length = 197506

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 381    aattgcaaagaatgcgatgtgtg 403
              |||||||||||||||||||||||
Sbjct: 174104 aattgcaaagaatgcgatgtgtg 174126
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>ref|NM_126603.1| Arabidopsis thaliana histone-lysine N-methyltransferase/ zinc ion
           binding AT2G05900 mRNA, complete cds
          Length = 939

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 340 ccataatcatatgtaagctccgtcattggaggaatatgcttaattgcaaa 389
           |||||||||||| | | |||||| | |||||||||||| || ||||||||
Sbjct: 869 ccataatcatatctcaactccgttaatggaggaatatgtttcattgcaaa 820
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>ref|NM_101640.1| Arabidopsis thaliana SUVH7 (SU(VAR)3-9 HOMOLOG 7); histone-lysine
            N-methyltransferase/ zinc ion binding AT1G17770 (SUVH7)
            mRNA, complete cds
          Length = 2082

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 340  ccataatcatatgtaagctccgtcattggaggaatatgcttaattgcaaa 389
            ||||| |||||||| | ||| ||||| |||||||||||||| || |||||
Sbjct: 1979 ccatagtcatatgttaactctgtcatcggaggaatatgcttcatagcaaa 1930
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>ref|NM_128034.2| Arabidopsis thaliana SDG21 (SET DOMAIN GROUP 21) AT2G24740 (SDG21)
            mRNA, complete cds
          Length = 2268

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 340  ccataatcatatgtaagctccgtcattggaggaatatgcttaattgcaaa 389
            ||||| |||||||| | ||| |||||||||||||| ||||| || |||||
Sbjct: 2168 ccatagtcatatgttaactctgtcattggaggaatgtgcttcatcgcaaa 2119
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>gb|AC141107.5| Medicago truncatula clone mth2-34a12, complete sequence
          Length = 142659

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                         
Query: 340   ccataatcatatgtaagctccgtcattggaggaatatgcttaattgcaaagaatgcgatg 399
             ||||||||||| || |||||| |||| ||||| || ||  ||||||||||||| || |||
Sbjct: 43030 ccataatcataagttagctccatcataggagggatgtgtctaattgcaaagaaagcaatg 43089

               
Query: 400   tg 401
             ||
Sbjct: 43090 tg 43091
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>gb|AC007266.5| Arabidopsis thaliana chromosome 2 clone F27A10 map mi238, complete
             sequence
          Length = 66237

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                               
Query: 340   ccataatcatatgtaagctccgtcattggaggaatatgcttaattgcaaa 389
             ||||| |||||||| | ||| |||||||||||||| ||||| || |||||
Sbjct: 26691 ccatagtcatatgttaactctgtcattggaggaatgtgcttcatcgcaaa 26740
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>gb|AC005970.3| Arabidopsis thaliana chromosome 2 clone T6P5 map mi310, complete
             sequence
          Length = 121160

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 340   ccataatcatatgtaagctccgtcattggaggaatatgcttaattgcaaa 389
             |||||||||||| | | |||||| | |||||||||||| || ||||||||
Sbjct: 41751 ccataatcatatctcaactccgttaatggaggaatatgtttcattgcaaa 41702
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>gb|AF344451.1|AF344451 Arabidopsis thaliana SUVH8 (SUVH8) gene, complete cds
          Length = 2268

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 340  ccataatcatatgtaagctccgtcattggaggaatatgcttaattgcaaa 389
            ||||| |||||||| | ||| |||||||||||||| ||||| || |||||
Sbjct: 2168 ccatagtcatatgttaactctgtcattggaggaatgtgcttcatcgcaaa 2119
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>gb|AF344450.1|AF344450 Arabidopsis thaliana SUVH7 (SUVH7) mRNA, complete cds
          Length = 2082

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 340  ccataatcatatgtaagctccgtcattggaggaatatgcttaattgcaaa 389
            ||||| |||||||| | ||| ||||| |||||||||||||| || |||||
Sbjct: 1979 ccatagtcatatgttaactctgtcatcggaggaatatgcttcatagcaaa 1930
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>gb|AC034106.4|F2H15 Sequence of BAC F2H15 from Arabidopsis thaliana chromosome 1,
            complete sequence
          Length = 75133

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 340  ccataatcatatgtaagctccgtcattggaggaatatgcttaattgcaaa 389
            ||||| |||||||| | ||| ||||| |||||||||||||| || |||||
Sbjct: 3730 ccatagtcatatgttaactctgtcatcggaggaatatgcttcatagcaaa 3681
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>gb|AC073618.48| Homo sapiens 12 BAC RP11-313E9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 92909

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 149   agaaagaggcagcaaagttat 169
             |||||||||||||||||||||
Sbjct: 59901 agaaagaggcagcaaagttat 59881
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>gb|AC170189.2| Mus musculus BAC clone RP23-103L12 from chromosome 3, complete sequence
          Length = 204731

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   gattatttagccaaaggaac 274
             ||||||||||||||||||||
Sbjct: 46135 gattatttagccaaaggaac 46154
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>ref|NM_196119.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OJ1208D02.14), mRNA
          Length = 726

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 408 tccctcatcaccatggtcat 427
           ||||||||||||||||||||
Sbjct: 329 tccctcatcaccatggtcat 348
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>gb|BT012756.1| Lycopersicon esculentum clone 113700R, mRNA sequence
          Length = 1165

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                           
Query: 187 caccacacccataat-gccgccgccaccataa 217
           ||||| ||||||||| ||||||||||||||||
Sbjct: 529 caccagacccataattgccgccgccaccataa 498
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>gb|AC123947.5| Mus musculus BAC clone RP23-103O6 from chromosome 8, complete sequence
          Length = 187773

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 396   gatgtgtggatatccctcat 415
             ||||||||||||||||||||
Sbjct: 46446 gatgtgtggatatccctcat 46427



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 396   gatgtgtggatatccctcat 415
             ||||||||||||||||||||
Sbjct: 46363 gatgtgtggatatccctcat 46344
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>gb|AC161381.2| Mus musculus BAC clone RP23-166L22 from chromosome 8, complete sequence
          Length = 233354

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   gatgtgtggatatccctcat 415
             ||||||||||||||||||||
Sbjct: 11264 gatgtgtggatatccctcat 11283



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   gatgtgtggatatccctcat 415
             ||||||||||||||||||||
Sbjct: 11181 gatgtgtggatatccctcat 11200
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>gb|AC122934.2| Mus musculus BAC clone RP23-19A13 from 3, complete sequence
          Length = 189627

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 255    gattatttagccaaaggaac 274
              ||||||||||||||||||||
Sbjct: 153607 gattatttagccaaaggaac 153626
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>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 251     ggttgattatttagccaaag 270
               ||||||||||||||||||||
Sbjct: 1242833 ggttgattatttagccaaag 1242852
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>gb|AC134516.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1208D02,
             complete sequence
          Length = 131922

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 408   tccctcatcaccatggtcat 427
             ||||||||||||||||||||
Sbjct: 35512 tccctcatcaccatggtcat 35493
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>gb|AC107314.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone
             OJ1208D02 from chromosome 10, complete sequence
          Length = 120132

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 408   tccctcatcaccatggtcat 427
             ||||||||||||||||||||
Sbjct: 95644 tccctcatcaccatggtcat 95625
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 408      tccctcatcaccatggtcat 427
                ||||||||||||||||||||
Sbjct: 11227524 tccctcatcaccatggtcat 11227505
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>emb|BX932790.1| Gallus gallus finished cDNA, clone ChEST276e2
          Length = 1125

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 60   actacaactaacaacaccacagaa 83
            |||||||||||||| |||||||||
Sbjct: 1041 actacaactaacaagaccacagaa 1018
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>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 239     gtatcccttaagggttgattattt 262
               |||||||||||||||||| |||||
Sbjct: 3583495 gtatcccttaagggttgagtattt 3583472
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>emb|CR548642.6| Zebrafish DNA sequence from clone DKEYP-99B3 in linkage group 4,
            complete sequence
          Length = 6836

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 442  caaaaacattaggtgagcag 461
            ||||||||||||||||||||
Sbjct: 4179 caaaaacattaggtgagcag 4160
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>emb|BX510372.6| Zebrafish DNA sequence from clone CH211-243J20 in linkage group 20,
              complete sequence
          Length = 134837

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 442    caaaaacattaggtgagcag 461
              ||||||||||||||||||||
Sbjct: 114333 caaaaacattaggtgagcag 114314
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 408      tccctcatcaccatggtcat 427
                ||||||||||||||||||||
Sbjct: 11233964 tccctcatcaccatggtcat 11233945


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,022,683
Number of Sequences: 3902068
Number of extensions: 4022683
Number of successful extensions: 65158
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 64898
Number of HSP's gapped (non-prelim): 255
length of query: 473
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 451
effective length of database: 17,147,199,772
effective search space: 7733387097172
effective search space used: 7733387097172
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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