>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score =  111 bits (56), Expect = 2e-21
 Identities = 116/136 (85%)
 Strand = Plus / Minus

                                                                           
Query: 192     actttcaccttcttgctgttggctttatcaactttctcgctttcaaccttcatctttttt 251
               |||||||||||||||||||| ||||| ||||| |||||  |||| ||||||||||| || 
Sbjct: 3070723 actttcaccttcttgctgttagctttgtcaaccttctcattttcgaccttcatcttcttg 3070664

                                                                           
Query: 252     atggaatccaaaagcgatgatgactgttctttgttggatgaagattttgcaaatgggtta 311
               |||||||| ||||| ||||||| |||||||||| | ||||| ||||| || || ||||||
Sbjct: 3070663 atggaatcaaaaagggatgatggctgttctttgcttgatgaggatttcgcgaaggggtta 3070604

                               
Query: 312     agtgaccgttgaggct 327
               | || ||| |||||||
Sbjct: 3070603 actggccgctgaggct 3070588

>dbj|AP005560.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1178_D01
          Length = 121768

 Score =  111 bits (56), Expect = 2e-21
 Identities = 116/136 (85%)
 Strand = Plus / Minus

                                                                         
Query: 192   actttcaccttcttgctgttggctttatcaactttctcgctttcaaccttcatctttttt 251
             |||||||||||||||||||| ||||| ||||| |||||  |||| ||||||||||| || 
Sbjct: 90689 actttcaccttcttgctgttagctttgtcaaccttctcattttcgaccttcatcttcttg 90630

                                                                         
Query: 252   atggaatccaaaagcgatgatgactgttctttgttggatgaagattttgcaaatgggtta 311
             |||||||| ||||| ||||||| |||||||||| | ||||| ||||| || || ||||||
Sbjct: 90629 atggaatcaaaaagggatgatggctgttctttgcttgatgaggatttcgcgaaggggtta 90570

                             
Query: 312   agtgaccgttgaggct 327
             | || ||| |||||||
Sbjct: 90569 actggccgctgaggct 90554

>dbj|AK109602.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-E09, full
            insert sequence
          Length = 2854

 Score =  111 bits (56), Expect = 2e-21
 Identities = 116/136 (85%)
 Strand = Plus / Minus

                                                                        
Query: 192  actttcaccttcttgctgttggctttatcaactttctcgctttcaaccttcatctttttt 251
            |||||||||||||||||||| ||||| ||||| |||||  |||| ||||||||||| || 
Sbjct: 2634 actttcaccttcttgctgttagctttgtcaaccttctcattttcgaccttcatcttcttg 2575

                                                                        
Query: 252  atggaatccaaaagcgatgatgactgttctttgttggatgaagattttgcaaatgggtta 311
            |||||||| ||||| ||||||| |||||||||| | ||||| ||||| || || ||||||
Sbjct: 2574 atggaatcaaaaagggatgatggctgttctttgcttgatgaggatttcgcgaaggggtta 2515

                            
Query: 312  agtgaccgttgaggct 327
            | || ||| |||||||
Sbjct: 2514 actggccgctgaggct 2499

>gb|AC016925.15|AC016925 Homo sapiens X BAC RP11-434J4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 133615

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 283    tgttggatgaagattttgcaaat 305
              |||||||||||||||||||||||
Sbjct: 125800 tgttggatgaagattttgcaaat 125822

>gb|AC117834.6| Homo sapiens chromosome 8, clone CTD-3239E11, complete sequence
          Length = 189536

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 280    ctttgttggatgaagattttgcaaat 305
              |||||||||||||| |||||||||||
Sbjct: 159659 ctttgttggatgaatattttgcaaat 159684

>emb|AL078593.9|HSDJ210B1 Human DNA sequence from clone RP1-210B1 on chromosome 6q23.3-25.1
             Contains part of the gene for a novel protein (contains
             KIAA0680), complete sequence
          Length = 132433

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 277   gttctttgttggatgaagattttgcaaat 305
             |||| |||||||||||| |||||||||||
Sbjct: 43388 gttcattgttggatgaatattttgcaaat 43360

>gb|AC108924.5| Homo sapiens chromosome 8, clone RP11-1113C19, complete sequence
          Length = 125488

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 87    aattttaagtggaaaggaaaa 107
             |||||||||||||||||||||
Sbjct: 94417 aattttaagtggaaaggaaaa 94437

>gb|AC116154.2| Homo sapiens chromosome 8, clone RP11-927P11, complete sequence
          Length = 196518

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 87   aattttaagtggaaaggaaaa 107
            |||||||||||||||||||||
Sbjct: 3937 aattttaagtggaaaggaaaa 3957

>gb|AC093788.3| Homo sapiens BAC clone RP11-218F10 from 4, complete sequence
          Length = 160853

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 72    caactacactaccagaattttaagtggaa 100
             ||||| ||||||||||| |||||||||||
Sbjct: 46634 caactccactaccagaactttaagtggaa 46606

>gb|AC104069.3| Homo sapiens BAC clone RP11-279B11 from 2, complete sequence
          Length = 155106

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 280   ctttgttggatgaagattttgcaaa 304
             |||||||||||||| ||||||||||
Sbjct: 42807 ctttgttggatgaatattttgcaaa 42831

>dbj|AP001804.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-164A10, complete
             sequence
          Length = 166302

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 277   gttctttgttggatgaagattttgcaaat 305
             ||||||||||||||||| | |||||||||
Sbjct: 46821 gttctttgttggatgaatagtttgcaaat 46793

>dbj|AP002965.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-299I2, complete
              sequence
          Length = 150481

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 277    gttctttgttggatgaagattttgcaaat 305
              ||||||||||||||||| | |||||||||
Sbjct: 134020 gttctttgttggatgaatagtttgcaaat 133992

>gb|AC002556.1|AC002556 Human Chromosome 11q25 PAC clone pDJ9j14, complete sequence
          Length = 123189

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 277   gttctttgttggatgaagattttgcaaat 305
             ||||||||||||||||| | |||||||||
Sbjct: 40053 gttctttgttggatgaatagtttgcaaat 40025

>emb|AL606930.13| Mouse DNA sequence from clone RP23-131D5 on chromosome 4, complete
             sequence
          Length = 133741

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 148   ccaccctgcaggttcaggtcc 168
             |||||||||||||||||||||
Sbjct: 88443 ccaccctgcaggttcaggtcc 88463

>dbj|AP004287.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1471H7
          Length = 172543

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 87    aattttaagtggaaaggaaaa 107
             |||||||||||||||||||||
Sbjct: 99047 aattttaagtggaaaggaaaa 99067

>gb|AY591682.1| Mus musculus clone IgK8-27 immunoglobulin kappa-like gene, partial
            sequence
          Length = 2901

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 170  aatgacaagaaaaaacaatt 189
            ||||||||||||||||||||
Sbjct: 2792 aatgacaagaaaaaacaatt 2773

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 88      attttaagtggaaaggaaaa 107
               ||||||||||||||||||||
Sbjct: 7037567 attttaagtggaaaggaaaa 7037586

>gb|AC159715.5| Mus musculus 6 BAC RP23-367A13 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 209869

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    aatgacaagaaaaaacaatt 189
              ||||||||||||||||||||
Sbjct: 190288 aatgacaagaaaaaacaatt 190307

>gb|AC006372.2| Homo sapiens BAC clone RP11-331D5 from 7, complete sequence
          Length = 190846

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 282    ttgttggatgaagattttgcaaat 305
              |||||||||||||| |||||||||
Sbjct: 136908 ttgttggatgaagagtttgcaaat 136885

>emb|AL513318.8| Human DNA sequence from clone RP11-276H19 on chromosome 9 Contains the 3'
              end of a novel gene, a novel pseudogene, CDC20 pseudogene,
              and a nuclear transcription factor Y, gamma (HSM, CBFC,
              HAP5) (NFYC) pseudogene, complete sequence
          Length = 153292

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 282    ttgttggatgaagattttgcaaat 305
              |||||||||||| |||||||||||
Sbjct: 150179 ttgttggatgaatattttgcaaat 150156

>emb|AL354982.12| Human DNA sequence from clone RP11-473H13 on chromosome 9 Contains part
              of the gene for the likely ortholog of mouse polydom
              (POLYDOM), complete sequence
          Length = 119077

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 81     taccagaattttaagtggaa 100
              ||||||||||||||||||||
Sbjct: 110571 taccagaattttaagtggaa 110552

>emb|AL157933.19| Human DNA sequence from clone RP11-395L12 on chromosome Xq21.1-21.33,
             complete sequence
          Length = 48768

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 87    aattttaagtggaaaggaaaagca 110
             |||||||||||||||| |||||||
Sbjct: 15014 aattttaagtggaaagaaaaagca 14991

>gb|AC155332.10| Mus musculus 6 BAC RP24-140J8 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 202181

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    aatgacaagaaaaaacaatt 189
              ||||||||||||||||||||
Sbjct: 107295 aatgacaagaaaaaacaatt 107314

>emb|BX323543.11| Zebrafish DNA sequence from clone DKEYP-67E1 in linkage group 25,
              complete sequence
          Length = 181520

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    caggtccaaatgacaagaaa 181
              ||||||||||||||||||||
Sbjct: 141185 caggtccaaatgacaagaaa 141166

>gb|AC103891.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1175C11,
             complete sequence
          Length = 123620

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    attttaagtggaaaggaaaa 107
             ||||||||||||||||||||
Sbjct: 44798 attttaagtggaaaggaaaa 44779

>gb|AC109998.2| Homo sapiens chromosome 5 clone CTD-2203A3, complete sequence
          Length = 126394

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  caaatgacaagaaaaaacaa 187
            ||||||||||||||||||||
Sbjct: 1024 caaatgacaagaaaaaacaa 1005

>dbj|AK149124.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN
            full-length enriched library, clone:7120485K02
            product:hypothetical Kringle containing protein, full
            insert sequence
          Length = 1664

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 348  ctgctcttatttttagcacc 367
            ||||||||||||||||||||
Sbjct: 992  ctgctcttatttttagcacc 1011

>gb|AC091903.2| Homo sapiens chromosome 5 clone RP11-182I21, complete sequence
          Length = 194860

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   caaatgacaagaaaaaacaa 187
             ||||||||||||||||||||
Sbjct: 53535 caaatgacaagaaaaaacaa 53554

>gb|AC158672.6| Mus musculus 6 BAC RP23-64J23 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 216954

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 170  aatgacaagaaaaaacaatt 189
            ||||||||||||||||||||
Sbjct: 1310 aatgacaagaaaaaacaatt 1329

>emb|BX284697.8| Zebrafish DNA sequence from clone DKEY-7M11 in linkage group 1,
             complete sequence
          Length = 209946

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   aaatgacaagaaaaaacaat 188
             ||||||||||||||||||||
Sbjct: 70661 aaatgacaagaaaaaacaat 70680

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 88      attttaagtggaaaggaaaa 107
               ||||||||||||||||||||
Sbjct: 7035462 attttaagtggaaaggaaaa 7035481

>gb|AC016725.5| Homo sapiens BAC clone RP11-341H1 from 2, complete sequence
          Length = 164180

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 282    ttgttggatgaagattttgcaaat 305
              |||||||||||| |||||||||||
Sbjct: 131687 ttgttggatgaacattttgcaaat 131710

>gb|AC008443.10| Homo sapiens chromosome 5 clone CTC-338M12, complete sequence
          Length = 120515

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 290  tgaagattttgcaaatgggt 309
            ||||||||||||||||||||
Sbjct: 9974 tgaagattttgcaaatgggt 9955

>gb|AC084063.5| Homo sapiens chromosome 16 clone RP11-255J12, complete sequence
          Length = 46053

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 277   gttctttgttggatgaagattttgcaaa 304
             |||| |||||||||||| ||||||||||
Sbjct: 19896 gttccttgttggatgaatattttgcaaa 19869

>emb|AL132668.4|CNS01DT9 Human chromosome 14 DNA sequence BAC R-550M19 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 175725

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 171    atgacaagaaaaaacaatta 190
              ||||||||||||||||||||
Sbjct: 137047 atgacaagaaaaaacaatta 137066

>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome
          Length = 1767403

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 177    agaaaaaacaattatacttt 196
              ||||||||||||||||||||
Sbjct: 767198 agaaaaaacaattatacttt 767217

>gb|AC111089.27| Mus musculus chromosome 5, clone RP23-156F20, complete sequence
          Length = 211658

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    taccagaattttaagtggaa 100
             ||||||||||||||||||||
Sbjct: 86438 taccagaattttaagtggaa 86457

>gb|AC134598.3| Mus musculus BAC clone RP23-175C23 from 8, complete sequence
          Length = 205622

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 348   ctgctcttatttttagcacc 367
             ||||||||||||||||||||
Sbjct: 82554 ctgctcttatttttagcacc 82535


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,305,910
Number of Sequences: 3902068
Number of extensions: 5305910
Number of successful extensions: 120611
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 120415
Number of HSP's gapped (non-prelim): 196
length of query: 441
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 419
effective length of database: 17,147,199,772
effective search space: 7184676704468
effective search space used: 7184676704468
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)