ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl41g03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BTKL_DROME (P08630) Tyrosine-protein kinase Btk29A (EC 2.7.10.2)... 29 5.1
2UBP3_SCHPO (O94269) Probable ubiquitin carboxyl-terminal hydrola... 28 8.7

>BTKL_DROME (P08630) Tyrosine-protein kinase Btk29A (EC 2.7.10.2) (Dsrc28C)|
          Length = 786

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 313 VLEMPKN*QSEVHDISCLPWQYCPSHQPKIR 405
           +LE PK+   E++D+  L W + P  +P  R
Sbjct: 741 ILEKPKSCAKEIYDVMKLCWSHGPEERPAFR 771



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>UBP3_SCHPO (O94269) Probable ubiquitin carboxyl-terminal hydrolase 3 (EC|
           3.1.2.15) (Ubiquitin thioesterase 3) (Ubiquitin-specific
           processing protease 3) (Deubiquitinating enzyme 3)
          Length = 512

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +1

Query: 358 SCLPWQYCPSHQPKIRWHNRTKTPTNVDLLSSVQ 459
           S LPW  C  H+   R   + ++P N+D   SVQ
Sbjct: 26  SLLPWYSCSEHEFPHRKARKRRSPKNLDWSVSVQ 59


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,978,038
Number of Sequences: 219361
Number of extensions: 1275818
Number of successful extensions: 2589
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2588
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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