>gb|AC131129.4| Rattus norvegicus 17 BAC CH230-15O20 (Children's Hospital Oakland
            Research Institute) complete sequence
          Length = 232401

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 104  gacaacaccgacatgtgacacgca 127
            |||||||||||| |||||||||||
Sbjct: 1714 gacaacaccgacctgtgacacgca 1691

>dbj|AB118237.1| Rattus norvegicus rGGPS1 gene for geranylgeranyl diphosphate
            synthase1, complete cds, alternative splicing
          Length = 13601

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 104  gacaacaccgacatgtgacacgca 127
            |||||||||||| |||||||||||
Sbjct: 5463 gacaacaccgacctgtgacacgca 5486

>gb|AY107024.1| Zea mays PCO127729 mRNA sequence
          Length = 576

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 121 acacgcaacacgttaaaacgctct 144
           |||||||||| |||||||||||||
Sbjct: 445 acacgcaacatgttaaaacgctct 422

>gb|AC005601.1| Homo sapiens chromosome 5, BAC clone 343g16 (LBNL H180), complete
            sequence
          Length = 38413

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 11   aaaaagcacctgttaggta 29
            |||||||||||||||||||
Sbjct: 7302 aaaaagcacctgttaggta 7320

>gb|AY436590.1| Homo sapiens nuclear receptor subfamily 3, group C, member 1
             (glucocorticoid receptor) (NR3C1) gene, complete cds
          Length = 127687

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 11    aaaaagcacctgttaggta 29
             |||||||||||||||||||
Sbjct: 99543 aaaaagcacctgttaggta 99525

>gb|AC102626.9| Mus musculus chromosome 12, clone RP23-456E21, complete sequence
          Length = 222905

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 48    ttacaagactgttctgctc 66
             |||||||||||||||||||
Sbjct: 46212 ttacaagactgttctgctc 46230

>gb|AC117623.7| Mus musculus chromosome 1, clone RP23-114L12, complete sequence
          Length = 211821

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 1     ggaaatcagaaaaaagcac 19
             |||||||||||||||||||
Sbjct: 66960 ggaaatcagaaaaaagcac 66978

>gb|AC091925.3| Homo sapiens chromosome 5 clone RP11-278J6, complete sequence
          Length = 164668

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 11    aaaaagcacctgttaggta 29
             |||||||||||||||||||
Sbjct: 23542 aaaaagcacctgttaggta 23560

>gb|AC012634.8| Homo sapiens chromosome 5 clone CTD-2185H17, complete sequence
          Length = 237712

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 11    aaaaagcacctgttaggta 29
             |||||||||||||||||||
Sbjct: 77384 aaaaagcacctgttaggta 77366

>dbj|BS000041.1| Pan troglodytes chromosome 22 clone:PTB-022L23, map 22, complete
              sequences
          Length = 190432

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 16     gcacctgttaggtaaacta 34
              |||||||||||||||||||
Sbjct: 145706 gcacctgttaggtaaacta 145688

>gb|AC157472.3| Medicago truncatula chromosome 7 BAC clone mth2-41h16, complete
             sequence
          Length = 114287

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 39    tccaaggagttacaagact 57
             |||||||||||||||||||
Sbjct: 42847 tccaaggagttacaagact 42865

>gb|AC113329.7| Mus musculus chromosome 16, clone RP23-460L9, complete sequence
          Length = 176766

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 3     aaatcagaaaaaagcacct 21
             |||||||||||||||||||
Sbjct: 18117 aaatcagaaaaaagcacct 18099

>emb|CT025710.9| Mouse DNA sequence from clone RP23-261P14 on chromosome 12, complete
              sequence
          Length = 225685

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 48     ttacaagactgttctgctc 66
              |||||||||||||||||||
Sbjct: 155300 ttacaagactgttctgctc 155318

>gb|AC174769.1| Gasterosteus aculeatus clone VMRC28-49K14, complete sequence
          Length = 135249

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 42    aaggagttacaagactgtt 60
             |||||||||||||||||||
Sbjct: 23873 aaggagttacaagactgtt 23855

>emb|AL163217.2|HS21C017 Homo sapiens chromosome 21 segment HS21C017
          Length = 340000

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 16     gcacctgttaggtaaacta 34
              |||||||||||||||||||
Sbjct: 156814 gcacctgttaggtaaacta 156796

>dbj|AP004954.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT21G09, TM0131,
             complete sequence
          Length = 93645

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 3     aaatcagaaaaaagcacct 21
             |||||||||||||||||||
Sbjct: 30176 aaatcagaaaaaagcacct 30158

>dbj|AP000656.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:21B1905,
             LL56-APP region, complete sequence
          Length = 23317

 Score = 38.2 bits (19), Expect = 7.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 16    gcacctgttaggtaaacta 34
             |||||||||||||||||||
Sbjct: 20249 gcacctgttaggtaaacta 20231


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,456,233
Number of Sequences: 3902068
Number of extensions: 1456233
Number of successful extensions: 88589
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88556
Number of HSP's gapped (non-prelim): 33
length of query: 146
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 125
effective length of database: 17,151,101,840
effective search space: 2143887730000
effective search space used: 2143887730000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)