ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl41f08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MOT5_HUMAN (O15374) Monocarboxylate transporter 5 (MCT 5) (MCT 4) 28 9.2

>MOT5_HUMAN (O15374) Monocarboxylate transporter 5 (MCT 5) (MCT 4)|
          Length = 487

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
 Frame = +3

Query: 3   STATNC*HSIQSFV*DAERKR--VPGAHHKVQQLQSEEQYSGPS 128
           +T T+C  + +S + D+  ++  +P  +  V Q QSEE Y+GP+
Sbjct: 224 ATETHCHETEESTIKDSTTQKAGLPSKNLTVSQNQSEEFYNGPN 267


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,869,285
Number of Sequences: 219361
Number of extensions: 141631
Number of successful extensions: 378
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 378
length of database: 80,573,946
effective HSP length: 20
effective length of database: 76,186,726
effective search space used: 1828481424
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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