>emb|AL358133.11| Human DNA sequence from clone RP11-810I22 on chromosome 6 Contains the
             3' end of a novel gene (CD001, BM-021, FLJ11240), complete
             sequence
          Length = 91859

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 279   agctaaattttacaggctgctt 300
             ||||||||||||||||||||||
Sbjct: 29739 agctaaattttacaggctgctt 29760

>gb|AC021019.5|AC021019 Homo sapiens BAC clone RP11-496J3 from 6, complete sequence
          Length = 220216

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 279   agctaaattttacaggctgctt 300
             ||||||||||||||||||||||
Sbjct: 42744 agctaaattttacaggctgctt 42765

>gb|AC120411.9| Mus musculus chromosome 6, clone RP24-447O2, complete sequence
          Length = 202938

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 226    aaagagggaaaagaaactaga 246
              |||||||||||||||||||||
Sbjct: 137742 aaagagggaaaagaaactaga 137762

>gb|AC108919.7| Mus musculus chromosome 6, clone RP23-52O21, complete sequence
          Length = 141653

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 226   aaagagggaaaagaaactaga 246
             |||||||||||||||||||||
Sbjct: 22178 aaagagggaaaagaaactaga 22198

>emb|AL031684.14|HS917N8 Human DNA sequence from clone RP5-917N8 on chromosome 20p11.22-12.1
             Contains STSs and GSSs, complete sequence
          Length = 143712

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 279   agctaaattttacaggctgct 299
             |||||||||||||||||||||
Sbjct: 99605 agctaaattttacaggctgct 99625

>emb|AL161584.2|ATCHRIV80 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 80
          Length = 192861

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 265    aaagaaaacaagagagctaaa 285
              |||||||||||||||||||||
Sbjct: 115622 aaagaaaacaagagagctaaa 115642

>emb|AL031032.1|ATF17I5 Arabidopsis thaliana DNA chromosome 4, BAC clone  F17I5 (ESSA project)
          Length = 86748

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 265   aaagaaaacaagagagctaaa 285
             |||||||||||||||||||||
Sbjct: 66598 aaagaaaacaagagagctaaa 66618

>gb|AC136188.2| Homo sapiens 12 BAC RP11-633L8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 70901

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 279   agctaaattttacaggctgct 299
             |||||||||||||||||||||
Sbjct: 28083 agctaaattttacaggctgct 28063

>dbj|AP000783.4| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-12D18, complete
              sequence
          Length = 114233

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 279    agctaaattttacaggctgct 299
              |||||||||||||||||||||
Sbjct: 102383 agctaaattttacaggctgct 102403

>gb|AC120865.7| Mus musculus chromosome 5, clone RP23-88L6, complete sequence
          Length = 235287

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   aaatacaacccacagccatc 155
             ||||||||||||||||||||
Sbjct: 31574 aaatacaacccacagccatc 31555

>gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome
          Length = 920079

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 43     gacattattgccagattttt 62
              ||||||||||||||||||||
Sbjct: 677146 gacattattgccagattttt 677165

>gb|AE017243.1| Mycoplasma hyopneumoniae J, complete genome
          Length = 897405

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 43     gacattattgccagattttt 62
              ||||||||||||||||||||
Sbjct: 653932 gacattattgccagattttt 653951

>gb|AC140352.3| Mus musculus BAC clone RP23-223L7 from chromosome 18, complete sequence
          Length = 165504

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 265   aaagaaaacaagagagctaa 284
             ||||||||||||||||||||
Sbjct: 52169 aaagaaaacaagagagctaa 52188

>gb|AC124956.29| Medicago truncatula clone mth2-14k24, complete sequence
          Length = 123871

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 352    taccattgggcatcatcacg 371
              ||||||||||||||||||||
Sbjct: 117521 taccattgggcatcatcacg 117540

>emb|AL512283.12| Human DNA sequence from clone RP11-95G17 on chromosome 6 Contains the
              PKIB gene for protein kinase (cAMP-dependent, catalytic)
              inhibitor beta (protein kinase, cAMP-dependent, catalytic,
              inhibitor 2 (PRKACN2)) (similar to FLJ23817). Contains a
              CpG island, complete sequence
          Length = 153677

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 214    atctgtaagctaaaagaggg 233
              ||||||||||||||||||||
Sbjct: 116787 atctgtaagctaaaagaggg 116768

>gb|AC010872.8| Homo sapiens BAC clone RP11-83B6 from 2, complete sequence
          Length = 189507

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 134    gaaaatacaacccacagcca 153
              ||||||||||||||||||||
Sbjct: 106102 gaaaatacaacccacagcca 106083

>gb|AE017332.1| Mycoplasma hyopneumoniae 232, complete genome
          Length = 892758

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 43     gacattattgccagattttt 62
              ||||||||||||||||||||
Sbjct: 640015 gacattattgccagattttt 640034


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,590,560
Number of Sequences: 3902068
Number of extensions: 3590560
Number of successful extensions: 67456
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67418
Number of HSP's gapped (non-prelim): 38
length of query: 373
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 351
effective length of database: 17,147,199,772
effective search space: 6018667119972
effective search space used: 6018667119972
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)