>HIPK3_HUMAN (Q9H422) Homeodomain-interacting protein kinase 3 (EC 2.7.11.1)|
            (Homolog of protein kinase YAK1) (Fas-interacting
            serine/threonine-protein kinase) (FIST) (Androgen
            receptor-interacting nuclear protein kinase) (ANPK)
          Length = 1215

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
 Frame = +2

Query: 146  CSIVIRPWESQHGMQVDGHQANTFGF--PLVSKRNHT-RSNSPRLELTLQKLLSVA 304
            CS+V+ P E ++G+  D H ANT     PL+  R+   R N P    T Q+ L+ A
Sbjct: 992  CSVVVPPVELENGLNADEHMANTDSICQPLIKGRSAPGRLNQPSAVGTRQQKLTSA 1047

>NETA_DROME (Q24567) Netrin-A precursor|
          Length = 726

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
 Frame = +3

Query: 231 CP-KETILGVTPHV*S*RCKNYYQL---HILPCPEQPPRTVSICSSRTT 365
           CP K+ + G+T +    RC   YQ    HI PC +QPPR +++  ++ T
Sbjct: 451 CPCKDGVTGLTCN----RCARGYQQSRSHIAPCIKQPPRMINMLDTQNT 495

>E434_ADE02 (P03239) Early E4 34 kDa protein|
          Length = 294

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = -1

Query: 186 IPCWDSHGRITMLHPRPL-PACLGIQIDACMHLRGLLCSPGF*NVFKHISKCHKILTKK 13
           +P +++  R T+L   PL P C  + +    ++RGL CS GF  + + +     +LT++
Sbjct: 30  LPPFETETRATILEDHPLLPECNTLTMHNVSYVRGLPCSVGFTLIQEWVVPWDMVLTRE 88

>ESR1_MOUSE (P19785) Estrogen receptor (ER) (Estradiol receptor) (ER-alpha)|
          Length = 599

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +2

Query: 173 SQHGMQVDGHQANTFGFPLVSKRNHTRSNSPRLELTLQKLLS 298
           ++ G   D   AN +  PLV K  HT+ NSP L LT  +++S
Sbjct: 282 NEMGASGDMRAANLWPSPLVIK--HTKKNSPALSLTADQMVS 321

>ESR1_RAT (P06211) Estrogen receptor (ER) (Estradiol receptor) (ER-alpha)|
          Length = 600

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +2

Query: 173 SQHGMQVDGHQANTFGFPLVSKRNHTRSNSPRLELTLQKLLS 298
           ++ G   D   AN +  PLV K  HT+ NSP L LT  +++S
Sbjct: 283 NEMGTSGDMRAANLWPSPLVIK--HTKKNSPALSLTADQMVS 322

>VGLC_EHV4 (P22596) Glycoprotein C precursor (Glycoprotein 13)|
          Length = 485

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
 Frame = +2

Query: 68  PGEHNNPLRCMHASI*IPKQAGRGRGCSIVIRPWESQHGMQVDGHQANTFG-FPLVSKRN 244
           P  H N + C ++ I +P        CS  +    S++ +++  +Q   F   P   + N
Sbjct: 83  PHSHENTITCTNSLISVPYYTSVTINCSTTVSVNHSEYRLEIHLNQRTPFSDTPPGDQEN 142

Query: 245 HTRSNSPRLELTLQKLLSVAHS 310
           +   N+ + +  L  L S AHS
Sbjct: 143 YVNHNATKDQTLL--LFSTAHS 162

>PDXJ_EHRCJ (Q3YSI5) Pyridoxal phosphate biosynthetic protein pdxJ (PNP|
           synthase)
          Length = 238

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -3

Query: 256 TPSMVSFGHQRKPKCVCLVP 197
           T  M+S   + KPKCVCLVP
Sbjct: 76  TDEMLSIAIEVKPKCVCLVP 95

>CATL_SCHMA (Q26534) Cathepsin L precursor (EC 3.4.22.15) (SMCL1)|
          Length = 319

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -2

Query: 233 TPTETQMCLLGAHQLAFRVGIPTVELRCYIHGLCLPAWVF 114
           T  ET++     H     VG+  + L+ Y HG+  P W+F
Sbjct: 218 TQDETELAAWLYHNSTISVGMNALLLQFYQHGISHPWWIF 257

>ECM2_HUMAN (O94769) Extracellular matrix protein 2 precursor (Matrix|
           glycoprotein SC1/ECM2)
          Length = 699

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
 Frame = -1

Query: 216 NVFAWCPSTCIPCWDSHGRI----TMLHPRPLPACLGIQIDAC 100
           N   W P  C  C  S GR+    TM HP+  P  +  + + C
Sbjct: 112 NKAVWSPEPCTTCLCSDGRVLCDETMCHPQRCPQTVIPEGECC 154

>KU70_YEAST (P32807) ATP-dependent DNA helicase 2 subunit 1 (EC 3.6.1.-) (Yeast|
           Ku70 protein) (High affinity DNA-binding factor subunit
           1)
          Length = 602

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 12/50 (24%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
 Frame = -1

Query: 327 VVPDK----GECATDSSFCSVSSRRGELLLVWFLLDTNGNPNVFAWCPST 190
           +VPD+    G   T +S   +  ++ ++ ++W  L +N +P+++   PS+
Sbjct: 387 IVPDEAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLSPSS 436

>ESR1_PIG (Q29040) Estrogen receptor (ER) (Estradiol receptor) (ER-alpha)|
          Length = 595

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +2

Query: 194 DGHQANTFGFPLVSKRNHTRSNSPRLELTLQKLLS 298
           D   AN +  PL+ K  HT+ NSP L LT  +++S
Sbjct: 285 DMRSANLWPSPLLIK--HTKKNSPVLSLTADQMIS 317

>ESR1_MESAU (Q9QZJ5) Estrogen receptor (ER) (Estradiol receptor) (ER-alpha)|
          Length = 595

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +2

Query: 182 GMQVDGHQANTFGFPLVSKRNHTRSNSPRLELTLQKLLS 298
           G   D    N +  PLV K  HT+ NSP L LT  +++S
Sbjct: 281 GPSGDMRATNLWPSPLVIK--HTKKNSPALSLTADQMVS 317


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,244,778
Number of Sequences: 219361
Number of extensions: 1531776
Number of successful extensions: 4306
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4305
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)