Clone Name | rbastl41e07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ARGJ1_ANASP (Q8YVA8) Arginine biosynthesis bifunctional protein ... | 28 | 5.7 | 2 | YC8B_METJA (P81319) Hypothetical protein MJ1282.2 | 28 | 7.4 | 3 | HBBC_TRENE (P45721) Hemoglobin beta-C subunit (Hemoglobin beta-C... | 27 | 9.7 | 4 | YMM1_CAEEL (P34489) Hypothetical protein K01B6.1 | 27 | 9.7 |
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>ARGJ1_ANASP (Q8YVA8) Arginine biosynthesis bifunctional protein argJ 1| [Includes: Glutamate N-acetyltransferase (EC 2.3.1.35) (Ornithine acetyltransferase) (Ornithine transacetylase) (OATase); Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate Length = 413 Score = 28.1 bits (61), Expect = 5.7 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = +1 Query: 154 SRAAQQRNSSVLKHNRTYINDSLLALFNANDQTVWLCNAALVKRKIDA 297 +RAA + +S+ T NDSL+AL N +T + K++A Sbjct: 212 TRAADRSFNSITVDGDTSTNDSLIALANGQSRTPAITEVGAESEKLEA 259
>YC8B_METJA (P81319) Hypothetical protein MJ1282.2| Length = 179 Score = 27.7 bits (60), Expect = 7.4 Identities = 18/68 (26%), Positives = 29/68 (42%) Frame = +2 Query: 32 ISITATTRQINNTNNDTYIYSCSNPCF*IVQITSQHWQLSHQGLPSKGTHQFLNTTAPT* 211 +S T+ NN+ N TYI N F + ++ + G F +TT+P Sbjct: 14 VSFINTSGYYNNSENVTYINMSMNGSFSGILYVKSSYKNYTITINESGNFVFNDTTSPIE 73 Query: 212 TTLFSHYS 235 L ++YS Sbjct: 74 VELLNNYS 81
>HBBC_TRENE (P45721) Hemoglobin beta-C subunit (Hemoglobin beta-C chain)| (Beta-C-globin) Length = 146 Score = 27.3 bits (59), Expect = 9.7 Identities = 16/54 (29%), Positives = 27/54 (50%) Frame = +1 Query: 160 AAQQRNSSVLKHNRTYINDSLLALFNANDQTVWLCNAALVKRKIDATDPSNFRM 321 AA +N+ V KH T +N A+ N +D T +++ + DP NF++ Sbjct: 52 AAIAQNAMVSKHGTTILNGLDRAVKNMDDITNTYAELSVLHSEKLHVDPDNFKL 105
>YMM1_CAEEL (P34489) Hypothetical protein K01B6.1| Length = 732 Score = 27.3 bits (59), Expect = 9.7 Identities = 16/44 (36%), Positives = 20/44 (45%) Frame = +1 Query: 100 QPMFLDSTNNKPTLATQPSRAAQQRNSSVLKHNRTYINDSLLAL 231 +PM S+ PT TQP R Q +S + N ND L L Sbjct: 234 RPMQGRSSPKSPTSPTQPGRRGSQASSLPSRRNTVSQNDLLATL 277 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,335,151 Number of Sequences: 219361 Number of extensions: 802813 Number of successful extensions: 1575 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1546 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1573 length of database: 80,573,946 effective HSP length: 87 effective length of database: 61,489,539 effective search space used: 1475748936 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)