ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl41e02 |
|---|---|
| Clone Library Name | barley_pub |
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 165 bits (417), Expect = 3e-41 Identities = 80/86 (93%), Positives = 80/86 (93%), Gaps = 5/86 (5%) Frame = -3 Query: 366 YMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGTVPYVLLRPS 187 YMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAG VPYVLLRPS Sbjct: 851 YMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPS 910 Query: 186 -----DGDPTDEKMVMEMGIPNSISI 124 DGDPTDEKMVMEMGIPNSISI Sbjct: 911 DGDPTDGDPTDEKMVMEMGIPNSISI 936
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 122 bits (307), Expect = 2e-28 Identities = 54/81 (66%), Positives = 66/81 (81%) Frame = -3 Query: 366 YMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGTVPYVLLRPS 187 YMGTH+EPAW +DG +++AF+ F++ R I EQV+EWN D R+NRHGAG VPYVLLRP Sbjct: 852 YMGTHQEPAWQRDGEVDKAFQVFQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRPL 911 Query: 186 DGDPTDEKMVMEMGIPNSISI 124 +G+P D K VMEMGIPNSISI Sbjct: 912 NGNPMDAKTVMEMGIPNSISI 932
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 70.1 bits (170), Expect = 1e-12 Identities = 37/81 (45%), Positives = 48/81 (59%) Frame = -3 Query: 366 YMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGTVPYVLLRPS 187 YMG + EPAW + ++ AFE+F ++ +D NN+P+ KNR GAG VPY LL+ Sbjct: 821 YMGEYAEPAWLAEPMVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLK-- 878 Query: 186 DGDPTDEKMVMEMGIPNSISI 124 P E V GIPNSISI Sbjct: 879 ---PFSEPGVTGRGIPNSISI 896
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 63.2 bits (152), Expect = 2e-10 Identities = 36/81 (44%), Positives = 46/81 (56%) Frame = -3 Query: 366 YMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGTVPYVLLRPS 187 Y+G +E +W + VIN AFE FK + + +DE N + KNR GAG V Y LL+ Sbjct: 821 YIGEQQEASWANEPVINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLK-- 878 Query: 186 DGDPTDEKMVMEMGIPNSISI 124 PT E V MG+P SISI Sbjct: 879 ---PTSEHGVTGMGVPYSISI 896
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 62.8 bits (151), Expect = 2e-10 Identities = 31/81 (38%), Positives = 44/81 (54%) Frame = -3 Query: 366 YMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGTVPYVLLRPS 187 Y+G + AWT D A EF R+ E+++ N DP R+NR GAG +PY L+ PS Sbjct: 824 YLGERPDEAWTADPAALAAAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPS 883 Query: 186 DGDPTDEKMVMEMGIPNSISI 124 G + G+PNS++I Sbjct: 884 SGPG-----ITCRGVPNSVTI 899
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 61.2 bits (147), Expect = 6e-10 Identities = 34/82 (41%), Positives = 42/82 (51%), Gaps = 1/82 (1%) Frame = -3 Query: 366 YMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGTVPYVLLRPS 187 Y+G + P WT D +AF+ F +I +V N DP RKNR G PY LL P+ Sbjct: 789 YLGQRDTPEWTSDAKALEAFKRFGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLLYPN 848 Query: 186 DGD-PTDEKMVMEMGIPNSISI 124 D D + GIPNSISI Sbjct: 849 TSDLKGDAAGLSARGIPNSISI 870
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 60.8 bits (146), Expect = 8e-10 Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 2/83 (2%) Frame = -3 Query: 366 YMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGTVPYVLLRPS 187 Y+G + P WT D AF+ F I ++ + N + KNR+G +PY+LL P+ Sbjct: 795 YLGQRDTPEWTSDAKALDAFKRFGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLLYPN 854 Query: 186 DGDPTDEK--MVMEMGIPNSISI 124 D T EK + MGIPNSISI Sbjct: 855 TSDVTKEKGQGLTAMGIPNSISI 877
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 60.1 bits (144), Expect = 1e-09 Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 1/82 (1%) Frame = -3 Query: 366 YMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGTVPYVLLRPS 187 Y+G + PAWT D +AF F + +I +V N D KNR+G PY+LL P+ Sbjct: 785 YLGQRDTPAWTSDARALEAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYPN 844 Query: 186 DGDPTDEKM-VMEMGIPNSISI 124 D T + GIPNSISI Sbjct: 845 TSDVTGAAAGITAKGIPNSISI 866
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 58.9 bits (141), Expect = 3e-09 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 1/82 (1%) Frame = -3 Query: 366 YMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGTVPYVLLRPS 187 Y+G + P WT D + F+ F + +I +V N+DP+ KNR+G PY+LL P+ Sbjct: 781 YLGQRDTPEWTSDPKALEVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPN 840 Query: 186 DGDPTDEKM-VMEMGIPNSISI 124 D + GIPNSISI Sbjct: 841 TSDHKGAAAGLTAKGIPNSISI 862
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 58.5 bits (140), Expect = 4e-09 Identities = 31/81 (38%), Positives = 46/81 (56%) Frame = -3 Query: 366 YMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGTVPYVLLRPS 187 Y+G + P WT D +AF++F +I +++ + NND +NRHG +PY LL PS Sbjct: 786 YLGERDNPNWTSDKRALEAFKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLLYPS 845 Query: 186 DGDPTDEKMVMEMGIPNSISI 124 ++ + GIPNSISI Sbjct: 846 -----SKEGLTFRGIPNSISI 861
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 58.2 bits (139), Expect = 5e-09 Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 1/82 (1%) Frame = -3 Query: 366 YMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPD-RKNRHGAGTVPYVLLRP 190 Y+G + P WT D QAF++F ++I E++ NNDP + NR G +PY LL P Sbjct: 763 YLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYP 822 Query: 189 SDGDPTDEKMVMEMGIPNSISI 124 S E+ + GIPNSISI Sbjct: 823 S-----SEEGLTFRGIPNSISI 839
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 58.2 bits (139), Expect = 5e-09 Identities = 32/81 (39%), Positives = 44/81 (54%) Frame = -3 Query: 366 YMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGTVPYVLLRPS 187 Y+G + W + +AFE+F E ++I + +DE N+D KNR G +PY LL PS Sbjct: 784 YLGQRDSKEWAAEKEALEAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPS 843 Query: 186 DGDPTDEKMVMEMGIPNSISI 124 E V GIPNS+SI Sbjct: 844 -----SEGGVTGRGIPNSVSI 859
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 57.8 bits (138), Expect = 6e-09 Identities = 32/81 (39%), Positives = 42/81 (51%) Frame = -3 Query: 366 YMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGTVPYVLLRPS 187 Y+G + P WT D QAF++F ++I E++ NND NR G +PY LL P+ Sbjct: 791 YLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLARKNNDQSLSNRLGPVQLPYTLLHPN 850 Query: 186 DGDPTDEKMVMEMGIPNSISI 124 T GIPNSISI Sbjct: 851 SEGLTCR------GIPNSISI 865
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 57.4 bits (137), Expect = 8e-09 Identities = 32/81 (39%), Positives = 43/81 (53%) Frame = -3 Query: 366 YMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGTVPYVLLRPS 187 Y+G E P WT D QAF++F +I ++ NNDP +R G +PY LL PS Sbjct: 789 YLGQRENPHWTSDSKALQAFQKFGNKLAEIEAKLTNKNNDPSLYHRVGPVQLPYTLLHPS 848 Query: 186 DGDPTDEKMVMEMGIPNSISI 124 ++ + GIPNSISI Sbjct: 849 -----SKEGLTFRGIPNSISI 864
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 55.8 bits (133), Expect = 2e-08 Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 1/82 (1%) Frame = -3 Query: 366 YMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGTVPYVLLRPS 187 Y+G + P WT D +AF+ F +I +V N DP KNR G PY L+ P+ Sbjct: 782 YLGQRDTPEWTSDPKALEAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFPN 841 Query: 186 DGDPTD-EKMVMEMGIPNSISI 124 D + + GIPNSISI Sbjct: 842 TSDNKGAAEGITARGIPNSISI 863
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 55.5 bits (132), Expect = 3e-08 Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 1/82 (1%) Frame = -3 Query: 366 YMGTH-EEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGTVPYVLLRP 190 Y+G E WT D V +AF+ F + +I E++ + NND +NR+G +PY LL P Sbjct: 790 YLGERIEGDDWTTDSVPKEAFKRFGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTLLYP 849 Query: 189 SDGDPTDEKMVMEMGIPNSISI 124 S E+ + GIPNSISI Sbjct: 850 S-----SEEGLTCRGIPNSISI 866
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 55.1 bits (131), Expect = 4e-08 Identities = 31/81 (38%), Positives = 43/81 (53%) Frame = -3 Query: 366 YMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGTVPYVLLRPS 187 Y+G + P WT D +AF+ F +I ++ E NND +NR G +PY LL PS Sbjct: 782 YLGERDNPNWTSDTRALEAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPS 841 Query: 186 DGDPTDEKMVMEMGIPNSISI 124 ++ + GIPNSISI Sbjct: 842 -----SKEGLTFRGIPNSISI 857
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 53.9 bits (128), Expect = 9e-08 Identities = 29/81 (35%), Positives = 41/81 (50%) Frame = -3 Query: 366 YMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGTVPYVLLRPS 187 Y+G + W D + A++ F ++I +D N D KNR GAG +PY L++ Sbjct: 849 YLGGEQTRPWNSDAAVQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMK-- 906 Query: 186 DGDPTDEKMVMEMGIPNSISI 124 P + V MGIPNS SI Sbjct: 907 ---PFSDSGVTGMGIPNSTSI 924
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 53.9 bits (128), Expect = 9e-08 Identities = 32/81 (39%), Positives = 40/81 (49%) Frame = -3 Query: 366 YMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGTVPYVLLRPS 187 Y+G E P WTKD AF+ F + I +Q+ + N D NR G PY LL Sbjct: 786 YLGQRESPEWTKDKEPLAAFDRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLL--- 842 Query: 186 DGDPTDEKMVMEMGIPNSISI 124 PT E + GIPNS+SI Sbjct: 843 --FPTSEGGLTGKGIPNSVSI 861
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 53.5 bits (127), Expect = 1e-07 Identities = 31/81 (38%), Positives = 42/81 (51%) Frame = -3 Query: 366 YMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGTVPYVLLRPS 187 Y+G E P WT D +AF+ F I +++ N+DP +NR G +PY LL S Sbjct: 789 YLGERETPNWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRS 848 Query: 186 DGDPTDEKMVMEMGIPNSISI 124 E+ + GIPNSISI Sbjct: 849 -----SEEGLTFKGIPNSISI 864
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 53.1 bits (126), Expect = 2e-07 Identities = 28/81 (34%), Positives = 46/81 (56%) Frame = -3 Query: 366 YMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGTVPYVLLRPS 187 Y+G + P WT + QAF+ F + ++I E++ N D +NR+G +PY +L P+ Sbjct: 786 YLGQRDNPNWTNNIKALQAFKRFGQKLKEIEEKIMGRNKDSSLRNRNGPVKMPYTVLLPT 845 Query: 186 DGDPTDEKMVMEMGIPNSISI 124 +++ + GIPNSISI Sbjct: 846 ----CEDEGLTFRGIPNSISI 862
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 52.8 bits (125), Expect = 2e-07 Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 1/82 (1%) Frame = -3 Query: 366 YMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGTVPYVLLRP- 190 Y+G + W D + A+ F ++I +D N D KNR GAG +PY L++P Sbjct: 866 YLGGEQTRPWNSDAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPF 925 Query: 189 SDGDPTDEKMVMEMGIPNSISI 124 SD T MGIPNS SI Sbjct: 926 SDAGVTG------MGIPNSTSI 941
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 52.4 bits (124), Expect = 3e-07 Identities = 32/81 (39%), Positives = 39/81 (48%) Frame = -3 Query: 366 YMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGTVPYVLLRPS 187 Y+G E P WTKD AFE F I +Q+ + N + NR G PY LL Sbjct: 785 YLGQRESPEWTKDKEPLAAFERFGNKLTDIEKQIMQRNGNNILTNRTGPVNAPYTLL--- 841 Query: 186 DGDPTDEKMVMEMGIPNSISI 124 PT E + GIPNS+SI Sbjct: 842 --FPTSEGGLTGKGIPNSVSI 860
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 50.1 bits (118), Expect = 1e-06 Identities = 31/81 (38%), Positives = 40/81 (49%) Frame = -3 Query: 366 YMGTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGTVPYVLLRPS 187 Y+G + WTKD AFE F + I ++ N+ KNR G VPY LL Sbjct: 784 YLGQRDSIEWTKDKEPLVAFERFGKMLSDIENRIMIMNSHKSWKNRSGPVNVPYTLL--- 840 Query: 186 DGDPTDEKMVMEMGIPNSISI 124 PT E+ + GIPNS+SI Sbjct: 841 --FPTSEEGLTGKGIPNSVSI 859
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 49.3 bits (116), Expect = 2e-06 Identities = 28/72 (38%), Positives = 40/72 (55%) Frame = -3 Query: 339 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGTVPYVLLRPSDGDPTDEKM 160 WT D +AF+ F + +I +++ E N D +NR+G +PY LL PS E+ Sbjct: 787 WTSDAGPLEAFKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYPS-----SEEG 841 Query: 159 VMEMGIPNSISI 124 + GIPNSISI Sbjct: 842 LTFRGIPNSISI 853
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 48.5 bits (114), Expect = 4e-06 Identities = 30/72 (41%), Positives = 35/72 (48%) Frame = -3 Query: 339 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGTVPYVLLRPSDGDPTDEKM 160 WT D A F R+ E ++ N D RKNR GAG +PY LL PS Sbjct: 852 WTADEAAVAAHGMFAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPS-----SPPG 906 Query: 159 VMEMGIPNSISI 124 V G+PNSISI Sbjct: 907 VTCRGVPNSISI 918
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 40.0 bits (92), Expect = 0.001 Identities = 19/51 (37%), Positives = 29/51 (56%) Frame = -3 Query: 339 WTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGTVPYVLLRPS 187 WT D +AF+ F + +I +++ + NND +NR G +PY LL PS Sbjct: 681 WTSDAGPLEAFKRFGKKLAEIEKKLVQKNNDETLRNRTGPAKMPYTLLYPS 731
>UREE_RHOS4 (Q3J156) Urease accessory protein ureE| Length = 182 Score = 31.6 bits (70), Expect = 0.49 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = -2 Query: 277 RGAGG*VEQRPRPEKPTRRRHGAVCAAQAVGR*SHGREDGDGDGHPQQHLHLS 119 RG G +E R P +P GA + +G HG G G HP H+H+S Sbjct: 120 RGLGLTLEPRTEPFRP---EGGAYGHGRTLGH-DHGPAQGHGHDHPHVHVHIS 168
>MUTS_STRT2 (Q5M6I1) DNA mismatch repair protein mutS| Length = 852 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/40 (30%), Positives = 21/40 (52%) Frame = -3 Query: 336 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAG 217 T+ G+I F+E + RK++ + W D + K R +G Sbjct: 407 TEGGIIRDGFDETLDKYRKVMSEGTSWIADIEAKEREASG 446
>MUTS_STRT1 (Q5M1Z0) DNA mismatch repair protein mutS| Length = 852 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/40 (30%), Positives = 21/40 (52%) Frame = -3 Query: 336 TKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAG 217 T+ G+I F+E + RK++ + W D + K R +G Sbjct: 407 TEGGIIRDGFDETLDKYRKVMSEGTSWIADIEAKEREASG 446
>PURA_STAAR (Q6GKS8) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 427 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -3 Query: 351 EEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNN 250 E P WT+D + EE E+ RK +E++ E N Sbjct: 372 ELPGWTEDVTSVRTLEELPENARKYLERISELCN 405
>PURA_STAAN (P99099) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 427 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -3 Query: 351 EEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNN 250 E P WT+D + EE E+ RK +E++ E N Sbjct: 372 ELPGWTEDVTSVRTLEELPENARKYLERISELCN 405
>PURA_STAAM (P65884) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 427 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -3 Query: 351 EEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNN 250 E P WT+D + EE E+ RK +E++ E N Sbjct: 372 ELPGWTEDVTSVRTLEELPENARKYLERISELCN 405
>MCSP_RAT (Q64298) Sperm mitochondrial-associated cysteine-rich protein| Length = 145 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = +3 Query: 273 PRSSWCSP*TPQMPG*SPHPLSMPALRACPC 365 P+S C+P P P P + PA ACPC Sbjct: 43 PKSPCCTPKVCPCPTPCPCPATCPAACACPC 73
>PURA_STAAW (Q8NYX6) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 427 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -3 Query: 351 EEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNN 250 E P WT+D + EE E+ RK +E++ E N Sbjct: 372 ELPGWTEDVTNVRTLEELPENARKYLERISELCN 405
>PURA_STAAS (Q6GD73) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 427 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -3 Query: 351 EEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNN 250 E P WT+D + EE E+ RK +E++ E N Sbjct: 372 ELPGWTEDVTNVRTLEELPENARKYLERISELCN 405
>PURA_STAAC (Q5HJX8) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 427 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -3 Query: 351 EEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNN 250 E P WT+D + EE E+ RK +E++ E N Sbjct: 372 ELPGWTEDVTNVRTLEELPENARKYLERISELCN 405
>PURA_BACHK (Q6HAG9) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 429 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = -3 Query: 351 EEPAWTKDGVINQAFEEFKESTRKIVEQVDE 259 E P WT+D ++ +E E+ RK VE+V E Sbjct: 372 ELPGWTEDITGVRSLDELPENARKYVERVSE 402
>PURA_BACCZ (Q630D5) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 429 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = -3 Query: 351 EEPAWTKDGVINQAFEEFKESTRKIVEQVDE 259 E P WT+D ++ +E E+ RK VE+V E Sbjct: 372 ELPGWTEDITGVRSLDELPENARKYVERVSE 402
>PURA_BACC1 (Q72WW1) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 429 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = -3 Query: 351 EEPAWTKDGVINQAFEEFKESTRKIVEQVDE 259 E P WT+D ++ +E E+ RK VE+V E Sbjct: 372 ELPGWTEDITGVRSLDELPENARKYVERVSE 402
>PURA_BACAN (Q81JI9) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 429 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = -3 Query: 351 EEPAWTKDGVINQAFEEFKESTRKIVEQVDE 259 E P WT+D ++ +E E+ RK VE+V E Sbjct: 372 ELPGWTEDITGVRSLDELPENARKYVERVSE 402
>MUTS_NEIMB (Q9JX94) DNA mismatch repair protein mutS| Length = 864 Score = 28.9 bits (63), Expect = 3.2 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Frame = -3 Query: 351 EEPAWTKDG-VINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAG 217 E W KDG VIN F + R+I DE+ D + K R G Sbjct: 408 EPSVWLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERERTG 453
>MUTS_NEIMA (Q9JWT7) DNA mismatch repair protein mutS| Length = 864 Score = 28.9 bits (63), Expect = 3.2 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Frame = -3 Query: 351 EEPAWTKDG-VINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAG 217 E W KDG VIN F + R+I DE+ D + K R G Sbjct: 408 EPSVWLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERERTG 453
>MUTS_NEIG1 (Q5F5J4) DNA mismatch repair protein mutS| Length = 864 Score = 28.9 bits (63), Expect = 3.2 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Frame = -3 Query: 351 EEPAWTKDG-VINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAG 217 E W KDG VIN F + R+I DE+ D + K R G Sbjct: 408 EPSVWLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERERTG 453
>GLGC_CORDI (Q6NHY8) Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)| (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (ADPGlc PPase) Length = 427 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/52 (28%), Positives = 27/52 (51%) Frame = -3 Query: 360 GTHEEPAWTKDGVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGTVPY 205 GT ++P+ T + N F ST +++ + E N+PD ++ G +PY Sbjct: 208 GTPDDPSMTFASMGNYVF-----STDALIQALKEDENNPDSEHDMGGDIIPY 254
>CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor 2 precursor| (Flamingo 1) (mFmi1) Length = 2920 Score = 28.5 bits (62), Expect = 4.2 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +2 Query: 209 GTVPAPCRFFRSGSLFHSSTCSTIFLVLSLNSSNAWLIT 325 G PCR SG S C+ + + ++SN WL T Sbjct: 31 GDQVGPCRSLGSGGRSSSGACAPVGWLCPASASNLWLYT 69
>Y463_CHRVO (Q7P0V2) UPF0341 protein CV_0463| Length = 258 Score = 28.5 bits (62), Expect = 4.2 Identities = 16/35 (45%), Positives = 17/35 (48%) Frame = -2 Query: 244 RPEKPTRRRHGAVCAAQAVGR*SHGREDGDGDGHP 140 R E T +HGAV A G H RE G G G P Sbjct: 45 RLELLTTGKHGAVYAEFVEGAARHRREQGGGRGQP 79
>ASPA_PROMM (Q7V5L6) Probable aspartoacylase (EC 3.5.1.15)| Length = 304 Score = 28.5 bits (62), Expect = 4.2 Identities = 9/22 (40%), Positives = 14/22 (63%) Frame = -3 Query: 267 VDEWNNDPDRKNRHGAGTVPYV 202 +D+W+ P+ N HG G VP + Sbjct: 23 LDQWSQTPELINTHGVGVVPVI 44
>RON_MOUSE (Q62190) Macrophage-stimulating protein receptor precursor (EC| 2.7.10.1) (MSP receptor) (p185-Ron) (Stem cell-derived tyrosine kinase) (CDw136 antigen) [Contains: Macrophage-stimulating protein receptor alpha chain; Macrophage-stimulating prote Length = 1378 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%) Frame = -3 Query: 240 RKNRHGA--GTVPYVLLRPSDGDPTDEKMVMEMGI 142 ++ R GA GT PY +L+ + P D K+ +E+ I Sbjct: 306 KRRRRGAPEGTQPYPVLQAAHSAPVDAKLAVELSI 340
>DEFR7_MOUSE (P50715) Defensin-related cryptdin, related sequence 7 precursor| (Cryptdin-related protein 4C-2) (CRS4C) Length = 91 Score = 27.7 bits (60), Expect = 7.1 Identities = 12/22 (54%), Positives = 12/22 (54%) Frame = +3 Query: 249 RCSTHPPAPRSSWCSP*TPQMP 314 RC PP PR SWC P P P Sbjct: 64 RCPRCPPCPRCSWC-PRCPTCP 84
>SM50_STRPU (P11994) 50 kDa spicule matrix protein precursor| Length = 445 Score = 27.7 bits (60), Expect = 7.1 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = -2 Query: 343 GMDKGWGDQPGI*GVQGEHQEDRGAGG 263 G GWG+QPG+ G Q G GG Sbjct: 270 GQQPGWGNQPGVGGRQPGMGGQPGVGG 296
>MCSP_MOUSE (P15265) Sperm mitochondrial-associated cysteine-rich protein| Length = 143 Score = 27.7 bits (60), Expect = 7.1 Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 4/42 (9%) Frame = +3 Query: 252 CSTHPPA-PRSSWC---SP*TPQMPG*SPHPLSMPALRACPC 365 C PP P+S C SP P P P P P CPC Sbjct: 27 CPQKPPCCPKSPCCPPKSPCCPPKPCPCPPPCPCPCPATCPC 68
>EDG8_HUMAN (Q9H228) Sphingosine 1-phosphate receptor Edg-8 (Endothelial| differentiation sphingolipid G-protein-coupled receptor 8) (Sphingosine 1-phosphate receptor 5) (S1P5) Length = 398 Score = 27.3 bits (59), Expect = 9.3 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = +1 Query: 22 NLVLIPIIPTAGPRD*RHSYLRLVELHTHTQG 117 N +L PII T RD RH+ LRLV H+ G Sbjct: 298 NSLLNPIIYTLTNRDLRHALLRLVCCGRHSCG 329
>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5| Length = 388 Score = 27.3 bits (59), Expect = 9.3 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +3 Query: 264 PPAPRSSWCSP*TPQMPG*SPHPLSMPALRACP 362 PP P S P P PG +P P MP + P Sbjct: 288 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
>TSGA_BUCAI (P57601) Protein tsgA homolog| Length = 388 Score = 27.3 bits (59), Expect = 9.3 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = -3 Query: 321 INQAFEEFKESTRKIVEQVDEWN 253 IN +FE+FK +T+ E ++WN Sbjct: 181 INSSFEKFKTNTKNSKETKEKWN 203
>CAC2_YEAST (Q04199) Chromatin assembly factor 1 subunit p60 (CAF-1 60 kDa| subunit) Length = 468 Score = 27.3 bits (59), Expect = 9.3 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 5/56 (8%) Frame = +2 Query: 215 VPAPCRFFRSGSLFHSSTCSTIFLVLSLNSSNAWLITPSFVH--AG---SSCVPMY 367 +P P R+ LFH+ T + F S++ ++ PS V+ AG ++CV +Y Sbjct: 238 LPCPGDVLRTNYLFHNETLPSFFRRCSISPCGGLVVIPSGVYKVAGDEVANCVYVY 293
>COAT_PAVHB (P07299) Probable coat protein VP1| Length = 781 Score = 27.3 bits (59), Expect = 9.3 Identities = 16/41 (39%), Positives = 19/41 (46%) Frame = -3 Query: 300 FKESTRKIVEQVDEWNNDPDRKNRHGAGTVPYVLLRPSDGD 178 FK RK + WN P H AG +PYVL P+ D Sbjct: 719 FKLGPRKATGR---WNPQPGVYPPHAAGHLPYVLYDPTATD 756 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,134,121 Number of Sequences: 219361 Number of extensions: 1293597 Number of successful extensions: 3990 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 3808 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3966 length of database: 80,573,946 effective HSP length: 98 effective length of database: 59,076,568 effective search space used: 1417837632 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
