Clone Name | rbastl41d12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | C90D2_ORYSA (Q94IW5) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxid... | 29 | 3.5 | 2 | SCW1_SCHPO (O74452) Cell wall integrity protein scw1 (Strong cel... | 28 | 4.6 |
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>C90D2_ORYSA (Q94IW5) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase)| Length = 490 Score = 28.9 bits (63), Expect = 3.5 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = +3 Query: 45 SLPLPTPGERKYRLLQALKFLASYLRYLV 131 SLP+ PG R YR LQA K +A ++ ++ Sbjct: 228 SLPIKLPGTRLYRSLQAKKKMARLIQRII 256
>SCW1_SCHPO (O74452) Cell wall integrity protein scw1 (Strong cell wall protein| 1) Length = 561 Score = 28.5 bits (62), Expect = 4.6 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +2 Query: 218 SSHMQAPSGKSSHPRSFSANGTSS 289 S+H Q S +S HPR FSAN S Sbjct: 344 SAHTQNSSAQSPHPRVFSANSAFS 367 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,873,327 Number of Sequences: 219361 Number of extensions: 616404 Number of successful extensions: 1297 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1279 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1297 length of database: 80,573,946 effective HSP length: 71 effective length of database: 64,999,315 effective search space used: 1559983560 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)