>gb|BC080064.1| Xenopus laevis An2, mRNA (cDNA clone MGC:84051 IMAGE:6948086),
           complete cds
          Length = 1873

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 176 cagtctcctctaggtctgcagtgg 199
           ||||||||||||||||||||||||
Sbjct: 259 cagtctcctctaggtctgcagtgg 236

>gb|M16259.1|XELAN2 X.laevis animal pole mRNA (An2) encoding the alpha subunit of
           mitochondrial ATPase, complete cds
          Length = 1827

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 176 cagtctcctctaggtctgcagtgg 199
           ||||||||||||||||||||||||
Sbjct: 260 cagtctcctctaggtctgcagtgg 237

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                     
Query: 223     tcatatgcaggcaccaagcgggaaaagttcacacccca 260
               |||||||||||||||||| || ||||| ||||| ||||
Sbjct: 4153128 tcatatgcaggcaccaagtggaaaaaggtcacagccca 4153091

>gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 gene sequence
          Length = 215241

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 7      catatatctgtgttcttattat 28
              ||||||||||||||||||||||
Sbjct: 189521 catatatctgtgttcttattat 189542

>dbj|AP007226.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0036B04
          Length = 136159

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 223   tcatatgcaggcaccaagcgggaaaagttcacacccca 260
             |||||||||||||||||| || ||||| ||||| ||||
Sbjct: 86387 tcatatgcaggcaccaagtggaaaaaggtcacagccca 86350

>dbj|AK102959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115H14, full
            insert sequence
          Length = 3192

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 223  tcatatgcaggcaccaagcgggaaaagttcacacccca 260
            |||||||||||||||||| || ||||| ||||| ||||
Sbjct: 2973 tcatatgcaggcaccaagtggaaaaaggtcacagccca 2936

>dbj|AK101165.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028D10, full
            insert sequence
          Length = 2721

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 223  tcatatgcaggcaccaagcgggaaaagttcacacccca 260
            |||||||||||||||||| || ||||| ||||| ||||
Sbjct: 2371 tcatatgcaggcaccaagtggaaaaaggtcacagccca 2334

>dbj|AK073624.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048G07, full
            insert sequence
          Length = 2587

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 223  tcatatgcaggcaccaagcgggaaaagttcacacccca 260
            |||||||||||||||||| || ||||| ||||| ||||
Sbjct: 2368 tcatatgcaggcaccaagtggaaaaaggtcacagccca 2331

>gb|AC153622.11| Mus musculus 6 BAC RP23-301N17 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 195335

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 57     cccactccaggagaaagaaag 77
              |||||||||||||||||||||
Sbjct: 172434 cccactccaggagaaagaaag 172414

>gb|AC170265.4| Mus musculus  BAC RP23-54H4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 210754

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 57     cccactccaggagaaagaaag 77
              |||||||||||||||||||||
Sbjct: 135770 cccactccaggagaaagaaag 135790

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 260     aggtcgttttcggcgaacgg 279
               ||||||||||||||||||||
Sbjct: 1367779 aggtcgttttcggcgaacgg 1367798

>gb|AC116441.2| Homo sapiens chromosome 3 clone RP11-20O23, complete sequence
          Length = 142374

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 174  tacagtctcctctaggtctgcagt 197
            ||||||||||||||| ||||||||
Sbjct: 8531 tacagtctcctctagatctgcagt 8554

>gb|AC122683.4| Homo sapiens 3 RP11-528N21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 142771

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 174   tacagtctcctctaggtctgcagt 197
             ||||||||||||||| ||||||||
Sbjct: 92594 tacagtctcctctagatctgcagt 92617

>emb|AL844865.6| Mouse DNA sequence from clone RP23-350L23 on chromosome 2, complete
             sequence
          Length = 197785

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    gcccactccaggagaaagaa 75
             ||||||||||||||||||||
Sbjct: 17193 gcccactccaggagaaagaa 17212


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,992,552
Number of Sequences: 3902068
Number of extensions: 1992552
Number of successful extensions: 36118
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 36079
Number of HSP's gapped (non-prelim): 39
length of query: 289
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 267
effective length of database: 17,147,199,772
effective search space: 4578302339124
effective search space used: 4578302339124
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)