ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl41d10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RW1_DROME (Q9V7H4) RW1 protein homolog 28 5.5
2ESCO2_MOUSE (Q8CIB9) N-acetyltransferase ESCO2 (EC 2.3.1.-) (Est... 28 7.2
3APEA_THENE (O86957) Probable M18-family aminopeptidase 1 (EC 3.4... 27 9.4
4ADA33_MOUSE (Q923W9) ADAM 33 precursor (EC 3.4.24.-) (A disinteg... 27 9.4
5KPTA_BURS3 (Q395F2) Probable RNA 2'-phosphotransferase (EC 2.7.-.-) 27 9.4
6KLDC4_HUMAN (Q8TBB5) Kelch domain-containing protein 4 27 9.4
7NOTC2_HUMAN (Q04721) Neurogenic locus notch homolog protein 2 pr... 27 9.4
8NOTC2_MOUSE (O35516) Neurogenic locus notch homolog protein 2 pr... 27 9.4

>RW1_DROME (Q9V7H4) RW1 protein homolog|
          Length = 1567

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -3

Query: 228  SSAGYR-PMHRRVQKKSLVLPNNEVDGVMFPPALRCFSSSWQTSGIV 91
            +  G+R P  ++ QK +     N       P AL+C S+ W+TS  V
Sbjct: 1305 AGVGFRKPERKQRQKLNFGQTTNSTSPPESPDALKCISNPWETSSRV 1351



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>ESCO2_MOUSE (Q8CIB9) N-acetyltransferase ESCO2 (EC 2.3.1.-) (Establishment of|
           cohesion 1 homolog 2) (ECO1 homolog 2)
          Length = 592

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
 Frame = -3

Query: 342 LTPELACVCVC----DRELCRCMNN*GNKGACTTGLIGMRKLSSAGYRPMHRRVQKKSLV 175
           L  E   +C+     D+ +     N   K  CT      +K  +A Y+P ++ ++ KS  
Sbjct: 111 LIRECRSICLATESGDKPIPSVTENIQRKPVCTKKNKKKQKSLTAKYQPNYKHIKSKSRN 170

Query: 174 LPNNEVDGVMFPPAL 130
           L N++ + V + P +
Sbjct: 171 LKNSKPNQVTYKPVV 185



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>APEA_THENE (O86957) Probable M18-family aminopeptidase 1 (EC 3.4.11.-)|
          Length = 452

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 120 KNNGGPEGTSHHRLHYWAKQGIFS 191
           K  GGPE  + H + YW K  + S
Sbjct: 303 KIQGGPEIQNSHSMRYWKKSAVIS 326



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>ADA33_MOUSE (Q923W9) ADAM 33 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase domain 33)
          Length = 797

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 7/57 (12%)
 Frame = -3

Query: 234 KLSSAGYRPMHRRVQKKSLVLPNNEVDGVMFPPALRCFSSSWQT-------SGIVVI 85
           KL + GY   H R     +VL  N  D   +   +R F  SW         SG++V+
Sbjct: 87  KLLAPGYTETHYRPDGHPVVLSPNHTDHCQYHGRVRGFRESWVVLSTCSGMSGLIVL 143



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>KPTA_BURS3 (Q395F2) Probable RNA 2'-phosphotransferase (EC 2.7.-.-)|
          Length = 194

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 229 ELPHADQTRRARTLIALIIHAPAQLSV 309
           ELP  D TR +RTL  L+ HAP  + +
Sbjct: 7   ELPAPDATRISRTLSYLLRHAPQTIGL 33



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>KLDC4_HUMAN (Q8TBB5) Kelch domain-containing protein 4|
          Length = 520

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 120 KNNGGPEGTSHHRLHYWAKQ 179
           K+ GGP G S HR+  W +Q
Sbjct: 169 KSTGGPSGRSGHRMVAWKRQ 188



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>NOTC2_HUMAN (Q04721) Neurogenic locus notch homolog protein 2 precursor (Notch|
           2) (hN2) [Contains: Notch 2 extracellular truncation;
           Notch 2 intracellular domain]
          Length = 2471

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 7/53 (13%)
 Frame = -3

Query: 324 CVCV-------CDRELCRCMNN*GNKGACTTGLIGMRKLSSAGYRPMHRRVQK 187
           C+C        C  ++  C++N    G CT GL G + L  AG+  ++  V K
Sbjct: 706 CICPEGPHHPSCYSQVNECLSNPCIHGNCTGGLSGYKCLCDAGWVGINCEVDK 758



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>NOTC2_MOUSE (O35516) Neurogenic locus notch homolog protein 2 precursor (Notch|
           2) (Motch B) [Contains: Notch 2 extracellular
           truncation; Notch 2 intracellular domain]
          Length = 2470

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 7/53 (13%)
 Frame = -3

Query: 324 CVCV-------CDRELCRCMNN*GNKGACTTGLIGMRKLSSAGYRPMHRRVQK 187
           C+C        C  ++  C++N    G CT GL G + L  AG+  ++  V K
Sbjct: 704 CICPEGPHHPSCYSQVNECLSNPCIHGNCTGGLSGYKCLCDAGWVGVNCEVDK 756


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,901,603
Number of Sequences: 219361
Number of extensions: 1054999
Number of successful extensions: 2465
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2462
length of database: 80,573,946
effective HSP length: 96
effective length of database: 59,515,290
effective search space used: 1428366960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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