>UNC89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Uncoordinated protein|
            89)
          Length = 8081

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 20/69 (28%), Positives = 30/69 (43%)
 Frame = +3

Query: 36   AVYTTSTTHEVGNTTTAASQLFEYNNNILHKPPRPRKKNGLQNSLHQIPSGLKCTQVDRG 215
            A Y    T E GNT  ++  L      +      P+   GL++ +  I S +K      G
Sbjct: 4559 AEYKVVLTDEDGNTADSSCAL-----TVKLPAKEPKIIKGLEDQVVSIGSPIKLEIETSG 4613

Query: 216  APKKVSWYQ 242
            +PK V WY+
Sbjct: 4614 SPKTVKWYK 4622

>CHE1_CAEEL (Q966L8) Transcription factor che-1 (Abnormal chemotaxis protein 1)|
          Length = 279

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
 Frame = +1

Query: 31  YLQCTQLVLHMRSETPQQQPH---NCSNIITTSFTNRRGLEKRMGSK-----ILFIKFHQ 186
           + Q + LV H R+ T ++ P+    C    T S T  + L    G K     I  +KF Q
Sbjct: 209 FSQSSSLVTHRRTHTGER-PYPCAQCEKAFTDSSTLTKHLRTHTGHKPYVCSICMMKFTQ 267

Query: 187 ALNVHKLIEAHR 222
           + N+H+ ++ H+
Sbjct: 268 SGNLHRHMKTHK 279

>RT16_MYXXA (P23072) RNA-directed DNA polymerase from retron Mx162-RT (EC|
           2.7.7.49) (Reverse transcriptase) (Mx162-RT)
          Length = 485

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +1

Query: 289 KKPGYKETSDSSQVSTPPPSLQAGSRPLQSHLLELLPIH 405
           K+ G K T     +++P P L+A  R + S+++E LP+H
Sbjct: 188 KRDGSKRT-----ITSPKPELKAAQRWVLSNVVERLPVH 221

>DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in|
           azoospermia-associated protein 1) (Proline-rich Vg1
           mRNA-binding protein)
          Length = 360

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 30/108 (27%), Positives = 39/108 (36%), Gaps = 11/108 (10%)
 Frame = +1

Query: 88  PHNCSNIITTSFTNRRGL----------EKRMGSKILFIKFHQALNVHKLIEAHRKR*AG 237
           PHNC       + NR G+          EK+      FI F    +V + +  H     G
Sbjct: 122 PHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMG 181

Query: 238 ISTKLSCA*ILLQIARTKKPGYKETSDS-SQVSTPPPSLQAGSRPLQS 378
              ++  A               E  DS SQ   PP S Q GSR +QS
Sbjct: 182 KKVEVKRA---------------EPRDSKSQTPGPPGSNQWGSRAMQS 214

>POLN_MIDDV (P03318) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
           [Contains: Nonstructural protein 3 (nsP3); Nonstructural
           protein 3' (nsP3'); RNA-directed RNA polymerase nsP4 (EC
           2.7.7.48) (Nonstructural protein 4) (nsP4)] (Fragment)
          Length = 994

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = -2

Query: 179 NLMKRILEPILFSRPRRFVKDVVIIFEQL*GCCCGVSD 66
           N+  +I++ ++  RP  F     I+F+Q+ G CC V+D
Sbjct: 871 NMEVKIIDAVMCERPPYFCGGF-IVFDQVTGTCCRVAD 907

>G3ST2_MOUSE (Q6XQH0) Galactose 3-O-sulfotransferase 2 (EC 2.8.2.-) (Gal3ST-2)|
           (Galbeta1-3GalNAc 3'-sulfotransferase 2)
           (Beta-galactose-3-O-sulfotransferase 2)
          Length = 394

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +2

Query: 269 SFKLHVPKNLGTKKHLIPPKYQRLLHPCRLEAGRFNHICLSF 394
           SFKL+V ++  T  HL P   +R+ H C L+   + H   +F
Sbjct: 247 SFKLNV-RSQSTVSHLTPESQERVQHWCALDWQLYQHFNRTF 287

>ACE_CHICK (Q10751) Angiotensin-converting enzyme (EC 3.4.15.1) (Dipeptidyl|
           carboxypeptidase I) (Kininase II) (Fragment)
          Length = 1193

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 19/53 (35%), Positives = 23/53 (43%)
 Frame = +3

Query: 51  STTHEVGNTTTAASQLFEYNNNILHKPPRPRKKNGLQNSLHQIPSGLKCTQVD 209
           ST   V N  T AS  +EYN NI         +  L  S H I  G++  Q D
Sbjct: 556 STAEVVWNAYTEAS--WEYNTNITDHNKEVMLEKNLAMSKHTIEYGMRARQFD 606

>CWC26_USTMA (Q4PI72) Pre-mRNA-splicing factor CWC26|
          Length = 339

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +3

Query: 129 PPRPRKKNGLQNSLHQIPSGLKCTQVDRGAPKKVSWYQYKAKL 257
           P  P+ K G   +   IP G +   VDRG   + ++++ KA+L
Sbjct: 282 PSMPKYKGGWPPNRFNIPPGYRWDGVDRGNGYEKAFFERKAQL 324

>VIS_AGRVI (Q04554) Vitopine synthase (EC 1.5.1.-)|
          Length = 360

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
 Frame = +3

Query: 84  AASQLFEYNNNILHKPPRPRKKNGLQNSLHQIPSGLK---CTQVDRGAPKKVSWYQYKAK 254
           AAS  F   N ++H P     K+ ++N +  +P   +      ++R         +  A 
Sbjct: 187 AASIFFSNTNPVVHPPGILVAKDAIENGMSPLPKFYREFVPAAIERVQELDNERLEIIAA 246

Query: 255 LRLNSPSNCTYQKTW 299
           L L S +  TY K W
Sbjct: 247 LGLESETGFTYSKKW 261

>DPYL5_RAT (Q9JHU0) Dihydropyrimidinase-related protein 5 (DRP-5) (ULIP6|
           protein)
          Length = 564

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +3

Query: 102 EYNNNILHKPPRPRKKNGLQNSLHQIPSGLKCTQVDRGAPKKVS 233
           E    +   P RP  ++G    LH+    L  +Q+D   PK+ S
Sbjct: 506 EMGTPLADTPTRPVTRHGGMRDLHESSFSLSGSQIDDHVPKRAS 549

>DPYL5_MOUSE (Q9EQF6) Dihydropyrimidinase-related protein 5 (DRP-5) (Collapsin|
           response mediator protein 5) (CRMP-5)
          Length = 564

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +3

Query: 102 EYNNNILHKPPRPRKKNGLQNSLHQIPSGLKCTQVDRGAPKKVS 233
           E    +   P RP  ++G    LH+    L  +Q+D   PK+ S
Sbjct: 506 EMGTPLADTPTRPVTRHGGMRDLHESSFSLSGSQIDDHVPKRAS 549

>DPYL5_HUMAN (Q9BPU6) Dihydropyrimidinase-related protein 5 (DRP-5) (ULIP6|
           protein) (Collapsin response mediator protein 5)
           (CRMP-5) (CRMP3-associated molecule) (CRAM)
          Length = 564

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +3

Query: 102 EYNNNILHKPPRPRKKNGLQNSLHQIPSGLKCTQVDRGAPKKVS 233
           E    +   P RP  ++G    LH+    L  +Q+D   PK+ S
Sbjct: 506 EMGTPLADTPTRPVTRHGGMRDLHESSFSLSGSQIDDHVPKRAS 549

>CDGT_BACLI (P14014) Cyclomaltodextrin glucanotransferase precursor (EC|
           2.4.1.19) (Cyclodextrin-glycosyltransferase) (CGTase)
          Length = 718

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 39  VYTTSTTHEVGNTTTAASQLFEYNNNILHKPP 134
           +Y T    E+GN TT A+ +    N ++H  P
Sbjct: 636 IYLTGNVSELGNWTTGAASIGPAFNQVIHAYP 667

>AVR2B_XENLA (P27041) Activin receptor type 2B precursor (EC 2.7.11.30) (Activin|
           receptor type IIB) (ACTR-IIB)
          Length = 511

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +1

Query: 283 RTKKPGYKETSDSSQVSTPPPSLQAGSRPLQ 375
           R +KP Y     +     PPPS   G +PLQ
Sbjct: 160 RHRKPSYGHVEINEDPGLPPPSPLVGLKPLQ 190


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,671,393
Number of Sequences: 219361
Number of extensions: 1264447
Number of successful extensions: 3302
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3301
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 1354661664
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)