Clone Name | rbastl41d05 |
---|---|
Clone Library Name | barley_pub |
>emb|AL031000.1|HS795G23 Human DNA sequence from clone RP4-795G23 on chromosome Xq13.1-21.1 Contains the TBX22 gene for T-box 22, complete sequence Length = 132029 Score = 44.1 bits (22), Expect = 0.23 Identities = 25/26 (96%) Strand = Plus / Plus Query: 100 aaattagtgacaacaaatctacaaaa 125 |||||||||||||||||| ||||||| Sbjct: 26499 aaattagtgacaacaaatatacaaaa 26524
>gb|AC136475.7| Homo sapiens chromosome 11, clone RP11-326C3, complete sequence Length = 143779 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 agagcagagcaggggaaacag 57 ||||||||||||||||||||| Sbjct: 111920 agagcagagcaggggaaacag 111900
>gb|AC138230.5| Homo sapiens chromosome 11, clone RP13-317D12, complete sequence Length = 187160 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 agagcagagcaggggaaacag 57 ||||||||||||||||||||| Sbjct: 44612 agagcagagcaggggaaacag 44592
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 42.1 bits (21), Expect = 0.92 Identities = 24/25 (96%) Strand = Plus / Plus Query: 54 acagcaagcttgaaaaaacggggtt 78 |||| |||||||||||||||||||| Sbjct: 2283394 acagaaagcttgaaaaaacggggtt 2283418
>emb|AL591214.8| Human DNA sequence from clone RP11-18I23 on chromosome 9 Contains part of one variant of the ROR2 gene for receptor tyrosine kinase-like orphan receptor 2, complete sequence Length = 66959 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 agagcaggggaaacagcaag 61 |||||||||||||||||||| Sbjct: 18423 agagcaggggaaacagcaag 18442
>emb|AL356479.12| Human DNA sequence from clone RP11-48A6 on chromosome 1p21.3-22.3 Contains the 5' end of a novel gene, complete sequence Length = 128142 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 aaaaattagtgacaacaaat 117 |||||||||||||||||||| Sbjct: 49414 aaaaattagtgacaacaaat 49395
>gb|AC092931.8| Homo sapiens 3 BAC RP11-131O20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152737 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 aaaaattagtgacaacaaat 117 |||||||||||||||||||| Sbjct: 53760 aaaaattagtgacaacaaat 53779
>gb|AC020912.6| Homo sapiens chromosome 19 clone CTD-2583G20, complete sequence Length = 163225 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 atctacaaaagaggctggct 135 |||||||||||||||||||| Sbjct: 12630 atctacaaaagaggctggct 12649
>emb|BX908803.7| Zebrafish DNA sequence from clone CH211-13C14 in linkage group 3, complete sequence Length = 186802 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 acaacaaatctacaaaagaggctg 132 ||||||||||||||||| |||||| Sbjct: 117509 acaacaaatctacaaaaaaggctg 117532
>gb|AC096538.2| Homo sapiens chromosome 1 clone RP11-146P11, complete sequence Length = 173048 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 aaaaattagtgacaacaaat 117 |||||||||||||||||||| Sbjct: 26196 aaaaattagtgacaacaaat 26177
>gb|AC093795.3| Homo sapiens BAC clone RP11-299P3 from 4, complete sequence Length = 183917 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 aaaaattagtgacaacaaat 117 |||||||||||||||||||| Sbjct: 76188 aaaaattagtgacaacaaat 76169
>gb|AC073578.17| Homo sapiens 12 BAC RP11-897M7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 121698 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 aaaattagtgacaacaaatc 118 |||||||||||||||||||| Sbjct: 100758 aaaattagtgacaacaaatc 100777 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,942,794 Number of Sequences: 3902068 Number of extensions: 1942794 Number of successful extensions: 34519 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 34496 Number of HSP's gapped (non-prelim): 23 length of query: 278 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 256 effective length of database: 17,147,199,772 effective search space: 4389683141632 effective search space used: 4389683141632 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)