ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl41c12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK102301.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 2e-20
2ref|NM_188560.1| Oryza sativa (japonica cultivar-group), predic... 103 3e-19
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 101 1e-18
4dbj|AP002902.2| Oryza sativa (japonica cultivar-group) genomic D... 101 1e-18
5dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic D... 101 1e-18
6ref|NM_105085.2| Arabidopsis thaliana ATP binding / ATPase/ nucl... 68 2e-08
7ref|NM_179511.1| Arabidopsis thaliana ATP binding / ATPase/ nucl... 68 2e-08
8gb|AY056097.1| Arabidopsis thaliana At1g64110/F22C12_22 mRNA, co... 68 2e-08
9gb|BT006360.1| Arabidopsis thaliana At1g64110/F22C12_22 gene, co... 68 2e-08
10gb|AC007764.2|AC007764 Genomic sequence for Arabidopsis thaliana... 64 3e-07
11dbj|AB009055.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 60 4e-06
12gb|AC150980.20| Medicago truncatula clone mth2-165j9, complete s... 54 3e-04
13gb|AC148655.4| Medicago truncatula clone mth2-61c11, complete se... 54 3e-04
14emb|AL080275.20|HSDJ149L1 Human DNA sequence from clone RP1-149L... 44 0.26
15ref|NM_116481.2| Arabidopsis thaliana ATP binding / ATPase/ nucl... 42 1.0
16gb|AY090948.1| Arabidopsis thaliana unknown protein (At4g02480) ... 42 1.0
17emb|AL161494.2|ATCHRIV6 Arabidopsis thaliana DNA chromosome 4, c... 42 1.0
18gb|AC005146.1| Homo sapiens 12 PAC RP1-157K6 (Roswell Park Cance... 42 1.0
19gb|AF069298.1|T14P8 Arabidopsis thaliana BAC T14P8 42 1.0
20gb|AC120551.5| Mus musculus chromosome 1, clone RP24-338A22, com... 42 1.0
21gb|AC113121.27| Mus musculus chromosome 8, clone RP23-347G12, co... 40 4.1
22ref|XM_519962.1| PREDICTED: Pan troglodytes KIAA0143 protein (LO... 40 4.1
23gb|AC006794.3| Caenorhabditis elegans cosmid Y50D4A, complete se... 40 4.1
24gb|AC104613.2| Drosophila melanogaster clone BACR06K07, complete... 40 4.1
25gb|AC147628.4| Mus musculus BAC clone RP24-476D20 from chromosom... 40 4.1
26ref|XM_615125.2| PREDICTED: Bos taurus similar to RIKEN cDNA C92... 40 4.1
27gb|BC007482.1| Mus musculus RIKEN cDNA C920006C10 gene, mRNA (cD... 40 4.1
28gb|BC071611.1| Homo sapiens KIAA0143 protein, mRNA (cDNA clone I... 40 4.1
29gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 40 4.1
30gb|AC091276.7| Mus musculus chromosome 15, clone RP23-167B4, com... 40 4.1
31gb|BC108667.1| Homo sapiens KIAA0143 protein, mRNA (cDNA clone I... 40 4.1
32emb|AL355604.11| Human DNA sequence from clone RP11-404E6 on chr... 40 4.1
33gb|AC164524.5| Mus musculus BAC RP23-438F8 (Roswell Park Cancer... 40 4.1
34emb|CR749243.1| Homo sapiens mRNA; cDNA DKFZp781J0562 (from clon... 40 4.1
35gb|AC100868.2| Homo sapiens chromosome 8, clone RP11-246K8, comp... 40 4.1
36gb|AC026596.9| Homo sapiens chromosome 8, clone RP11-380O15, com... 40 4.1
37dbj|D63477.1| Homo sapiens mRNA for KIAA0143 gene, partial cds 40 4.1
38gb|AC092817.2| Homo sapiens chromosome 8, clone RP11-240B13, com... 40 4.1
39gb|AC013432.4| Drosophila melanogaster, chromosome X, region 15F... 40 4.1
40dbj|AK161250.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 4.1
41dbj|AK018695.1| Mus musculus 2 days neonate thymus thymic cells ... 40 4.1
42gb|AC140489.2| Mus musculus BAC clone RP24-144C10 from chromosom... 40 4.1
43dbj|AK032461.1| Mus musculus adult male olfactory brain cDNA, RI... 40 4.1
44dbj|AK044475.1| Mus musculus adult retina cDNA, RIKEN full-lengt... 40 4.1
45dbj|AK044000.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 40 4.1
46dbj|AK030074.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 4.1
47gb|AC155657.8| Mus musculus 6 BAC RP24-113L15 (Roswell Park Canc... 40 4.1
48ref|NM_015137.1| Homo sapiens KIAA0143 protein (KIAA0143), mRNA 40 4.1
49ref|NM_133766.2| Mus musculus RIKEN cDNA C920006C10 gene (C92000... 40 4.1
50gb|AC006517.46| Homo sapiens 12 BAC RP11-277J24 (Roswell Park Ca... 40 4.1
51dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 40 4.1
52dbj|AB158474.1| Mus musculus KIAA0143 mRNA for similar to conser... 40 4.1
53emb|AL929331.15| Zebrafish DNA sequence from clone DKEY-16O9, co... 40 4.1
54dbj|AK129065.1| Mus musculus mRNA for mKIAA0143 protein 40 4.1
55gb|AC140070.3| Mus musculus BAC clone RP24-161L16 from 9, comple... 40 4.1
56gb|AE003609.4| Drosophila melanogaster chromosome 2L, section 18... 40 4.1
57gb|AE003505.3| Drosophila melanogaster chromosome X, section 57 ... 40 4.1
58gb|AC005750.1|AC005750 Drosophila melanogaster DNA sequence (P1s... 40 4.1
59gb|BC032092.1| Mus musculus RIKEN cDNA C920006C10 gene, mRNA (cD... 40 4.1
60gb|L77738.1|SYNAEVRV Retroviral vector leader sequence 40 4.1 
>dbj|AK102301.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089N14, full
            insert sequence
          Length = 2913

 Score =  107 bits (54), Expect = 2e-20
 Identities = 105/122 (86%)
 Strand = Plus / Minus

                                                                        
Query: 190  gttcagaggaagtatgtcaactgctccttcttcctcgagccgccttcaccatacaaatta 249
            |||||||| |||||||||||||| |  ||||| || ||||| |||||||| ||||| | |
Sbjct: 2715 gttcagagaaagtatgtcaactgttgtttctttctggagcctccttcaccgtacaactca 2656

                                                                        
Query: 250  ttccattgcttcaactcacccattatggaacctttagcagcaaaactcgccgccacctgg 309
            ||||||||||||| |||||||||||| |  |||| ||||||||| || ||||||||||||
Sbjct: 2655 ttccattgcttcagctcacccattattgttccttcagcagcaaagcttgccgccacctgg 2596

              
Query: 310  tt 311
            ||
Sbjct: 2595 tt 2594



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                     
Query: 129  ctattttctcgtagttgtttgccatctattctactttccaaattatgttcatacact 185
            |||||||| | | ||||||| || ||||||||| ||| |||||||||||||||||||
Sbjct: 2787 ctattttcacatggttgttttccgtctattctagttttcaaattatgttcatacact 2731
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>ref|NM_188560.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2433

 Score =  103 bits (52), Expect = 3e-19
 Identities = 103/120 (85%)
 Strand = Plus / Minus

                                                                        
Query: 192  tcagaggaagtatgtcaactgctccttcttcctcgagccgccttcaccatacaaattatt 251
            |||||| |||||||||||||| |  ||||| || ||||| |||||||| ||||| | |||
Sbjct: 2433 tcagagaaagtatgtcaactgttgtttctttctggagcctccttcaccgtacaactcatt 2374

                                                                        
Query: 252  ccattgcttcaactcacccattatggaacctttagcagcaaaactcgccgccacctggtt 311
            ||||||||||| |||||||||||| |  |||| ||||||||| || ||||||||||||||
Sbjct: 2373 ccattgcttcagctcacccattattgttccttcagcagcaaagcttgccgccacctggtt 2314
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  101 bits (51), Expect = 1e-18
 Identities = 102/119 (85%)
 Strand = Plus / Plus

                                                                           
Query: 190     gttcagaggaagtatgtcaactgctccttcttcctcgagccgccttcaccatacaaatta 249
               |||||||| |||||||||||||| |  ||||| || ||||| |||||||| ||||| | |
Sbjct: 6970110 gttcagagaaagtatgtcaactgttgtttctttctggagcctccttcaccgtacaactca 6970169

                                                                          
Query: 250     ttccattgcttcaactcacccattatggaacctttagcagcaaaactcgccgccacctg 308
               ||||||||||||| |||||||||||| |  |||| ||||||||| || |||||||||||
Sbjct: 6970170 ttccattgcttcagctcacccattattgttccttcagcagcaaagcttgccgccacctg 6970228



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                        
Query: 129     ctattttctcgtagttgtttgccatctattctactttccaaattatgttcatacact 185
               |||||||| | | ||||||| || ||||||||| ||| |||||||||||||||||||
Sbjct: 6970038 ctattttcacatggttgttttccgtctattctagttttcaaattatgttcatacact 6970094
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>dbj|AP002902.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0492F05
          Length = 159242

 Score =  101 bits (51), Expect = 1e-18
 Identities = 102/119 (85%)
 Strand = Plus / Plus

                                                                          
Query: 190    gttcagaggaagtatgtcaactgctccttcttcctcgagccgccttcaccatacaaatta 249
              |||||||| |||||||||||||| |  ||||| || ||||| |||||||| ||||| | |
Sbjct: 137834 gttcagagaaagtatgtcaactgttgtttctttctggagcctccttcaccgtacaactca 137893

                                                                         
Query: 250    ttccattgcttcaactcacccattatggaacctttagcagcaaaactcgccgccacctg 308
              ||||||||||||| |||||||||||| |  |||| ||||||||| || |||||||||||
Sbjct: 137894 ttccattgcttcagctcacccattattgttccttcagcagcaaagcttgccgccacctg 137952



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                       
Query: 129    ctattttctcgtagttgtttgccatctattctactttccaaattatgttcatacact 185
              |||||||| | | ||||||| || ||||||||| ||| |||||||||||||||||||
Sbjct: 137762 ctattttcacatggttgttttccgtctattctagttttcaaattatgttcatacact 137818
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>dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0443E07
          Length = 159440

 Score =  101 bits (51), Expect = 1e-18
 Identities = 102/119 (85%)
 Strand = Plus / Plus

                                                                         
Query: 190   gttcagaggaagtatgtcaactgctccttcttcctcgagccgccttcaccatacaaatta 249
             |||||||| |||||||||||||| |  ||||| || ||||| |||||||| ||||| | |
Sbjct: 91928 gttcagagaaagtatgtcaactgttgtttctttctggagcctccttcaccgtacaactca 91987

                                                                        
Query: 250   ttccattgcttcaactcacccattatggaacctttagcagcaaaactcgccgccacctg 308
             ||||||||||||| |||||||||||| |  |||| ||||||||| || |||||||||||
Sbjct: 91988 ttccattgcttcagctcacccattattgttccttcagcagcaaagcttgccgccacctg 92046



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                      
Query: 129   ctattttctcgtagttgtttgccatctattctactttccaaattatgttcatacact 185
             |||||||| | | ||||||| || ||||||||| ||| |||||||||||||||||||
Sbjct: 91856 ctattttcacatggttgttttccgtctattctagttttcaaattatgttcatacact 91912
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>ref|NM_105085.2| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/
            nucleotide binding AT1G64110 transcript variant
            AT1G64110.1 mRNA, complete cds
          Length = 2868

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                        
Query: 217  ttcttcctcgagccgccttcaccatacaaattattccattgcttcaactcacccattatg 276
            ||||||||||| || ||||| |||||||| | |||||| ||||||||||| ||||||   
Sbjct: 2675 ttcttcctcgatcctccttctccatacaattcattccactgcttcaactctcccattccc 2616

                                                  
Query: 277  gaacctttagcagcaaaactcgccgccacctggttctt 314
            |  || | ||| |||||||||||||||||||| |||||
Sbjct: 2615 gctccctcagccgcaaaactcgccgccacctgattctt 2578
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>ref|NM_179511.1| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/
            nucleotide binding AT1G64110 transcript variant
            AT1G64110.2 mRNA, complete cds
          Length = 2886

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                        
Query: 217  ttcttcctcgagccgccttcaccatacaaattattccattgcttcaactcacccattatg 276
            ||||||||||| || ||||| |||||||| | |||||| ||||||||||| ||||||   
Sbjct: 2693 ttcttcctcgatcctccttctccatacaattcattccactgcttcaactctcccattccc 2634

                                                  
Query: 277  gaacctttagcagcaaaactcgccgccacctggttctt 314
            |  || | ||| |||||||||||||||||||| |||||
Sbjct: 2633 gctccctcagccgcaaaactcgccgccacctgattctt 2596
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>gb|AY056097.1| Arabidopsis thaliana At1g64110/F22C12_22 mRNA, complete cds
          Length = 2828

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                        
Query: 217  ttcttcctcgagccgccttcaccatacaaattattccattgcttcaactcacccattatg 276
            ||||||||||| || ||||| |||||||| | |||||| ||||||||||| ||||||   
Sbjct: 2675 ttcttcctcgatcctccttctccatacaattcattccactgcttcaactctcccattccc 2616

                                                  
Query: 277  gaacctttagcagcaaaactcgccgccacctggttctt 314
            |  || | ||| |||||||||||||||||||| |||||
Sbjct: 2615 gctccctcagccgcaaaactcgccgccacctgattctt 2578
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>gb|BT006360.1| Arabidopsis thaliana At1g64110/F22C12_22 gene, complete cds
          Length = 2475

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                        
Query: 217  ttcttcctcgagccgccttcaccatacaaattattccattgcttcaactcacccattatg 276
            ||||||||||| || ||||| |||||||| | |||||| ||||||||||| ||||||   
Sbjct: 2450 ttcttcctcgatcctccttctccatacaattcattccactgcttcaactctcccattccc 2391

                                                  
Query: 277  gaacctttagcagcaaaactcgccgccacctggttctt 314
            |  || | ||| |||||||||||||||||||| |||||
Sbjct: 2390 gctccctcagccgcaaaactcgccgccacctgattctt 2353
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>gb|AC007764.2|AC007764 Genomic sequence for Arabidopsis thaliana BAC F22C12 from chromosome I,
             complete sequence
          Length = 111222

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 77/92 (83%)
 Strand = Plus / Minus

                                                                         
Query: 217   ttcttcctcgagccgccttcaccatacaaattattccattgcttcaactcacccattatg 276
             ||||||||||| || ||||| |||||||| | |||||| ||||||||||| ||||||   
Sbjct: 53982 ttcttcctcgatcctccttctccatacaattcattccactgcttcaactctcccattccc 53923

                                             
Query: 277   gaacctttagcagcaaaactcgccgccacctg 308
             |  || | ||| ||||||||||||||||||||
Sbjct: 53922 gctccctcagccgcaaaactcgccgccacctg 53891
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>dbj|AB009055.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXC20
          Length = 81575

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 60/70 (85%)
 Strand = Plus / Plus

                                                                         
Query: 191   ttcagaggaagtatgtcaactgctccttcttcctcgagccgccttcaccatacaaattat 250
             |||| |||||||| || | ||| ||||| ||||| ||||| ||||| |||||||||| ||
Sbjct: 39210 ttcaaaggaagtaagtgagctgttcctttttccttgagcctccttctccatacaaatcat 39269

                       
Query: 251   tccattgctt 260
             ||||||||||
Sbjct: 39270 tccattgctt 39279
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>gb|AC150980.20| Medicago truncatula clone mth2-165j9, complete sequence
          Length = 119548

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                         
Query: 217    ttcttcctcgagccgccttcaccatacaaattattccattgct 259
              |||||||| || || ||||| ||||||||||||||||||||||
Sbjct: 119028 ttcttccttgaacctccttctccatacaaattattccattgct 118986
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>gb|AC148655.4| Medicago truncatula clone mth2-61c11, complete sequence
          Length = 89884

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 217   ttcttcctcgagccgccttcaccatacaaattattccattgct 259
             |||||||| || || ||||| ||||||||||||||||||||||
Sbjct: 85833 ttcttccttgaacctccttctccatacaaattattccattgct 85875
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>emb|AL080275.20|HSDJ149L1 Human DNA sequence from clone RP1-149L1 on chromosome 6q12-13 Contains
             the 5' end of the COL9A1 gene for collagen IX alpha 1 and
             a CpG island, complete sequence
          Length = 113983

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 117   aaagtaaccggcctattttctc 138
             ||||||||||||||||||||||
Sbjct: 16890 aaagtaaccggcctattttctc 16911
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>ref|NM_116481.2| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/
            nucleotide binding AT4G02480 mRNA, complete cds
          Length = 4287

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 216  cttcttcctcgagccgccttcaccataca 244
            |||||||||||| || |||||||||||||
Sbjct: 3940 cttcttcctcgatcctccttcaccataca 3912
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>gb|AY090948.1| Arabidopsis thaliana unknown protein (At4g02480) mRNA, complete cds
          Length = 4184

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 216  cttcttcctcgagccgccttcaccataca 244
            |||||||||||| || |||||||||||||
Sbjct: 3902 cttcttcctcgatcctccttcaccataca 3874
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>emb|AL161494.2|ATCHRIV6 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 6
          Length = 194892

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 216    cttcttcctcgagccgccttcaccataca 244
              |||||||||||| || |||||||||||||
Sbjct: 117756 cttcttcctcgatcctccttcaccataca 117784
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>gb|AC005146.1| Homo sapiens 12 PAC RP1-157K6 (Roswell Park Cancer Institute Human PAC
              Library) complete sequence
          Length = 157653

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 159    ctactttccaaattatgttcatacactta 187
              |||||||||||||||| |||| |||||||
Sbjct: 126479 ctactttccaaattatattcagacactta 126507
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>gb|AF069298.1|T14P8 Arabidopsis thaliana BAC T14P8
          Length = 94536

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 216   cttcttcctcgagccgccttcaccataca 244
             |||||||||||| || |||||||||||||
Sbjct: 28858 cttcttcctcgatcctccttcaccataca 28830
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>gb|AC120551.5| Mus musculus chromosome 1, clone RP24-338A22, complete sequence
          Length = 161994

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 232   ccttcaccatacaaattattccatt 256
             ||||||||| |||||||||||||||
Sbjct: 22799 ccttcaccaaacaaattattccatt 22775
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>gb|AC113121.27| Mus musculus chromosome 8, clone RP23-347G12, complete sequence
          Length = 192877

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 206    tcaactgctccttcttcctc 225
              ||||||||||||||||||||
Sbjct: 138665 tcaactgctccttcttcctc 138684
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>ref|XM_519962.1| PREDICTED: Pan troglodytes KIAA0143 protein (LOC464402), mRNA
          Length = 2244

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 273  tatggaacctttagcagcaa 292
            ||||||||||||||||||||
Sbjct: 1665 tatggaacctttagcagcaa 1646
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>gb|AC006794.3| Caenorhabditis elegans cosmid Y50D4A, complete sequence
          Length = 45292

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   tttcatgtgttttgacaaag 120
             ||||||||||||||||||||
Sbjct: 42279 tttcatgtgttttgacaaag 42298
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>gb|AC104613.2| Drosophila melanogaster clone BACR06K07, complete sequence
          Length = 152934

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    acaagtacaacaaccaaaca 64
             ||||||||||||||||||||
Sbjct: 86715 acaagtacaacaaccaaaca 86734
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>gb|AC147628.4| Mus musculus BAC clone RP24-476D20 from chromosome 14, complete
             sequence
          Length = 170642

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    ttattagtgtacaagtacaa 54
             ||||||||||||||||||||
Sbjct: 90792 ttattagtgtacaagtacaa 90773
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>ref|XM_615125.2| PREDICTED: Bos taurus similar to RIKEN cDNA C920006C10 (LOC535125),
           mRNA
          Length = 2942

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 273 tatggaacctttagcagcaa 292
           ||||||||||||||||||||
Sbjct: 534 tatggaacctttagcagcaa 515
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>gb|BC007482.1| Mus musculus RIKEN cDNA C920006C10 gene, mRNA (cDNA clone MGC:7643
            IMAGE:3495608), complete cds
          Length = 3980

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 273  tatggaacctttagcagcaa 292
            ||||||||||||||||||||
Sbjct: 1190 tatggaacctttagcagcaa 1171
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>gb|BC071611.1| Homo sapiens KIAA0143 protein, mRNA (cDNA clone IMAGE:5268464),
            partial cds
          Length = 5045

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 273  tatggaacctttagcagcaa 292
            ||||||||||||||||||||
Sbjct: 1192 tatggaacctttagcagcaa 1173
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 135     tctcgtagttgtttgccatctatt 158
               |||||||||||||||||| |||||
Sbjct: 1032994 tctcgtagttgtttgccaactatt 1033017
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>gb|AC091276.7| Mus musculus chromosome 15, clone RP23-167B4, complete sequence
          Length = 255663

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 273   tatggaacctttagcagcaa 292
             ||||||||||||||||||||
Sbjct: 92366 tatggaacctttagcagcaa 92347
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>gb|BC108667.1| Homo sapiens KIAA0143 protein, mRNA (cDNA clone IMAGE:6047676),
            partial cds
          Length = 1737

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 273  tatggaacctttagcagcaa 292
            ||||||||||||||||||||
Sbjct: 1183 tatggaacctttagcagcaa 1164
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>emb|AL355604.11| Human DNA sequence from clone RP11-404E6 on chromosome 9 Contains a
             pseudogene similar to part of dipeptidylpeptidase 3
             (DPP3), complete sequence
          Length = 183010

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 154   ctattctactttccaaattatgtt 177
             ||||||| ||||||||||||||||
Sbjct: 61083 ctattctcctttccaaattatgtt 61106
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>gb|AC164524.5| Mus musculus  BAC RP23-438F8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 180937

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      aaaggatctgctctgctctg 26
              ||||||||||||||||||||
Sbjct: 143079 aaaggatctgctctgctctg 143098
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>emb|CR749243.1| Homo sapiens mRNA; cDNA DKFZp781J0562 (from clone DKFZp781J0562)
          Length = 5149

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 273  tatggaacctttagcagcaa 292
            ||||||||||||||||||||
Sbjct: 1025 tatggaacctttagcagcaa 1006
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>gb|AC100868.2| Homo sapiens chromosome 8, clone RP11-246K8, complete sequence
          Length = 160939

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 273   tatggaacctttagcagcaa 292
             ||||||||||||||||||||
Sbjct: 30894 tatggaacctttagcagcaa 30875
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>gb|AC026596.9| Homo sapiens chromosome 8, clone RP11-380O15, complete sequence
          Length = 165158

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 273   tatggaacctttagcagcaa 292
             ||||||||||||||||||||
Sbjct: 88951 tatggaacctttagcagcaa 88932
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>dbj|D63477.1| Homo sapiens mRNA for KIAA0143 gene, partial cds
          Length = 5286

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 273  tatggaacctttagcagcaa 292
            ||||||||||||||||||||
Sbjct: 1183 tatggaacctttagcagcaa 1164
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>gb|AC092817.2| Homo sapiens chromosome 8, clone RP11-240B13, complete sequence
          Length = 168719

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 273   tatggaacctttagcagcaa 292
             ||||||||||||||||||||
Sbjct: 57344 tatggaacctttagcagcaa 57363
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>gb|AC013432.4| Drosophila melanogaster, chromosome X, region 15F-15F, BAC clone
             BACR01K05, complete sequence
          Length = 162761

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   tattctactttccaaattat 174
             ||||||||||||||||||||
Sbjct: 47451 tattctactttccaaattat 47470
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>dbj|AK161250.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4921524C03 product:Similar to conserved
            membrane protein AT 44E homolog, full insert sequence
          Length = 2947

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 273  tatggaacctttagcagcaa 292
            ||||||||||||||||||||
Sbjct: 1171 tatggaacctttagcagcaa 1152
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>dbj|AK018695.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
           full-length enriched library, clone:C920006C10
           product:SIMILAR TO CONSERVED MEMBRANE PROTEIN AT 44E
           homolog [Mus musculus], full insert sequence
          Length = 1626

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 273 tatggaacctttagcagcaa 292
           ||||||||||||||||||||
Sbjct: 406 tatggaacctttagcagcaa 387
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>gb|AC140489.2| Mus musculus BAC clone RP24-144C10 from chromosome 1, complete sequence
          Length = 194368

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 206   tcaactgctccttcttcctc 225
             ||||||||||||||||||||
Sbjct: 69390 tcaactgctccttcttcctc 69409
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>dbj|AK032461.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
            enriched library, clone:6430553G23 product:SIMILAR TO
            CONSERVED MEMBRANE PROTEIN AT 44E, full insert sequence
          Length = 3040

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 273  tatggaacctttagcagcaa 292
            ||||||||||||||||||||
Sbjct: 1159 tatggaacctttagcagcaa 1140
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>dbj|AK044475.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
            clone:A930015C05 product:SIMILAR TO CONSERVED MEMBRANE
            PROTEIN AT 44E homolog [Mus musculus], full insert
            sequence
          Length = 3614

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 273  tatggaacctttagcagcaa 292
            ||||||||||||||||||||
Sbjct: 1182 tatggaacctttagcagcaa 1163
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>dbj|AK044000.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched
            library, clone:A830080A01 product:SIMILAR TO CONSERVED
            MEMBRANE PROTEIN AT 44E homolog [Mus musculus], full
            insert sequence
          Length = 3855

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 273  tatggaacctttagcagcaa 292
            ||||||||||||||||||||
Sbjct: 1180 tatggaacctttagcagcaa 1161
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>dbj|AK030074.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4932434C18 product:SIMILAR TO CONSERVED
            MEMBRANE PROTEIN AT 44E homolog [Mus musculus], full
            insert sequence
          Length = 2849

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 273  tatggaacctttagcagcaa 292
            ||||||||||||||||||||
Sbjct: 1187 tatggaacctttagcagcaa 1168
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>gb|AC155657.8| Mus musculus 6 BAC RP24-113L15 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 159299

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      aaaggatctgctctgctctg 26
              ||||||||||||||||||||
Sbjct: 143905 aaaggatctgctctgctctg 143886
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>ref|NM_015137.1| Homo sapiens KIAA0143 protein (KIAA0143), mRNA
          Length = 5149

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 273  tatggaacctttagcagcaa 292
            ||||||||||||||||||||
Sbjct: 1025 tatggaacctttagcagcaa 1006
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>ref|NM_133766.2| Mus musculus RIKEN cDNA C920006C10 gene (C920006C10Rik), mRNA
          Length = 5225

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 273  tatggaacctttagcagcaa 292
            ||||||||||||||||||||
Sbjct: 1190 tatggaacctttagcagcaa 1171
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>gb|AC006517.46| Homo sapiens 12 BAC RP11-277J24 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 161504

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 245   aattattccattgcttcaactcac 268
             |||||||||||||||| |||||||
Sbjct: 19388 aattattccattgctttaactcac 19365
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>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 135     tctcgtagttgtttgccatctatt 158
               |||||||||||||||||| |||||
Sbjct: 3714131 tctcgtagttgtttgccaactatt 3714108
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>dbj|AB158474.1| Mus musculus KIAA0143 mRNA for similar to conserved membrane protein
            at 44E, complete cds
          Length = 5225

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 273  tatggaacctttagcagcaa 292
            ||||||||||||||||||||
Sbjct: 1190 tatggaacctttagcagcaa 1171
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>emb|AL929331.15| Zebrafish DNA sequence from clone DKEY-16O9, complete sequence
          Length = 221062

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   tactttccaaattatgttca 179
             ||||||||||||||||||||
Sbjct: 64240 tactttccaaattatgttca 64259
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>dbj|AK129065.1| Mus musculus mRNA for mKIAA0143 protein
          Length = 3941

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 273  tatggaacctttagcagcaa 292
            ||||||||||||||||||||
Sbjct: 1164 tatggaacctttagcagcaa 1145
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>gb|AC140070.3| Mus musculus BAC clone RP24-161L16 from 9, complete sequence
          Length = 168604

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    ctctgcagattcattattag 41
             ||||||||||||||||||||
Sbjct: 98501 ctctgcagattcattattag 98520
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>gb|AE003609.4| Drosophila melanogaster chromosome 2L, section 18 of 83 of the complete
             sequence
          Length = 319287

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    acaagtacaacaaccaaaca 64
             ||||||||||||||||||||
Sbjct: 29757 acaagtacaacaaccaaaca 29738
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>gb|AE003505.3| Drosophila melanogaster chromosome X, section 57 of 74 of the complete
              sequence
          Length = 314205

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 155    tattctactttccaaattat 174
              ||||||||||||||||||||
Sbjct: 118948 tattctactttccaaattat 118929
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>gb|AC005750.1|AC005750 Drosophila melanogaster DNA sequence (P1s DS03979 (D283) and DS01272
             (D284)), complete sequence
          Length = 102516

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    acaagtacaacaaccaaaca 64
             ||||||||||||||||||||
Sbjct: 34516 acaagtacaacaaccaaaca 34535
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>gb|BC032092.1| Mus musculus RIKEN cDNA C920006C10 gene, mRNA (cDNA clone
            IMAGE:3987833)
          Length = 3981

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 273  tatggaacctttagcagcaa 292
            ||||||||||||||||||||
Sbjct: 1191 tatggaacctttagcagcaa 1172
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>gb|L77738.1|SYNAEVRV Retroviral vector leader sequence
          Length = 557

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 218 tcttcctcgagccgccttca 237
           ||||||||||||||||||||
Sbjct: 473 tcttcctcgagccgccttca 454


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,132,735
Number of Sequences: 3902068
Number of extensions: 3132735
Number of successful extensions: 89259
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89115
Number of HSP's gapped (non-prelim): 144
length of query: 314
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 292
effective length of database: 17,147,199,772
effective search space: 5006982333424
effective search space used: 5006982333424
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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