Clone Name | rbastl41c07 |
---|---|
Clone Library Name | barley_pub |
>gb|AY483155.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA6) mRNA, complete cds Length = 3745 Score = 270 bits (136), Expect = 4e-69 Identities = 211/237 (89%), Gaps = 8/237 (3%) Strand = Plus / Minus Query: 209 tccgtcttcatctacaacaacaaaatcccatccaaccccctccggtatttacacgagggg 268 |||||||||||||||||| | |||||||| || ||||||||||||||||||||| ||||| Sbjct: 3518 tccgtcttcatctacaaccaaaaaatcccgtctaaccccctccggtatttacactagggg 3459 Query: 269 ggcagatactcttcggcgccgat--------cagcagttgacgccacactgccccatggc 320 ||||||||||| |||||||| |||||||||||||| |||||||||||||| Sbjct: 3458 ggcagatactcccgagcgccgatgatccgatcagcagttgacgccgcactgccccatggc 3399 Query: 321 gacggctttctgggtatcggatatgaaagggtcgatcttcacccacaggagggagaagat 380 ||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 3398 aacggccttctgggtatcggaaatgaaagggtcgatcttcacccagaggagggagaagat 3339 Query: 381 ggaggctaggaggatggaccaaacaatgacgatggttggcgtgcggttctgcttccc 437 |||||| |||||||| |||||||| ||||||||||| |||||||||||||||||||| Sbjct: 3338 ggaggcgaggaggatcgaccaaacgatgacgatggtcggcgtgcggttctgcttccc 3282 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Minus Query: 1 gatgcaacagctgccttatataaatagttggtgtcatagtgt 42 ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 3729 gatgcaacagctgccttatataaattgttggtgtcatagtgt 3688 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 128 tcacaatgtacgctgcaggtttcgtag 154 ||||||||||||||||||||||||||| Sbjct: 3606 tcacaatgtacgctgcaggtttcgtag 3580
>gb|DQ020207.1| Bambusa oldhamii cellulose synthase BoCesA1a mRNA, complete cds Length = 3547 Score = 188 bits (95), Expect = 1e-44 Identities = 131/143 (91%) Strand = Plus / Minus Query: 290 atcagcagttgacgccacactgccccatggcgacggctttctgggtatcggatatgaaag 349 |||||||||| || || |||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 3254 atcagcagttcacaccgcactgccccaaggcgacggctttctgggtaggggatatgaaag 3195 Query: 350 ggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaaacaatga 409 |||||||||||||||| |||||||||||||| || || ||||||||||||||||| |||| Sbjct: 3194 ggtcgatcttcacccagaggagggagaagattgacgcaaggaggatggaccaaacgatga 3135 Query: 410 cgatggttggcgtgcggttctgc 432 | ||||||||||||||||||||| Sbjct: 3134 caatggttggcgtgcggttctgc 3112 Score = 79.8 bits (40), Expect = 7e-12 Identities = 50/52 (96%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 213 tcttcatctacaacaacaaaatcccatccaaccccctccggtatttacacga 264 |||||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 3351 tcttcatctacaacaa-aaaatcccatccaaccccctcaggtatttacacga 3301 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 128 tcacaatgtacgctgcaggtttcgtaggc 156 ||||||| ||||||||||||||||||||| Sbjct: 3464 tcacaatttacgctgcaggtttcgtaggc 3436 Score = 40.1 bits (20), Expect = 5.9 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 69 ataatatactctaag-aagaaacaacaggtatcaca 103 ||||||||||||||| || | ||||||||||||||| Sbjct: 3510 ataatatactctaagcaatagacaacaggtatcaca 3475
>gb|DQ020208.1| Bambusa oldhamii cellulose synthase BoCesA1b mRNA, complete cds Length = 3453 Score = 180 bits (91), Expect = 3e-42 Identities = 133/147 (90%) Strand = Plus / Minus Query: 286 gccgatcagcagttgacgccacactgccccatggcgacggctttctgggtatcggatatg 345 |||||| ||||||| || || |||||||||| ||| ||||||||||| ||| ||||||| Sbjct: 3415 gccgattagcagttcacaccgcactgccccaaggcaacggctttctgagtaggggatatg 3356 Query: 346 aaagggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaaaca 405 ||||||||||||||||||||||| ||||||||||| || || |||||||||||||||||| Sbjct: 3355 aaagggtcgatcttcacccacagcagggagaagattgacgcgaggaggatggaccaaaca 3296 Query: 406 atgacgatggttggcgtgcggttctgc 432 ||||| ||||||||||||||||||||| Sbjct: 3295 atgacaatggttggcgtgcggttctgc 3269
>gb|DQ020210.1| Bambusa oldhamii cellulose synthase BoCesA3a mRNA, complete cds Length = 3571 Score = 161 bits (81), Expect = 2e-36 Identities = 126/141 (89%) Strand = Plus / Minus Query: 291 tcagcagttgacgccacactgccccatggcgacggctttctgggtatcggatatgaaagg 350 ||||||||| || || |||||||||| || |||||||||||||||| ||||||||||| Sbjct: 3304 tcagcagtttacaccgcactgccccagggtgacggctttctgggtaggagatatgaaagg 3245 Query: 351 gtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaaacaatgac 410 ||||||||||||||||| || ||||||||||| || ||||||||||||||||||||||| Sbjct: 3244 atcgatcttcacccacagcagtgagaagatggaagcaaggaggatggaccaaacaatgac 3185 Query: 411 gatggttggcgtgcggttctg 431 |||||||| ||||||||||| Sbjct: 3184 aatggttggagtgcggttctg 3164
>gb|DQ020216.1| Bambusa oldhamii cellulose synthase BoCesA3b mRNA, complete cds Length = 3707 Score = 137 bits (69), Expect = 3e-29 Identities = 123/141 (87%) Strand = Plus / Minus Query: 291 tcagcagttgacgccacactgccccatggcgacggctttctgggtatcggatatgaaagg 350 ||||||||| || || |||||||||| || ||| |||||||||||| ||||||||||| Sbjct: 3310 tcagcagtttacaccgcactgccccagggtgacagctttctgggtaggagatatgaaagg 3251 Query: 351 gtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaaacaatgac 410 ||||||||||||||||| || ||||||||||| || ||||||| ||||||||||||||| Sbjct: 3250 atcgatcttcacccacagcagtgagaagatggaagcaaggaggacggaccaaacaatgac 3191 Query: 411 gatggttggcgtgcggttctg 431 |||||||| ||||| ||||| Sbjct: 3190 aatggttggagtgcgattctg 3170
>gb|AF200526.1|AF200526 Zea mays cellulose synthase-2 (CesA-2) mRNA, complete cds Length = 3725 Score = 135 bits (68), Expect = 1e-28 Identities = 125/144 (86%) Strand = Plus / Minus Query: 289 gatcagcagttgacgccacactgccccatggcgacggctttctgggtatcggatatgaaa 348 ||||||||||| || ||||| ||||||| |||| | |||||||| || ||| |||||| Sbjct: 3405 gatcagcagttcacaccacattgccccaaggcggcagctttctgtgtcggggagatgaaa 3346 Query: 349 gggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaaacaatg 408 || ||||||||||||||||| | ||||||||| || || ||||||||||||||||| ||| Sbjct: 3345 ggatcgatcttcacccacagcaaggagaagatagacgcaaggaggatggaccaaacgatg 3286 Query: 409 acgatggttggcgtgcggttctgc 432 ||||| |||||||||||||||||| Sbjct: 3285 acgattgttggcgtgcggttctgc 3262 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 216 tcatctacaacaacaaaatcccatccaaccccctccggtatttacacgaggggg 269 ||||||||||||| ||| ||||||| | ||||||| |||||||||||||||||| Sbjct: 3501 tcatctacaacaaaaaattcccatctagccccctcaggtatttacacgaggggg 3448
>gb|AF200525.1|AF200525 Zea mays cellulose synthase-1 (CesA-1) mRNA, complete cds Length = 3752 Score = 135 bits (68), Expect = 1e-28 Identities = 135/156 (86%), Gaps = 1/156 (0%) Strand = Plus / Minus Query: 288 cgatcagcagttgacgccacactgccccatggcgacggctttctgggtatcggatatgaa 347 ||||||||||||||||||||| ||||||| ||| | |||||||| || ||| ||||| Sbjct: 3413 cgatcagcagttgacgccacattgccccaaggcagcagctttctgtgtcggggagatgaa 3354 Query: 348 agggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaaacaat 407 ||| ||||||||||||||||| | ||||||||| || || || ||||||||||| ||||| Sbjct: 3353 aggatcgatcttcacccacagcaaggagaagatagatgcaagaaggatggaccagacaat 3294 Query: 408 gacgatggttggcgtgcggttctg-cttcccatgag 442 |||||| ||||| ||||||||||| ||||||||||| Sbjct: 3293 gacgattgttggtgtgcggttctgccttcccatgag 3258 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 234 tcccatccaaccccctccggtatttacacgaggggg 269 ||||||| | || |||| |||||||||||||||||| Sbjct: 3489 tcccatctagcctcctcaggtatttacacgaggggg 3454
>gb|AY110415.1| Zea mays CL1166_1 mRNA sequence Length = 3898 Score = 135 bits (68), Expect = 1e-28 Identities = 135/156 (86%), Gaps = 1/156 (0%) Strand = Plus / Minus Query: 288 cgatcagcagttgacgccacactgccccatggcgacggctttctgggtatcggatatgaa 347 ||||||||||||||||||||| ||||||| ||| | |||||||| || ||| ||||| Sbjct: 3419 cgatcagcagttgacgccacattgccccaaggcagcagctttctgtgtcggggagatgaa 3360 Query: 348 agggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaaacaat 407 ||| ||||||||||||||||| | ||||||||| || || || ||||||||||| ||||| Sbjct: 3359 aggatcgatcttcacccacagcaaggagaagatagatgcaagaaggatggaccagacaat 3300 Query: 408 gacgatggttggcgtgcggttctg-cttcccatgag 442 |||||| ||||| ||||||||||| ||||||||||| Sbjct: 3299 gacgattgttggtgtgcggttctgccttcccatgag 3264
>gb|DQ020209.1| Bambusa oldhamii cellulose synthase BoCesA2 mRNA, complete cds Length = 3648 Score = 133 bits (67), Expect = 5e-28 Identities = 127/147 (86%) Strand = Plus / Minus Query: 291 tcagcagttgacgccacactgccccatggcgacggctttctgggtatcggatatgaaagg 350 ||||||||| || || |||||||||| ||| || |||||||||||| ||||||||||| Sbjct: 3325 tcagcagtttacaccgcactgccccaaggcaacagctttctgggtaggagatatgaaagg 3266 Query: 351 gtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaaacaatgac 410 ||||||||||||||||| | ||||||||||| || ||||||||||||||||||||||| Sbjct: 3265 atcgatcttcacccacagcaacgagaagatggaagcaaggaggatggaccaaacaatgac 3206 Query: 411 gatggttggcgtgcggttctgcttccc 437 || || || ||||||||||| ||||| Sbjct: 3205 aattgtcggtgtgcggttctgtttccc 3179 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 227 aacaaaatcccatccaaccccctccggtatttacacgagggggg 270 ||||||||| |||| |||| |||| ||||||||||||||||||| Sbjct: 3420 aacaaaatcacatctaaccacctctggtatttacacgagggggg 3377
>gb|AC135426.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617A08, complete sequence Length = 144781 Score = 125 bits (63), Expect = 1e-25 Identities = 126/147 (85%) Strand = Plus / Plus Query: 286 gccgatcagcagttgacgccacactgccccatggcgacggctttctgggtatcggatatg 345 |||||||||||||| || || || ||||||| ||||||||||||||| ||| || ||| Sbjct: 128286 gccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatg 128345 Query: 346 aaagggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaaaca 405 ||||| |||||||| |||||||| ||||||||||| || || |||||||| ||||| || Sbjct: 128346 aaaggatcgatcttgacccacagaagggagaagatcgacgcgaggaggatcgaccagacg 128405 Query: 406 atgacgatggttggcgtgcggttctgc 432 ||||||||||| || |||||||||||| Sbjct: 128406 atgacgatggtcggagtgcggttctgc 128432
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 125 bits (63), Expect = 1e-25 Identities = 126/147 (85%) Strand = Plus / Plus Query: 286 gccgatcagcagttgacgccacactgccccatggcgacggctttctgggtatcggatatg 345 |||||||||||||| || || || ||||||| ||||||||||||||| ||| || ||| Sbjct: 17129 gccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatg 17188 Query: 346 aaagggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaaaca 405 ||||| |||||||| |||||||| ||||||||||| || || |||||||| ||||| || Sbjct: 17189 aaaggatcgatcttgacccacagaagggagaagatcgacgcgaggaggatcgaccagacg 17248 Query: 406 atgacgatggttggcgtgcggttctgc 432 ||||||||||| || |||||||||||| Sbjct: 17249 atgacgatggtcggagtgcggttctgc 17275
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 125 bits (63), Expect = 1e-25 Identities = 126/147 (85%) Strand = Plus / Plus Query: 286 gccgatcagcagttgacgccacactgccccatggcgacggctttctgggtatcggatatg 345 |||||||||||||| || || || ||||||| ||||||||||||||| ||| || ||| Sbjct: 4506662 gccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatg 4506721 Query: 346 aaagggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaaaca 405 ||||| |||||||| |||||||| ||||||||||| || || |||||||| ||||| || Sbjct: 4506722 aaaggatcgatcttgacccacagaagggagaagatcgacgcgaggaggatcgaccagacg 4506781 Query: 406 atgacgatggttggcgtgcggttctgc 432 ||||||||||| || |||||||||||| Sbjct: 4506782 atgacgatggtcggagtgcggttctgc 4506808
>dbj|AK102140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085K01, full insert sequence Length = 3768 Score = 125 bits (63), Expect = 1e-25 Identities = 126/147 (85%) Strand = Plus / Minus Query: 286 gccgatcagcagttgacgccacactgccccatggcgacggctttctgggtatcggatatg 345 |||||||||||||| || || || ||||||| ||||||||||||||| ||| || ||| Sbjct: 3422 gccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatg 3363 Query: 346 aaagggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaaaca 405 ||||| |||||||| |||||||| ||||||||||| || || |||||||| ||||| || Sbjct: 3362 aaaggatcgatcttgacccacagaagggagaagatcgacgcgaggaggatcgaccagacg 3303 Query: 406 atgacgatggttggcgtgcggttctgc 432 ||||||||||| || |||||||||||| Sbjct: 3302 atgacgatggtcggagtgcggttctgc 3276
>dbj|AK100188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034D20, full insert sequence Length = 3897 Score = 125 bits (63), Expect = 1e-25 Identities = 126/147 (85%) Strand = Plus / Minus Query: 286 gccgatcagcagttgacgccacactgccccatggcgacggctttctgggtatcggatatg 345 |||||||||||||| || || || ||||||| ||||||||||||||| ||| || ||| Sbjct: 3422 gccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatg 3363 Query: 346 aaagggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaaaca 405 ||||| |||||||| |||||||| ||||||||||| || || |||||||| ||||| || Sbjct: 3362 aaaggatcgatcttgacccacagaagggagaagatcgacgcgaggaggatcgaccagacg 3303 Query: 406 atgacgatggttggcgtgcggttctgc 432 ||||||||||| || |||||||||||| Sbjct: 3302 atgacgatggtcggagtgcggttctgc 3276
>dbj|AK099281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125F05, full insert sequence Length = 3801 Score = 125 bits (63), Expect = 1e-25 Identities = 126/147 (85%) Strand = Plus / Minus Query: 286 gccgatcagcagttgacgccacactgccccatggcgacggctttctgggtatcggatatg 345 |||||||||||||| || || || ||||||| ||||||||||||||| ||| || ||| Sbjct: 3422 gccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatg 3363 Query: 346 aaagggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaaaca 405 ||||| |||||||| |||||||| ||||||||||| || || |||||||| ||||| || Sbjct: 3362 aaaggatcgatcttgacccacagaagggagaagatcgacgcgaggaggatcgaccagacg 3303 Query: 406 atgacgatggttggcgtgcggttctgc 432 ||||||||||| || |||||||||||| Sbjct: 3302 atgacgatggtcggagtgcggttctgc 3276
>dbj|AK099228.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091P03, full insert sequence Length = 3732 Score = 125 bits (63), Expect = 1e-25 Identities = 126/147 (85%) Strand = Plus / Minus Query: 286 gccgatcagcagttgacgccacactgccccatggcgacggctttctgggtatcggatatg 345 |||||||||||||| || || || ||||||| ||||||||||||||| ||| || ||| Sbjct: 3422 gccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatg 3363 Query: 346 aaagggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaaaca 405 ||||| |||||||| |||||||| ||||||||||| || || |||||||| ||||| || Sbjct: 3362 aaaggatcgatcttgacccacagaagggagaagatcgacgcgaggaggatcgaccagacg 3303 Query: 406 atgacgatggttggcgtgcggttctgc 432 ||||||||||| || |||||||||||| Sbjct: 3302 atgacgatggtcggagtgcggttctgc 3276
>dbj|AK098978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092B06, full insert sequence Length = 3764 Score = 125 bits (63), Expect = 1e-25 Identities = 126/147 (85%) Strand = Plus / Minus Query: 286 gccgatcagcagttgacgccacactgccccatggcgacggctttctgggtatcggatatg 345 |||||||||||||| || || || ||||||| ||||||||||||||| ||| || ||| Sbjct: 3422 gccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatg 3363 Query: 346 aaagggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaaaca 405 ||||| |||||||| |||||||| ||||||||||| || || |||||||| ||||| || Sbjct: 3362 aaaggatcgatcttgacccacagaagggagaagatcgacgcgaggaggatcgaccagacg 3303 Query: 406 atgacgatggttggcgtgcggttctgc 432 ||||||||||| || |||||||||||| Sbjct: 3302 atgacgatggtcggagtgcggttctgc 3276
>dbj|AK067967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013125H24, full insert sequence Length = 3802 Score = 125 bits (63), Expect = 1e-25 Identities = 126/147 (85%) Strand = Plus / Minus Query: 286 gccgatcagcagttgacgccacactgccccatggcgacggctttctgggtatcggatatg 345 |||||||||||||| || || || ||||||| ||||||||||||||| ||| || ||| Sbjct: 3422 gccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatg 3363 Query: 346 aaagggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaaaca 405 ||||| |||||||| |||||||| ||||||||||| || || |||||||| ||||| || Sbjct: 3362 aaaggatcgatcttgacccacagaagggagaagatcgacgcgaggaggatcgaccagacg 3303 Query: 406 atgacgatggttggcgtgcggttctgc 432 ||||||||||| || |||||||||||| Sbjct: 3302 atgacgatggtcggagtgcggttctgc 3276
>dbj|AK060838.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D02, full insert sequence Length = 1426 Score = 125 bits (63), Expect = 1e-25 Identities = 126/147 (85%) Strand = Plus / Minus Query: 286 gccgatcagcagttgacgccacactgccccatggcgacggctttctgggtatcggatatg 345 |||||||||||||| || || || ||||||| ||||||||||||||| ||| || ||| Sbjct: 1099 gccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatg 1040 Query: 346 aaagggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaaaca 405 ||||| |||||||| |||||||| ||||||||||| || || |||||||| ||||| || Sbjct: 1039 aaaggatcgatcttgacccacagaagggagaagatcgacgcgaggaggatcgaccagacg 980 Query: 406 atgacgatggttggcgtgcggttctgc 432 ||||||||||| || |||||||||||| Sbjct: 979 atgacgatggtcggagtgcggttctgc 953
>dbj|AK060079.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-C08, full insert sequence Length = 1097 Score = 125 bits (63), Expect = 1e-25 Identities = 126/147 (85%) Strand = Plus / Minus Query: 286 gccgatcagcagttgacgccacactgccccatggcgacggctttctgggtatcggatatg 345 |||||||||||||| || || || ||||||| ||||||||||||||| ||| || ||| Sbjct: 673 gccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatg 614 Query: 346 aaagggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaaaca 405 ||||| |||||||| |||||||| ||||||||||| || || |||||||| ||||| || Sbjct: 613 aaaggatcgatcttgacccacagaagggagaagatcgacgcgaggaggatcgaccagacg 554 Query: 406 atgacgatggttggcgtgcggttctgc 432 ||||||||||| || |||||||||||| Sbjct: 553 atgacgatggtcggagtgcggttctgc 527
>gb|AY104236.1| Zea mays PCO121439 mRNA sequence Length = 2872 Score = 123 bits (62), Expect = 5e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 328 ttctgggtatcggatatgaaagggtcgatcttcacccacaggagggagaagatggaggct 387 ||||||||| ||||||||| |||||||||||||||||||| || ||||| ||||| || Sbjct: 2451 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 2392 Query: 388 aggaggatggaccaaacaatgacgatggttggcgtgcggttctgcttccc 437 || |||| ||||||||||||||||||||| || ||||||||||||||||| Sbjct: 2391 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccc 2342
>gb|AF200527.1|AF200527 Zea mays cellulose synthase-3 (CesA-3) mRNA, partial cds Length = 2828 Score = 115 bits (58), Expect = 1e-22 Identities = 97/110 (88%) Strand = Plus / Minus Query: 328 ttctgggtatcggatatgaaagggtcgatcttcacccacaggagggagaagatggaggct 387 ||||||||| ||||||||| |||||||||||||||||||| || ||||| ||||| || Sbjct: 2429 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 2370 Query: 388 aggaggatggaccaaacaatgacgatggttggcgtgcggttctgcttccc 437 || |||| ||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 2369 agaaggacggaccaaacgatgacgatggtcggtgtgcggttctgcttccc 2320
>gb|AY372245.1| Zea mays cellulose synthase catalytic subunit 11 (CesA11) mRNA, complete cds Length = 3231 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 349 gggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaaacaatg 408 ||||||||||| ||||||||||||||||||| |||||| ||||||| |||||| | | Sbjct: 2914 gggtcgatcttgacccacaggagggagaagacggaggcgaggaggacggaccagagcacc 2855 Query: 409 acgatggttggcgtgcggttctg 431 |||||||| |||||||||||||| Sbjct: 2854 acgatggtcggcgtgcggttctg 2832
>gb|AY106476.1| Zea mays PCO143801 mRNA sequence Length = 833 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 349 gggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaaacaatg 408 ||||||||||| ||||||||||||||||||| |||||| ||||||| |||||| | | Sbjct: 517 gggtcgatcttgacccacaggagggagaagacggaggcgaggaggacggaccagagcacc 458 Query: 409 acgatggttggcgtgcggttctg 431 |||||||| |||||||||||||| Sbjct: 457 acgatggtcggcgtgcggttctg 435
>ref|NM_196933.1| Oryza sativa (japonica cultivar-group) putative cellulose synthase (OSJNBa0006L06.10), mRNA Length = 3408 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 343 atgaaagggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaa 402 ||||| ||||||||| | ||||| | |||||||||||||||||| |||||||||||||| Sbjct: 3143 atgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggaccag 3084 Query: 403 acaatgacgatggttggcgtgcggttctgcttccc 437 | | ||| ||||| ||||| ||||||||| |||| Sbjct: 3083 agcacgacaatggtgggcgtccggttctgcctccc 3049
>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete sequence Length = 162339 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 343 atgaaagggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaa 402 ||||| ||||||||| | ||||| | |||||||||||||||||| |||||||||||||| Sbjct: 95863 atgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggaccag 95804 Query: 403 acaatgacgatggttggcgtgcggttctgcttccc 437 | | ||| ||||| ||||| ||||||||| |||| Sbjct: 95803 agcacgacaatggtgggcgtccggttctgcctccc 95769
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 343 atgaaagggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaa 402 ||||| ||||||||| | ||||| | |||||||||||||||||| |||||||||||||| Sbjct: 16751346 atgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggaccag 16751287 Query: 403 acaatgacgatggttggcgtgcggttctgcttccc 437 | | ||| ||||| ||||| ||||||||| |||| Sbjct: 16751286 agcacgacaatggtgggcgtccggttctgcctccc 16751252
>dbj|AK120265.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047D23, full insert sequence Length = 612 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 343 atgaaagggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaa 402 ||||| ||||||||| | ||||| | |||||||||||||||||| |||||||||||||| Sbjct: 402 atgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggaccag 343 Query: 403 acaatgacgatggttggcgtgcggttctgcttccc 437 | | ||| ||||| ||||| ||||||||| |||| Sbjct: 342 agcacgacaatggtgggcgtccggttctgcctccc 308
>dbj|AK072259.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009D02, full insert sequence Length = 3426 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 343 atgaaagggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaa 402 ||||| ||||||||| | ||||| | |||||||||||||||||| |||||||||||||| Sbjct: 3176 atgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggaccag 3117 Query: 403 acaatgacgatggttggcgtgcggttctgcttccc 437 | | ||| ||||| ||||| ||||||||| |||| Sbjct: 3116 agcacgacaatggtgggcgtccggttctgcctccc 3082
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 343 atgaaagggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaa 402 ||||| ||||||||| | ||||| | |||||||||||||||||| |||||||||||||| Sbjct: 16760386 atgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggaccag 16760327 Query: 403 acaatgacgatggttggcgtgcggttctgcttccc 437 | | ||| ||||| ||||| ||||||||| |||| Sbjct: 16760326 agcacgacaatggtgggcgtccggttctgcctccc 16760292
>gb|AY372244.1| Zea mays cellulose synthase catalytic subunit 10 (CesA10) mRNA, complete cds Length = 3470 Score = 73.8 bits (37), Expect = 4e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 349 gggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaaacaatg 408 ||||||||| | ||||| | ||| |||||||||||||| |||||||||||||| | | | Sbjct: 3210 gggtcgatcctgacccagacgagcgagaagatggaggcgaggaggatggaccagagcacg 3151 Query: 409 acgatggttggcgtgcggttctgcttccc 437 |||||||| ||||| ||||||||| |||| Sbjct: 3150 acgatggtgggcgtccggttctgcctccc 3122
>gb|AY107656.1| Zea mays PCO126464 mRNA sequence Length = 1189 Score = 73.8 bits (37), Expect = 4e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 349 gggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaaacaatg 408 ||||||||| | ||||| | ||| |||||||||||||| |||||||||||||| | | | Sbjct: 909 gggtcgatcctgacccagacgagcgagaagatggaggcgaggaggatggaccagagcacg 850 Query: 409 acgatggttggcgtgcggttctgcttccc 437 |||||||| ||||| ||||||||| |||| Sbjct: 849 acgatggtgggcgtccggttctgcctccc 821
>ref|NM_191233.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2820 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 343 atgaaagggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaa 402 ||||| ||||||||||| ||||| ||||||||||||| |||||| || |||| ||||| Sbjct: 2768 atgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagaccag 2709 Query: 403 acaatgacgatggttggcgtgcggttctg 431 | | ||||||||| ||||| |||||||| Sbjct: 2708 agcacgacgatggtgggcgtccggttctg 2680
>gb|BT019129.1| Zea mays clone Contig756.F mRNA sequence Length = 754 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 361 acccacaggagggagaagatggaggctaggaggatggaccaaacaatgacgatggttggc 420 ||||||||||| |||||||| ||||| || ||||||||||| || |||||||| || ||| Sbjct: 485 acccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcggc 426 Query: 421 gtgcggttctgcttccc 437 || | ||||||| |||| Sbjct: 425 gtcctgttctgcctccc 409
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 343 atgaaagggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaa 402 ||||| ||||||||||| ||||| ||||||||||||| |||||| || |||| ||||| Sbjct: 31421516 atgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagaccag 31421457 Query: 403 acaatgacgatggttggcgtgcggttctg 431 | | ||||||||| ||||| |||||||| Sbjct: 31421456 agcacgacgatggtgggcgtccggttctg 31421428
>dbj|AP003237.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0046E05 Length = 162776 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 343 atgaaagggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaa 402 ||||| ||||||||||| ||||| ||||||||||||| |||||| || |||| ||||| Sbjct: 15580 atgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagaccag 15521 Query: 403 acaatgacgatggttggcgtgcggttctg 431 | | ||||||||| ||||| |||||||| Sbjct: 15520 agcacgacgatggtgggcgtccggttctg 15492
>gb|AF200532.1|AF200532 Zea mays cellulose synthase-8 (CesA-8) mRNA, complete cds Length = 3812 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 361 acccacaggagggagaagatggaggctaggaggatggaccaaacaatgacgatggttggc 420 ||||||||||| |||||||| ||||| || ||||||||||| || |||||||| || ||| Sbjct: 3428 acccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcggc 3369 Query: 421 gtgcggttctgcttccc 437 || | ||||||| |||| Sbjct: 3368 gtcctgttctgcctccc 3352
>dbj|AK105078.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-G07, full insert sequence Length = 1504 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 343 atgaaagggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaa 402 ||||| ||||||||||| ||||| ||||||||||||| |||||| || |||| ||||| Sbjct: 1162 atgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagaccag 1103 Query: 403 acaatgacgatggttggcgtgcggttctg 431 | | ||||||||| ||||| |||||||| Sbjct: 1102 agcacgacgatggtgggcgtccggttctg 1074
>dbj|AK100475.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093O20, full insert sequence Length = 3462 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 343 atgaaagggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaa 402 ||||| ||||||||||| ||||| ||||||||||||| |||||| || |||| ||||| Sbjct: 3050 atgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagaccag 2991 Query: 403 acaatgacgatggttggcgtgcggttctg 431 | | ||||||||| ||||| |||||||| Sbjct: 2990 agcacgacgatggtgggcgtccggttctg 2962
>dbj|AK100374.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084J22, full insert sequence Length = 2024 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 343 atgaaagggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaa 402 ||||| ||||||||||| ||||| ||||||||||||| |||||| || |||| ||||| Sbjct: 1616 atgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagaccag 1557 Query: 403 acaatgacgatggttggcgtgcggttctg 431 | | ||||||||| ||||| |||||||| Sbjct: 1556 agcacgacgatggtgggcgtccggttctg 1528
>gb|AY103701.1| Zea mays PCO120363 mRNA sequence Length = 3788 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 361 acccacaggagggagaagatggaggctaggaggatggaccaaacaatgacgatggttggc 420 ||||||||||| |||||||| ||||| || ||||||||||| || |||||||| || ||| Sbjct: 3413 acccacaggagcgagaagatcgaggccagcaggatggaccagacgatgacgatcgtcggc 3354 Query: 421 gtgcggttctgcttccc 437 || | ||||||| |||| Sbjct: 3353 gtcctgttctgcctccc 3337
>gb|AY633545.1| Physcomitrella patens cellulose synthase catalytic subunit (CesA5) gene, partial cds Length = 2345 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 361 acccacaggagggagaagatggaggctaggaggatggaccaaacaatgacgatggttggc 420 ||||||||||| |||||||||||||| || || |||||||| || || || ||||| ||| Sbjct: 2341 acccacaggagagagaagatggaggcgagcagaatggaccacacgatcacaatggtaggc 2282 Query: 421 gtgcggttctgc 432 || ||||||||| Sbjct: 2281 gttcggttctgc 2270
>gb|AY483153.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA5) mRNA, partial cds Length = 2814 Score = 63.9 bits (32), Expect = 4e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 349 gggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaaacaatg 408 ||||||||||| ||||| ||||||||||||| ||||| || |||| |||||| | ||| Sbjct: 2579 gggtcgatcttgacccagaggagggagaagaccgaggccagcaggacggaccagagtatg 2520 Query: 409 acgatggttggcgtgcggttctgc 432 |||||||| || || ||||||||| Sbjct: 2519 acgatggtgggagtccggttctgc 2496
>gb|DQ014508.1| Eucalyptus grandis cellulose synthase 4 (CesA4) mRNA, complete cds Length = 3782 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 360 cacccacaggagggagaagatggaggctaggaggatggaccaaacaatgacgatggttgg 419 ||||||||| || ||||| ||||| ||||||||||| |||||||||| || |||||||| Sbjct: 3355 cacccacagaagtgagaaaatggatgctaggaggatcgaccaaacaactacaatggttgg 3296 Query: 420 cgtgcggttctg 431 ||||| ||||| Sbjct: 3295 tgtgcgtttctg 3284
>gb|AY372246.1| Zea mays cellulose synthase catalytic subunit 12 (CesA12) mRNA, complete cds Length = 3443 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 343 atgaaagggtcgatcttcacccacaggagggagaagatggaggctaggaggatggacca 401 ||||||||||||||| | ||||| || ||||||||||||||||| || || |||||||| Sbjct: 3201 atgaaagggtcgatcctgacccagagcagggagaagatggaggccagcagaatggacca 3143
>gb|AF200530.1|AF200530 Zea mays cellulose synthase-6 (CesA-6) mRNA, complete cds Length = 3538 Score = 60.0 bits (30), Expect = 6e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 373 gagaagatggaggctaggaggatggaccaaacaatgacgatggttggcgtgcggttctgc 432 |||||||| || || |||||||||||||| |||||||| || |||||||| | ||||||| Sbjct: 3140 gagaagatcgaagccaggaggatggaccagacaatgacaatcgttggcgtcctgttctgc 3081 Query: 433 ttccca 438 ||||| Sbjct: 3080 ctccca 3075
>gb|AY104730.1| Zea mays PCO100501 mRNA sequence Length = 3783 Score = 60.0 bits (30), Expect = 6e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 373 gagaagatggaggctaggaggatggaccaaacaatgacgatggttggcgtgcggttctgc 432 |||||||| || || |||||||||||||| |||||||| || |||||||| | ||||||| Sbjct: 3373 gagaagatcgaagccaggaggatggaccagacaatgacaatcgttggcgtcctgttctgc 3314 Query: 433 ttccca 438 ||||| Sbjct: 3313 ctccca 3308
>gb|BT019277.1| Zea mays clone Contig950.F mRNA sequence Length = 789 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 361 acccacaggagggagaagatggaggctaggaggatggaccaaacaatgacgatggttggc 420 ||||||| ||||| ||||| || || |||||||| | ||| |||| ||| ||||| ||| Sbjct: 261 acccacatcagggaaaagatcgacgcaaggaggatagcccagacaacgacaatggtcggc 320 Query: 421 gtgcggttctgcttccc 437 ||||||||||||||||| Sbjct: 321 gtgcggttctgcttccc 337
>gb|BT019010.1| Zea mays clone Contig501.F mRNA sequence Length = 1532 Score = 58.0 bits (29), Expect = 3e-05 Identities = 123/153 (80%), Gaps = 1/153 (0%) Strand = Plus / Minus Query: 290 atcagcagttgacgccacactgccccatggcgacggctttctgggtatcggatatgaaag 349 ||||||||||||| ||||| ||||||| || | ||||| || || ||| ||||||| Sbjct: 1087 atcagcagttgaccccacattgccccaagggagcagctttttgtgtcggggagatgaaag 1028 Query: 350 ggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaaacaatga 409 | ||||||||| ||| | | | ||| || || || || || |||||||||| |||||||| Sbjct: 1027 gatcgatcttccccccccgcaaggaaaaaatagatgcaagaaggatggacccaacaatga 968 Query: 410 cgatggttggcgtgcggttctg-cttcccatga 441 | || ||||| ||||||||||| |||||||||| Sbjct: 967 ccattgttggggtgcggttctgccttcccatga 935
>gb|AF200529.1|AF200529 Zea mays cellulose synthase-5 (CesA-5) mRNA, complete cds Length = 3676 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 361 acccacaggagggagaagatggaggctaggaggatggaccaaacaatgacgatggttggc 420 ||||||| ||||| ||||| || || |||||||| | ||| |||| ||| ||||| ||| Sbjct: 3417 acccacatcagggaaaagatcgacgcaaggaggatagcccagacaacgacaatggtcggc 3358 Query: 421 gtgcggttctgcttccc 437 ||||||||||||||||| Sbjct: 3357 gtgcggttctgcttccc 3341
>gb|AY110079.1| Zea mays CL1164_1 mRNA sequence Length = 3696 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 361 acccacaggagggagaagatggaggctaggaggatggaccaaacaatgacgatggttggc 420 ||||||| ||||| ||||| || || |||||||| | ||| |||| ||| ||||| ||| Sbjct: 3417 acccacatcagggaaaagatcgacgcaaggaggatagcccagacaacgacaatggtcggc 3358 Query: 421 gtgcggttctgcttccc 437 ||||||||||||||||| Sbjct: 3357 gtgcggttctgcttccc 3341
>gb|AY483151.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA3) mRNA, partial cds Length = 3362 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 361 acccacaggagggagaagatggaggctaggaggatggaccaaacaatgacgatggttggc 420 |||||||| | |||||||||||| || || ||||||| ||| || | |||||||| ||| Sbjct: 3089 acccacagcaaggagaagatggatgcaagaaggatggcccagacgacaacgatggtcggc 3030 Query: 421 gtgcggttctgc 432 |||||||||||| Sbjct: 3029 gtgcggttctgc 3018
>gb|AF200528.1|AF200528 Zea mays cellulose synthase-4 (CesA-4) mRNA, complete cds Length = 3745 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 361 acccacaggagggagaagatggaggctaggaggatggaccaaacaatgacgatggttggc 420 |||||||| | |||||||||||| || || ||||||| ||| || | ||||||||| || Sbjct: 3486 acccacagcaaggagaagatggacgccagcaggatggcccagacgacgacgatggtcggg 3427 Query: 421 gtgcggttctgc 432 |||||||||||| Sbjct: 3426 gtgcggttctgc 3415
>gb|AY108113.1| Zea mays PCO126465 mRNA sequence Length = 3763 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 361 acccacaggagggagaagatggaggctaggaggatggaccaaacaatgacgatggttggc 420 |||||||| | |||||||||||| || || ||||||| ||| || | ||||||||| || Sbjct: 3504 acccacagcaaggagaagatggacgccagcaggatggcccagacgacgacgatggtcggg 3445 Query: 421 gtgcggttctgc 432 |||||||||||| Sbjct: 3444 gtgcggttctgc 3433
>gb|AY483154.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA4) mRNA, partial cds Length = 1819 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 343 atgaaagggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaa 402 ||||| ||||||||| | ||||||| ||||||||||||||||| || |||| ||||| Sbjct: 1574 atgaaggggtcgatcctgacccacacaagggagaagatggaggcgagcaggacagaccag 1515 Query: 403 acaatgacgatggttggcgtgcggttctgcttccc 437 | | |||||||| ||||| ||||||||| |||| Sbjct: 1514 agcacaacgatggtgggcgtccggttctgcctccc 1480
>gb|AY483156.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA8) mRNA, partial cds Length = 1255 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Minus Query: 344 tgaaagggtcgatcttcacccacaggagggagaagatggaggctaggaggatggaccaaa 403 |||| ||||||||| | ||||| || |||||||| ||||||||||| || | |||||| | Sbjct: 1040 tgaaggggtcgatcctgacccaaagcagggagaacatggaggctagcagcacggaccata 981 Query: 404 caatgacgatggttggcgtgcggttctgcttccc 437 ||||| ||||| ||||| | ||||||| |||| Sbjct: 980 tgatgacaatggtgggcgtcctgttctgcctccc 947
>emb|CT009508.6| M.truncatula DNA sequence from clone MTH2-76H16 on chromosome 3, complete sequence Length = 133910 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 394 atggaccaaacaatgacgatggttggcgtgcggttctg 431 ||||||||||||| |||||||||||||| |||||||| Sbjct: 129727 atggaccaaacaaccacgatggttggcgttcggttctg 129690
>gb|AC149572.14| Medicago truncatula clone mth2-116e22, complete sequence Length = 120017 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 394 atggaccaaacaatgacgatggttggcgtgcggttctg 431 ||||||||||||| |||||||||||||| |||||||| Sbjct: 93749 atggaccaaacaaccacgatggttggcgttcggttctg 93712
>gb|DQ020214.1| Bambusa oldhamii cellulose synthase BoCesA6 mRNA, partial cds Length = 2867 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 361 acccacaggagggagaagatggaggctaggaggatggaccaaacaatgacgatggttggc 420 ||||| ||||| |||||||| || || || || |||||||| ||||||||||| |||||| Sbjct: 2494 acccagaggagtgagaagattgaagccagaagaatggaccagacaatgacgattgttggc 2435 Query: 421 gt 422 || Sbjct: 2434 gt 2433
>gb|AY389728.1| Hyacinthus orientalis cellulose synthase protein mRNA, partial cds Length = 782 Score = 50.1 bits (25), Expect = 0.006 Identities = 55/65 (84%) Strand = Plus / Minus Query: 373 gagaagatggaggctaggaggatggaccaaacaatgacgatggttggcgtgcggttctgc 432 ||||||||||| || |||||||| ||||| |||| || ||||| || |||||||||||| Sbjct: 639 gagaagatggaagccaggaggatcgaccagacaaccacaatggtcggagtgcggttctgc 580 Query: 433 ttccc 437 |||| Sbjct: 579 ctccc 575
>gb|DQ124074.1| Coffea arabica clone MN-SSH3-C06 mRNA sequence Length = 241 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 372 ggagaagatggaggctaggaggatggaccaaacaatgacgatggt 416 |||||||||||| || ||||| |||||||| |||||||| ||||| Sbjct: 189 ggagaagatggatgcaaggagtatggaccagacaatgacaatggt 233
>ref|NM_119393.2| Arabidopsis thaliana CESA1 (CELLULASE SYNTHASE 1); transferase, transferring glycosyl groups AT4G32410 (CESA1) mRNA, complete cds Length = 3912 Score = 48.1 bits (24), Expect = 0.024 Identities = 48/56 (85%) Strand = Plus / Minus Query: 373 gagaagatggaggctaggaggatggaccaaacaatgacgatggttggcgtgcggtt 428 |||||||||||||| || || | ||||| ||||||||||||||||| || ||||| Sbjct: 3441 gagaagatggaggcgagaagaacagaccagacaatgacgatggttggtgttcggtt 3386
>gb|BT018125.1| Zea mays clone EL01N0554C08.c mRNA sequence Length = 1450 Score = 48.1 bits (24), Expect = 0.024 Identities = 60/72 (83%) Strand = Plus / Minus Query: 361 acccacaggagggagaagatggaggctaggaggatggaccaaacaatgacgatggttggc 420 |||||||| | ||||||||| || || || ||||| | |||||||| |||||||| || Sbjct: 1195 acccacagcaaggagaagatcgacgccagcaggatcgcccaaacaaccacgatggtcggg 1136 Query: 421 gtgcggttctgc 432 |||||||||||| Sbjct: 1135 gtgcggttctgc 1124
>gb|AC158909.6| Mus musculus chromosome 1, clone RP23-118K4, complete sequence Length = 218810 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 220 ctacaacaacaaaatcccatccaa 243 |||||||||||||||||||||||| Sbjct: 118438 ctacaacaacaaaatcccatccaa 118461
>emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 77 Length = 197252 Score = 48.1 bits (24), Expect = 0.024 Identities = 48/56 (85%) Strand = Plus / Plus Query: 373 gagaagatggaggctaggaggatggaccaaacaatgacgatggttggcgtgcggtt 428 |||||||||||||| || || | ||||| ||||||||||||||||| || ||||| Sbjct: 55100 gagaagatggaggcgagaagaacagaccagacaatgacgatggttggtgttcggtt 55155
>emb|AL034567.1|ATF8B4 Arabidopsis thaliana DNA chromosome 4, BAC clone F8B4 (ESSA project) Length = 93257 Score = 48.1 bits (24), Expect = 0.024 Identities = 48/56 (85%) Strand = Plus / Plus Query: 373 gagaagatggaggctaggaggatggaccaaacaatgacgatggttggcgtgcggtt 428 |||||||||||||| || || | ||||| ||||||||||||||||| || ||||| Sbjct: 41383 gagaagatggaggcgagaagaacagaccagacaatgacgatggttggtgttcggtt 41438
>gb|BT008654.1| Arabidopsis thaliana clone RAFL09-89-G08 (R19778) putative cellulose synthase catalytic subunit (RSW1) (At4g32410) mRNA, complete cds Length = 3763 Score = 48.1 bits (24), Expect = 0.024 Identities = 48/56 (85%) Strand = Plus / Minus Query: 373 gagaagatggaggctaggaggatggaccaaacaatgacgatggttggcgtgcggtt 428 |||||||||||||| || || | ||||| ||||||||||||||||| || ||||| Sbjct: 3308 gagaagatggaggcgagaagaacagaccagacaatgacgatggttggtgttcggtt 3253
>dbj|AK222115.1| Arabidopsis thaliana mRNA for cellulose synthase catalytic subunit, complete cds, clone: RAFL22-92-A12 Length = 1456 Score = 48.1 bits (24), Expect = 0.024 Identities = 48/56 (85%) Strand = Plus / Minus Query: 373 gagaagatggaggctaggaggatggaccaaacaatgacgatggttggcgtgcggtt 428 |||||||||||||| || || | ||||| ||||||||||||||||| || ||||| Sbjct: 1037 gagaagatggaggcgagaagaacagaccagacaatgacgatggttggtgttcggtt 982
>emb|BX827280.1|CNS0A2E6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS32ZA11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 832 Score = 48.1 bits (24), Expect = 0.024 Identities = 48/56 (85%) Strand = Plus / Minus Query: 373 gagaagatggaggctaggaggatggaccaaacaatgacgatggttggcgtgcggtt 428 |||||||||||||| || || | ||||| ||||||||||||||||| || ||||| Sbjct: 420 gagaagatggaggcgagaagaacagaccagacaatgacgatggttggtgttcggtt 365
>gb|AC123718.9| Mus musculus chromosome 1, clone RP23-401A11, complete sequence Length = 225702 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Minus Query: 220 ctacaacaacaaaatcccatccaa 243 |||||||||||||||||||||||| Sbjct: 146708 ctacaacaacaaaatcccatccaa 146685
>gb|AF027172.1|AF027172 Arabidopsis thaliana cellulose synthase catalytic subunit (RSW1) gene, complete cds Length = 8401 Score = 48.1 bits (24), Expect = 0.024 Identities = 48/56 (85%) Strand = Plus / Minus Query: 373 gagaagatggaggctaggaggatggaccaaacaatgacgatggttggcgtgcggtt 428 |||||||||||||| || || | ||||| ||||||||||||||||| || ||||| Sbjct: 7583 gagaagatggaggcgagaagaacagaccagacaatgacgatggttggtgttcggtt 7528
>gb|DQ020215.1| Bambusa oldhamii cellulose synthase BoCesA7 mRNA, partial cds Length = 2997 Score = 46.1 bits (23), Expect = 0.096 Identities = 50/59 (84%) Strand = Plus / Minus Query: 361 acccacaggagggagaagatggaggctaggaggatggaccaaacaatgacgatggttgg 419 ||||||||||| |||||||| || || || || |||||||| |||||||| || ||||| Sbjct: 2310 acccacaggagcgagaagattgaagccagcagaatggaccagacaatgacaattgttgg 2252
>ref|XM_512070.1| PREDICTED: Pan troglodytes similar to Transcription initiation factor TFIID 105 kDa subunit (TAFII-105) (TAFII105) (LOC455346), mRNA Length = 1547 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 82 agaagaaacaacaggtatcacagatg 107 |||||||||||||||| ||||||||| Sbjct: 1023 agaagaaacaacaggtttcacagatg 998
>gb|AC154641.2| Mus musculus BAC clone RP23-276C17 from chromosome 16, complete sequence Length = 190523 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 371 gggagaagatggaggctaggag 392 |||||||||||||||||||||| Sbjct: 69811 gggagaagatggaggctaggag 69790
>gb|AC022069.6| Homo sapiens, clone RP11-107K17, complete sequence Length = 169240 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 82 agaagaaacaacaggtatcacagatg 107 |||||||||||||||| ||||||||| Sbjct: 153519 agaagaaacaacaggtttcacagatg 153544
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 184 ggggcaataataacttacataa 205 |||||||||||||||||||||| Sbjct: 1008783 ggggcaataataacttacataa 1008804
>ref|XM_937014.1| PREDICTED: Homo sapiens TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa (TAF4B), mRNA Length = 5006 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 82 agaagaaacaacaggtatcacagatg 107 |||||||||||||||| ||||||||| Sbjct: 2205 agaagaaacaacaggtttcacagatg 2180
>ref|XM_290809.5| PREDICTED: Homo sapiens TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa (TAF4B), mRNA Length = 5006 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 82 agaagaaacaacaggtatcacagatg 107 |||||||||||||||| ||||||||| Sbjct: 2205 agaagaaacaacaggtttcacagatg 2180
>gb|AY888049.1| Homo sapiens TAFII105-E9 mRNA, complete cds, alternatively spliced Length = 4432 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 82 agaagaaacaacaggtatcacagatg 107 |||||||||||||||| ||||||||| Sbjct: 1521 agaagaaacaacaggtttcacagatg 1496
>gb|AY888048.1| Homo sapiens TAFII105 mRNA, complete cds, alternatively spliced Length = 4311 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 82 agaagaaacaacaggtatcacagatg 107 |||||||||||||||| ||||||||| Sbjct: 1521 agaagaaacaacaggtttcacagatg 1496
>gb|AC121320.7| Homo sapiens chromosome 18, clone RP11-25D3, complete sequence Length = 81386 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 82 agaagaaacaacaggtatcacagatg 107 |||||||||||||||| ||||||||| Sbjct: 51949 agaagaaacaacaggtttcacagatg 51974
>emb|AL031670.6|HS681N20 Human DNA sequence from clone RP4-681N20 on chromosome 20p12.1-13 Contains the 3' end of the PANK2 gene the Pantothenate kinase 2 (Hallervorden-Spatz syndrome), RNF24 gene for ring finger protein 24, a FTL (ferritin light polypeptide) pseudogene and two CpG Islands, complete sequence Length = 130263 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 217 catctacaacaacaaaatccca 238 |||||||||||||||||||||| Sbjct: 73380 catctacaacaacaaaatccca 73359
>gb|AC120543.7| Mus musculus chromosome 8, clone RP23-330A24, complete sequence Length = 210696 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 acaacaacaaaatcccatcca 242 ||||||||||||||||||||| Sbjct: 172738 acaacaacaaaatcccatcca 172758
>emb|CT009661.10| Mouse DNA sequence from clone CH29-621D18 on chromosome 17, complete sequence Length = 224982 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 222 acaacaacaaaatcccatccaaccc 246 ||||||||||||||||| ||||||| Sbjct: 51271 acaacaacaaaatcccaaccaaccc 51295
>gb|AC126252.3| Mus musculus BAC clone RP23-480B9 from chromosome 17, complete sequence Length = 172380 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 222 acaacaacaaaatcccatccaaccc 246 ||||||||||||||||| ||||||| Sbjct: 34402 acaacaacaaaatcccaaccaaccc 34378
>emb|AL353764.9| Human DNA sequence from clone RP11-440G5 on chromosome 9 Contains the NFIL3 gene for interleukin 3 regulated nuclear factor, a novel gene and two CpG islands, complete sequence Length = 170898 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 atataaatagttggtgtcata 38 ||||||||||||||||||||| Sbjct: 112748 atataaatagttggtgtcata 112768
>dbj|AK164733.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630050G05 product:serine/arginine-rich protein specific kinase 1, full insert sequence Length = 4958 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 222 acaacaacaaaatcccatccaaccc 246 ||||||||||||||||| ||||||| Sbjct: 2256 acaacaacaaaatcccaaccaaccc 2232
>gb|DP000006.1| Oryctolagus cuniculus target 1 genomic scaffold Length = 1889755 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 75 tactctaagaagaaacaacaggtatcaca 103 ||||| ||||||||||||||| ||||||| Sbjct: 965698 tactcaaagaagaaacaacagctatcaca 965670
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 311 gccccatggcgacggctttctgggt 335 |||||||||||| |||||||||||| Sbjct: 3045032 gccccatggcgaaggctttctgggt 3045008
>gb|AC153100.3| Oryctolagus cuniculus clone LB1-192J7, complete sequence Length = 132131 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 75 tactctaagaagaaacaacaggtatcaca 103 ||||| ||||||||||||||| ||||||| Sbjct: 131918 tactcaaagaagaaacaacagctatcaca 131890
>gb|AC151390.3| Oryctolagus cuniculus clone LB1-118M16, complete sequence Length = 41753 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 75 tactctaagaagaaacaacaggtatcaca 103 ||||| ||||||||||||||| ||||||| Sbjct: 1784 tactcaaagaagaaacaacagctatcaca 1756
>emb|X60106.1|ECCSVR E.coli csvR gene Length = 4689 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 189 aataataacttacataaaact 209 ||||||||||||||||||||| Sbjct: 4034 aataataacttacataaaact 4014
>gb|AC147054.4| Pan troglodytes BAC clone RP43-145A1 from 7, complete sequence Length = 153627 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ataaatagttggtgtcatag 39 |||||||||||||||||||| Sbjct: 64706 ataaatagttggtgtcatag 64687
>gb|AY633541.1| Physcomitrella patens cellulose synthase catalytic subunit (CesA1) gene, partial cds Length = 4060 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 397 gaccaaacaatgacgatggttggcgtgcggttctgc 432 ||||| ||||| ||||| ||||| |||||||||||| Sbjct: 3552 gaccacacaatcacgattgttggagtgcggttctgc 3517
>gb|AY633540.1| Physcomitrella patens cellulose synthase (CesA2) pseudogene, partial sequence Length = 5304 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 360 cacccacaggagggagaagatgga 383 |||||||| ||||||||||||||| Sbjct: 5212 cacccacaagagggagaagatgga 5189
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 caacaaaatcccatccaacc 245 |||||||||||||||||||| Sbjct: 1996161 caacaaaatcccatccaacc 1996142
>gb|AC166564.2| Spironucleus vortens clone JGIBAWF-9K17, complete sequence Length = 38651 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 213 tcttcatctacaacaacaaaatcc 236 ||||||||||| |||||||||||| Sbjct: 21531 tcttcatctaccacaacaaaatcc 21554
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 tatcacagatgaaaagaaaaggag 120 ||||||| |||||||||||||||| Sbjct: 28659938 tatcacatatgaaaagaaaaggag 28659915
>gb|DQ160225.1| Physcomitrella patens cellulose synthase catalytic subunit (CesA7) mRNA, complete cds Length = 4016 Score = 40.1 bits (20), Expect = 5.9 Identities = 59/72 (81%) Strand = Plus / Minus Query: 360 cacccacaggagggagaagatggaggctaggaggatggaccaaacaatgacgatggttgg 419 ||||||||| || ||||||||||| || || ||||| ||||| || || ||||| || || Sbjct: 3358 cacccacagaagcgagaagatggacgccagcaggatcgaccacacgatcacgatcgtcgg 3299 Query: 420 cgtgcggttctg 431 || |||||||| Sbjct: 3298 tgtccggttctg 3287
>gb|DQ160224.1| Physcomitrella patens cellulose synthase catalytic subunit (CesA6) mRNA, complete cds Length = 4070 Score = 40.1 bits (20), Expect = 5.9 Identities = 59/72 (81%) Strand = Plus / Minus Query: 360 cacccacaggagggagaagatggaggctaggaggatggaccaaacaatgacgatggttgg 419 ||||||||| || ||||||||||| || || ||||| ||||| || || ||||| || || Sbjct: 3385 cacccacagaagcgagaagatggacgccagcaggatcgaccacacgatcacgatcgtcgg 3326 Query: 420 cgtgcggttctg 431 || |||||||| Sbjct: 3325 tgtccggttctg 3314
>emb|AL139246.20| Human DNA sequence from clone RP3-395M20 on chromosome 1p36.11-36.33 Contains two genes for novel proteins (KIAA0450, FLJ00417, FLJ00414, FLJ00222, MGC26818, FLJ32465, DKFZp547M123, FLJ37582, ), five novel genes (FLJ11705, FLJ46690), the PANK4 gene for pantothenate kinase 4, the gene for a novel protein (ortholog of rodent hairy and enhancer of split 5 (Drosophila) (Hes5)), the TNFRSF14 gene for tumor necrosis factor receptor superfamily member 14 (herpesvirus entry mediator), the 3' end of the MMEL2 gene for membrane metallo-endopeptidase-like 2 and three CpG islands, complete sequence Length = 154736 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 361 acccacaggagggagaagatggag 384 |||||||||||||||||| ||||| Sbjct: 60650 acccacaggagggagaagctggag 60673
>ref|XM_969653.1| PREDICTED: Tribolium castaneum similar to CG32717-PB, isoform B (LOC663614), mRNA Length = 3150 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tcttcggcgccgatcagcag 297 |||||||||||||||||||| Sbjct: 644 tcttcggcgccgatcagcag 625
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 caacaaaatcccatccaacc 245 |||||||||||||||||||| Sbjct: 157785 caacaaaatcccatccaacc 157766
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 tatcacagatgaaaagaaaaggag 120 ||||||| |||||||||||||||| Sbjct: 28751262 tatcacatatgaaaagaaaaggag 28751239
>gb|DQ020213.1| Bambusa oldhamii cellulose synthase BoCesA5 mRNA, complete cds Length = 3613 Score = 40.1 bits (20), Expect = 5.9 Identities = 59/72 (81%) Strand = Plus / Minus Query: 361 acccacaggagggagaagatggaggctaggaggatggaccaaacaatgacgatggttggc 420 |||||||| | ||||||||| || || |||||||||| ||| || | || ||||| || Sbjct: 3384 acccacagcaaggagaagatagatgcaaggaggatggcccagacgacaacaatggtcggt 3325 Query: 421 gtgcggttctgc 432 |||||||||||| Sbjct: 3324 gtgcggttctgc 3313
>gb|DQ020212.1| Bambusa oldhamii cellulose synthase BoCesA4b mRNA, partial cds Length = 3409 Score = 40.1 bits (20), Expect = 5.9 Identities = 56/68 (82%) Strand = Plus / Minus Query: 361 acccacaggagggagaagatggaggctaggaggatggaccaaacaatgacgatggttggc 420 |||||||| | ||||||||| || || |||||||| | ||| |||| || ||||| ||| Sbjct: 3137 acccacagcaaggagaagatcgaagcaaggaggattgcccagacaacaacaatggtcggc 3078 Query: 421 gtgcggtt 428 |||||||| Sbjct: 3077 gtgcggtt 3070
>emb|BX829135.1|CNS0A3FB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL74ZE06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 666 Score = 40.1 bits (20), Expect = 5.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 373 gagaagatggaggctaggaggatggaccaaacaatgacgatggttggcgtgcggtt 428 |||||||||||||| || || | ||||| | ||||||||||||||| || ||||| Sbjct: 213 gagaagatggaggcgagaagaacagaccagaaaatgacgatggttggtgttcggtt 158
>gb|AC090882.10| Oryza sativa chromosome 3 BAC OSJNBa0014G15 genomic sequence, complete sequence Length = 158839 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 tatcacagatgaaaagaaaaggag 120 ||||||| |||||||||||||||| Sbjct: 38958 tatcacatatgaaaagaaaaggag 38981
>gb|AF200533.1|AF200533 Zea mays cellulose synthase-9 (CesA-9) mRNA, complete cds Length = 3795 Score = 40.1 bits (20), Expect = 5.9 Identities = 59/72 (81%) Strand = Plus / Minus Query: 361 acccacaggagggagaagatggaggctaggaggatggaccaaacaatgacgatggttggc 420 |||||||| | ||||||||| || || || ||||| | ||| |||| |||||||| || Sbjct: 3410 acccacagcaaggagaagatcgacgccagcaggatcgcccagacaaccacgatggtcggg 3351 Query: 421 gtgcggttctgc 432 |||||||||||| Sbjct: 3350 gtgcggttctgc 3339
>gb|AY112236.1| Zea mays CL1160_1 mRNA sequence Length = 3728 Score = 40.1 bits (20), Expect = 5.9 Identities = 59/72 (81%) Strand = Plus / Minus Query: 361 acccacaggagggagaagatggaggctaggaggatggaccaaacaatgacgatggttggc 420 |||||||| | ||||||||| || || || ||||| | ||| |||| |||||||| || Sbjct: 3410 acccacagcaaggagaagatcgacgccagcaggatcgcccagacaaccacgatggtcggg 3351 Query: 421 gtgcggttctgc 432 |||||||||||| Sbjct: 3350 gtgcggttctgc 3339
>emb|CR942285.1| Escherichia coli plasmid pCoo Length = 98396 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 aataataacttacataaaac 208 |||||||||||||||||||| Sbjct: 68588 aataataacttacataaaac 68569
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 417 tggcgtgcggttctgcttcccatg 440 |||||||||||| ||||||||||| Sbjct: 63238 tggcgtgcggttgtgcttcccatg 63215 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,468,857 Number of Sequences: 3902068 Number of extensions: 4468857 Number of successful extensions: 82275 Number of sequences better than 10.0: 112 Number of HSP's better than 10.0 without gapping: 112 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81811 Number of HSP's gapped (non-prelim): 460 length of query: 442 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 420 effective length of database: 17,147,199,772 effective search space: 7201823904240 effective search space used: 7201823904240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)