ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl41c05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC158939.9| Mus musculus chromosome 5, clone RP23-204A8, comp... 44 0.36
2emb|AL662914.8| Human DNA sequence from clone RP13-419C3 on chro... 44 0.36
3gb|AC017089.3| Homo sapiens BAC clone RP11-500H5 from X, complet... 44 0.36
4emb|CR931798.8| Mouse DNA sequence from clone RP23-89A4 on chrom... 42 1.4
5gb|AC124715.4| Mus musculus BAC clone RP24-130P22 from chromosom... 42 1.4
6gb|AC093851.5| Homo sapiens chromosome 4 clone RP11-499N1, compl... 42 1.4
7emb|CR926468.3| Mouse DNA sequence from clone RP24-191A5 on chro... 42 1.4
8emb|BX511142.3| Zebrafish DNA sequence from clone CH211-69B22 in... 42 1.4
9dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge... 42 1.4
10dbj|AP002801.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 1.4
11emb|AL954823.1| Mouse DNA sequence from clone RP23-326I8 on chro... 42 1.4
12gb|AC168879.4| Mus musculus BAC clone RP24-407B6 from chromosome... 40 5.6
13gb|AC118698.7| Mus musculus chromosome 1, clone RP24-82I5, compl... 40 5.6
14gb|AC130649.2| Drosophila melanogaster clone BACR06L03, complete... 40 5.6
15gb|AC018483.11| Drosophila melanogaster clone BACR11B22, complet... 40 5.6
16gb|AC158619.12| Mus musculus 10 BAC RP23-291O3 (Roswell Park Can... 40 5.6
17ref|XM_454428.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E10571g ... 40 5.6
18emb|CR626904.15| Zebrafish DNA sequence from clone DKEY-53D10 in... 40 5.6
19emb|AL390774.10| Human DNA sequence from clone RP11-417B4 on chr... 40 5.6
20emb|AL359980.9| Human DNA sequence from clone RP5-1027O15 on chr... 40 5.6
21emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 5.6
22emb|AL034558.3|PFMAL3P2 Plasmodium falciparum MAL3P2, complete s... 40 5.6
23gb|AC106849.5| Homo sapiens chromosome 11, clone CTD-2154J7, com... 40 5.6
24gb|AC109779.6| Homo sapiens 3 BAC RP11-16J16 (Roswell Park Cance... 40 5.6
25dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 40 5.6
26gb|AC110058.4| Homo sapiens chromosome 11, clone CTD2-3012A18, c... 40 5.6
27gb|AC104515.1| Drosophila melanogaster, chromosome X, region 20B... 40 5.6
28gb|AC099022.1| Drosophila melanogaster, chromosome 2L, region 23... 40 5.6
29gb|AC159477.9| Mus musculus 10 BAC RP23-95I8 (Roswell Park Cance... 40 5.6
30emb|AL603724.3|RN141K6 Rattus norvegicus chromosome 20 clone PAC... 40 5.6
31gb|AC008321.7| Drosophila melanogaster, chromosome 2L, region 23... 40 5.6
32gb|AC021699.5|AC021699 Homo sapiens chromosome 11, clone RP11-27... 40 5.6
33gb|AC093721.3| Homo sapiens BAC clone CTD-2010B10 from 4, comple... 40 5.6
34gb|AC016908.5| Homo sapiens BAC clone RP11-457D4 from 2, complet... 40 5.6
35gb|AC006207.5| Homo sapiens 12 PAC RPCI3-488H23 (Roswell Park Ca... 40 5.6
36emb|BX648417.1|HSM808565 Homo sapiens mRNA; cDNA DKFZp686B17245 ... 40 5.6
37gb|AE003788.5| Drosophila melanogaster chromosome 2R, section 1 ... 40 5.6
38gb|AE003581.4| Drosophila melanogaster chromosome 2L, section 10... 40 5.6
39gb|AE003574.6| Drosophila melanogaster chromosome X, section 73 ... 40 5.6
40gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta... 40 5.6
41gb|AC173115.2| Mus musculus BAC clone RP23-26D2 from chromosome ... 40 5.6
42gb|AC173210.3| Mus musculus BAC clone RP23-29I5 from chromosome ... 40 5.6
43gb|CP000219.1| Drosophila melanogaster genomic scaffold 21100002... 40 5.6
44gb|AC004422.1|AC004422 Drosophila melanogaster (P1 DS08493 (D141... 40 5.6 
>gb|AC158939.9| Mus musculus chromosome 5, clone RP23-204A8, complete sequence
          Length = 218847

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 388   gagcaaaatagaaaacaaaacc 409
             ||||||||||||||||||||||
Sbjct: 93648 gagcaaaatagaaaacaaaacc 93627
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>emb|AL662914.8| Human DNA sequence from clone RP13-419C3 on chromosome X, complete
             sequence
          Length = 110403

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 173   aagaataacagctacaaaacat 194
             ||||||||||||||||||||||
Sbjct: 89662 aagaataacagctacaaaacat 89683
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>gb|AC017089.3| Homo sapiens BAC clone RP11-500H5 from X, complete sequence
          Length = 178320

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 173    aagaataacagctacaaaacat 194
              ||||||||||||||||||||||
Sbjct: 108061 aagaataacagctacaaaacat 108040
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>emb|CR931798.8| Mouse DNA sequence from clone RP23-89A4 on chromosome 4, complete
             sequence
          Length = 83980

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 374   atgaacaaaagaatgagcaaa 394
             |||||||||||||||||||||
Sbjct: 44393 atgaacaaaagaatgagcaaa 44373
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>gb|AC124715.4| Mus musculus BAC clone RP24-130P22 from chromosome 14, complete
             sequence
          Length = 178742

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 387   tgagcaaaatagaaaacaaaa 407
             |||||||||||||||||||||
Sbjct: 58056 tgagcaaaatagaaaacaaaa 58036
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>gb|AC093851.5| Homo sapiens chromosome 4 clone RP11-499N1, complete sequence
          Length = 200968

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 389   agcaaaatagaaaacaaaaccgtct 413
             |||| ||||||||||||||||||||
Sbjct: 95773 agcagaatagaaaacaaaaccgtct 95749
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>emb|CR926468.3| Mouse DNA sequence from clone RP24-191A5 on chromosome 4, complete
             sequence
          Length = 129452

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 374   atgaacaaaagaatgagcaaa 394
             |||||||||||||||||||||
Sbjct: 70622 atgaacaaaagaatgagcaaa 70602
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>emb|BX511142.3| Zebrafish DNA sequence from clone CH211-69B22 in linkage group 14,
             complete sequence
          Length = 168322

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 364   ttaataaaagatgaacaaaag 384
             |||||||||||||||||||||
Sbjct: 98896 ttaataaaagatgaacaaaag 98916
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>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 187     caaaacatcatgcccagctga 207
               |||||||||||||||||||||
Sbjct: 3525773 caaaacatcatgcccagctga 3525753
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>dbj|AP002801.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-875G18, complete
             sequence
          Length = 218651

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 134   agagaacagcaaagcagagat 154
             |||||||||||||||||||||
Sbjct: 29028 agagaacagcaaagcagagat 29048
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>emb|AL954823.1| Mouse DNA sequence from clone RP23-326I8 on chromosome 4, complete
            sequence
          Length = 50368

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 374  atgaacaaaagaatgagcaaa 394
            |||||||||||||||||||||
Sbjct: 5976 atgaacaaaagaatgagcaaa 5996
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>gb|AC168879.4| Mus musculus BAC clone RP24-407B6 from chromosome 13, complete sequence
          Length = 169877

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 389    agcaaaatagaaaacaaaac 408
              ||||||||||||||||||||
Sbjct: 142045 agcaaaatagaaaacaaaac 142064
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>gb|AC118698.7| Mus musculus chromosome 1, clone RP24-82I5, complete sequence
          Length = 233783

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 374   atgaacaaaagaatgagcaa 393
             ||||||||||||||||||||
Sbjct: 41563 atgaacaaaagaatgagcaa 41582
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>gb|AC130649.2| Drosophila melanogaster clone BACR06L03, complete sequence
          Length = 144234

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 388   gagcaaaatagaaaacaaaa 407
             ||||||||||||||||||||
Sbjct: 76455 gagcaaaatagaaaacaaaa 76474
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>gb|AC018483.11| Drosophila melanogaster clone BACR11B22, complete sequence
          Length = 176595

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 388   gagcaaaatagaaaacaaaa 407
             ||||||||||||||||||||
Sbjct: 77584 gagcaaaatagaaaacaaaa 77565
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>gb|AC158619.12| Mus musculus 10 BAC RP23-291O3 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 250421

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     gttgctgaatgataactgga 80
              ||||||||||||||||||||
Sbjct: 231584 gttgctgaatgataactgga 231565
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>ref|XM_454428.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E10571g predicted mRNA
          Length = 1101

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 357  aataggcttaataaaagatg 376
            ||||||||||||||||||||
Sbjct: 1051 aataggcttaataaaagatg 1070
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>emb|CR626904.15| Zebrafish DNA sequence from clone DKEY-53D10 in linkage group 8,
             complete sequence
          Length = 203689

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 380   aaaagaatgagcaaaatagaaaacaaaa 407
             ||||||| ||| ||||||||||||||||
Sbjct: 78582 aaaagaaagagaaaaatagaaaacaaaa 78555
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>emb|AL390774.10| Human DNA sequence from clone RP11-417B4 on chromosome 9 Contains part
             of the gene for a novel protein (KIAA1608), a novel gene,
             a LSM5 homolog, U6 small nuclear RNA associated (S.
             cerevisiae) (LSM5) pseudogene and a phosphatidylinositol
             glycan, class F (PIGF) pseudogene, complete sequence
          Length = 197055

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 286   aaaaattctctgttgctaac 305
             ||||||||||||||||||||
Sbjct: 90591 aaaaattctctgttgctaac 90610
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>emb|AL359980.9| Human DNA sequence from clone RP5-1027O15 on chromosome 11, complete
             sequence
          Length = 83218

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 381   aaagaatgagcaaaatagaa 400
             ||||||||||||||||||||
Sbjct: 32441 aaagaatgagcaaaatagaa 32422
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>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 2234072

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 357    aataggcttaataaaagatg 376
              ||||||||||||||||||||
Sbjct: 934371 aataggcttaataaaagatg 934352
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>emb|AL034558.3|PFMAL3P2 Plasmodium falciparum MAL3P2, complete sequence
          Length = 158548

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 364   ttaataaaagatgaacaaaagaat 387
             ||||||||| ||||||||||||||
Sbjct: 88158 ttaataaaaaatgaacaaaagaat 88135
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>gb|AC106849.5| Homo sapiens chromosome 11, clone CTD-2154J7, complete sequence
          Length = 81277

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 381   aaagaatgagcaaaatagaa 400
             ||||||||||||||||||||
Sbjct: 66117 aaagaatgagcaaaatagaa 66098
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>gb|AC109779.6| Homo sapiens 3 BAC RP11-16J16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 89162

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 272   tttcatctttacacaaaaat 291
             ||||||||||||||||||||
Sbjct: 30932 tttcatctttacacaaaaat 30951
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>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 384     gaatgagcaaaatagaaaacaaaa 407
               |||| |||||||||||||||||||
Sbjct: 1054056 gaattagcaaaatagaaaacaaaa 1054033
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>gb|AC110058.4| Homo sapiens chromosome 11, clone CTD2-3012A18, complete sequence
          Length = 158915

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 381   aaagaatgagcaaaatagaa 400
             ||||||||||||||||||||
Sbjct: 40112 aaagaatgagcaaaatagaa 40131
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>gb|AC104515.1| Drosophila melanogaster, chromosome X, region 20B-20C, BAC clone
              BACR27K09, complete sequence
          Length = 179386

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 388    gagcaaaatagaaaacaaaa 407
              ||||||||||||||||||||
Sbjct: 141065 gagcaaaatagaaaacaaaa 141084
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>gb|AC099022.1| Drosophila melanogaster, chromosome 2L, region 23C-23D, BAC clone
             BACR48B06, complete sequence
          Length = 184554

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 374   atgaacaaaagaatgagcaa 393
             ||||||||||||||||||||
Sbjct: 82501 atgaacaaaagaatgagcaa 82482
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>gb|AC159477.9| Mus musculus 10 BAC RP23-95I8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 222553

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     gttgctgaatgataactgga 80
              ||||||||||||||||||||
Sbjct: 164034 gttgctgaatgataactgga 164053
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>emb|AL603724.3|RN141K6 Rattus norvegicus chromosome 20 clone PAC RPCI-31-484K6 strain Brown
             Norway (BN/ssNHsd), RT1n haplotype
          Length = 94535

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 364   ttaataaaagatgaacaaaa 383
             ||||||||||||||||||||
Sbjct: 81700 ttaataaaagatgaacaaaa 81719
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>gb|AC008321.7| Drosophila melanogaster, chromosome 2L, region 23D-23F, BAC clone
              BACR11E09, complete sequence
          Length = 169931

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 374    atgaacaaaagaatgagcaa 393
              ||||||||||||||||||||
Sbjct: 140865 atgaacaaaagaatgagcaa 140846
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>gb|AC021699.5|AC021699 Homo sapiens chromosome 11, clone RP11-277B22, complete sequence
          Length = 163386

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 381    aaagaatgagcaaaatagaa 400
              ||||||||||||||||||||
Sbjct: 103667 aaagaatgagcaaaatagaa 103648
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>gb|AC093721.3| Homo sapiens BAC clone CTD-2010B10 from 4, complete sequence
          Length = 128148

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 384   gaatgagcaaaatagaaaacaaaa 407
             |||||||||| |||||||||||||
Sbjct: 58544 gaatgagcaagatagaaaacaaaa 58567
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>gb|AC016908.5| Homo sapiens BAC clone RP11-457D4 from 2, complete sequence
          Length = 183515

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 367    ataaaagatgaacaaaagaa 386
              ||||||||||||||||||||
Sbjct: 122717 ataaaagatgaacaaaagaa 122736
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>gb|AC006207.5| Homo sapiens 12 PAC RPCI3-488H23 (Roswell Park Cancer Institute Human
             PAC Library) complete sequence
          Length = 109003

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 377   aacaaaagaatgagcaaaatagaaaaca 404
             ||||||| |||||| |||||||||||||
Sbjct: 29181 aacaaaaaaatgagaaaaatagaaaaca 29208
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>emb|BX648417.1|HSM808565 Homo sapiens mRNA; cDNA DKFZp686B17245 (from clone DKFZp686B17245)
          Length = 5757

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 377  aacaaaagaatgagcaaaatagaaaaca 404
            ||||||| |||||| |||||||||||||
Sbjct: 1386 aacaaaaaaatgagaaaaatagaaaaca 1359
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>gb|AE003788.5| Drosophila melanogaster chromosome 2R, section 1 of 73 of the complete
              sequence
          Length = 585533

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 388    gagcaaaatagaaaacaaaa 407
              ||||||||||||||||||||
Sbjct: 467532 gagcaaaatagaaaacaaaa 467551
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>gb|AE003581.4| Drosophila melanogaster chromosome 2L, section 10 of 83 of the complete
              sequence
          Length = 314957

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 374    atgaacaaaagaatgagcaa 393
              ||||||||||||||||||||
Sbjct: 290808 atgaacaaaagaatgagcaa 290827
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>gb|AE003574.6| Drosophila melanogaster chromosome X, section 73 of 74 of the complete
             sequence
          Length = 273468

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 388   gagcaaaatagaaaacaaaa 407
             ||||||||||||||||||||
Sbjct: 38559 gagcaaaatagaaaacaaaa 38540
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>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome
          Length = 1751377

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 129    ggggcagagaacagcaaagcagag 152
              ||||||||||||||||| ||||||
Sbjct: 771729 ggggcagagaacagcaaggcagag 771752
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>gb|AC173115.2| Mus musculus BAC clone RP23-26D2 from chromosome 13, complete sequence
          Length = 221491

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 389    agcaaaatagaaaacaaaac 408
              ||||||||||||||||||||
Sbjct: 196289 agcaaaatagaaaacaaaac 196270
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>gb|AC173210.3| Mus musculus BAC clone RP23-29I5 from chromosome 13, complete sequence
          Length = 228881

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 389    agcaaaatagaaaacaaaac 408
              ||||||||||||||||||||
Sbjct: 171542 agcaaaatagaaaacaaaac 171561
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>gb|CP000219.1| Drosophila melanogaster genomic scaffold 211000022280778
          Length = 150125

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 388   gagcaaaatagaaaacaaaa 407
             ||||||||||||||||||||
Sbjct: 41005 gagcaaaatagaaaacaaaa 40986
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>gb|AC004422.1|AC004422 Drosophila melanogaster (P1 DS08493 (D141)) DNA sequence, complete
             sequence
          Length = 77137

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 374   atgaacaaaagaatgagcaa 393
             ||||||||||||||||||||
Sbjct: 73830 atgaacaaaagaatgagcaa 73811


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,181,541
Number of Sequences: 3902068
Number of extensions: 5181541
Number of successful extensions: 119457
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 119312
Number of HSP's gapped (non-prelim): 145
length of query: 416
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 394
effective length of database: 17,147,199,772
effective search space: 6755996710168
effective search space used: 6755996710168
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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