>SYK2_MYCTU (P94974) Putative lysyl-tRNA synthetase 2 (EC 6.1.1.6)|
           (Lysine--tRNA ligase 2) (LysRS 2)
          Length = 1172

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +3

Query: 63  VLPLQRRNAVHKGHRP 110
           VLP  RRN VH GH P
Sbjct: 628 VLPFSRRNRVHTGHHP 643

>SYK2_MYCBO (Q7VEV7) Putative lysyl-tRNA synthetase 2 (EC 6.1.1.6)|
           (Lysine--tRNA ligase 2) (LysRS 2)
          Length = 1172

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +3

Query: 63  VLPLQRRNAVHKGHRP 110
           VLP  RRN VH GH P
Sbjct: 628 VLPFSRRNRVHTGHHP 643

>URED_SYNY3 (P73047) Urease accessory protein ureD|
          Length = 270

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -3

Query: 284 SVDERRQWHAQSWFRYESFGHRAKLSRELI*KLSKKERLY 165
           +V+    W A  W RY+  GHR ++   L+    K +R +
Sbjct: 6   TVNPSAPWQANLWLRYDRPGHRTRMVECLVQAPLKVQRSF 45


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,789,866
Number of Sequences: 219361
Number of extensions: 622455
Number of successful extensions: 1707
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1707
length of database: 80,573,946
effective HSP length: 70
effective length of database: 65,218,676
effective search space used: 1565248224
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)