>gb|AC142210.1| Solanum demissum chromosome 11 BAC PGEC589 genomic sequence, complete
             sequence
          Length = 91755

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 312   ctacatgacacaattgcaacagattg 337
             |||||||| |||||||||||||||||
Sbjct: 20673 ctacatgagacaattgcaacagattg 20648

>emb|AL109915.10|HSDJ120N9 Human DNA sequence from clone RP1-120N9 on chromosome 6q13-15 Contains
              the SNAP91 gene for synaptosomal-associated protein, 91 kD
              homolog (mouse) (KIAA0656) and a CpG island, complete
              sequence
          Length = 167018

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 238    aatcttttgtacattataaaaa 259
              ||||||||||||||||||||||
Sbjct: 106168 aatcttttgtacattataaaaa 106189

>gb|AE006367.1| Lactococcus lactis subsp. lactis IL1403 section 129 of 218 of the
            complete genome
          Length = 11901

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 101  gttttttgtcaaaaaaggcct 121
            |||||||||||||||||||||
Sbjct: 4932 gttttttgtcaaaaaaggcct 4912

>gb|AC134508.2| Homo sapiens 3 BAC RP11-447M4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 51315

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 219   tcttctcatccctctctttaa 239
             |||||||||||||||||||||
Sbjct: 29023 tcttctcatccctctctttaa 29043

>gb|U13876.3| Caenorhabditis elegans cosmid F57B9, complete sequence
          Length = 39112

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 42   cgaaatacagtatctcaatcc 62
            |||||||||||||||||||||
Sbjct: 5828 cgaaatacagtatctcaatcc 5808

>gb|AC090092.9| Homo sapiens chromosome 11, clone RP11-266A24, complete sequence
          Length = 101116

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 213   tcttcctcttctcatccctct 233
             |||||||||||||||||||||
Sbjct: 82774 tcttcctcttctcatccctct 82794

>gb|AC148584.23| Gasterosteus aculeatus clone ch213-278g3, complete sequence
          Length = 169579

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 217   cctcttctcatccctctcttt 237
             |||||||||||||||||||||
Sbjct: 41686 cctcttctcatccctctcttt 41706

>gb|AC107925.5| Homo sapiens chromosome 11, clone RP11-379A20, complete sequence
          Length = 170801

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 213  tcttcctcttctcatccctct 233
            |||||||||||||||||||||
Sbjct: 7996 tcttcctcttctcatccctct 8016

>gb|AC100541.17| Mus musculus chromosome 8, clone RP23-152F18, complete sequence
          Length = 204424

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 316   atgacacaattgcaacagatt 336
             |||||||||||||||||||||
Sbjct: 73824 atgacacaattgcaacagatt 73844

>gb|AY648725.1| Danio rerio Opa-interacting protein 2 mRNA, complete cds
          Length = 987

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 126 atggaagggagttgggagag 145
           ||||||||||||||||||||
Sbjct: 98  atggaagggagttgggagag 117

>gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0025P09,
              complete sequence
          Length = 167318

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 239    atcttttgtacattataaaa 258
              ||||||||||||||||||||
Sbjct: 157323 atcttttgtacattataaaa 157304

>gb|AC108874.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_E12,
             complete sequence
          Length = 121293

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 239   atcttttgtacattataaaa 258
             ||||||||||||||||||||
Sbjct: 28118 atcttttgtacattataaaa 28099

>gb|AC124764.3| Mus musculus BAC clone RP23-166K1 from chromosome 18, complete sequence
          Length = 209579

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   tcttcctcttctcatccctc 232
             ||||||||||||||||||||
Sbjct: 64584 tcttcctcttctcatccctc 64565

>emb|CR753837.14| Zebrafish DNA sequence from clone DKEY-234K7 in linkage group 5, complete
              sequence
          Length = 135495

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 246    gtacattataaaaacatctt 265
              ||||||||||||||||||||
Sbjct: 118337 gtacattataaaaacatctt 118318

>gb|BC048021.1| Xenopus laevis enzymatic glycosylation-regulating gene, mRNA (cDNA
            clone MGC:52826 IMAGE:4884583), complete cds
          Length = 3336

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 242  ttttgtacattataaaaaca 261
            ||||||||||||||||||||
Sbjct: 3216 ttttgtacattataaaaaca 3235

>ref|XM_737168.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000048.02.0)
           partial mRNA
          Length = 1161

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 238 aatcttttgtacattataaaaaca 261
           |||||||||||||||| |||||||
Sbjct: 324 aatcttttgtacattagaaaaaca 347

>emb|BX465844.25| Zebrafish DNA sequence from clone CH211-106I3 in linkage group 10,
            complete sequence
          Length = 167771

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 126  atggaagggagttgggagag 145
            ||||||||||||||||||||
Sbjct: 2324 atggaagggagttgggagag 2343

>gb|AC094020.2| Homo sapiens chromosome 3 clone RP11-425J9, complete sequence
          Length = 194729

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     tcacatctattcttacacca 98
              ||||||||||||||||||||
Sbjct: 114772 tcacatctattcttacacca 114791

>ref|NM_001002865.1| Danio rerio exosome component 8 (exosc8), mRNA
          Length = 987

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 126 atggaagggagttgggagag 145
           ||||||||||||||||||||
Sbjct: 98  atggaagggagttgggagag 117

>gb|BC095236.1| Danio rerio exosome component 8, mRNA (cDNA clone MGC:110381
           IMAGE:7410517), complete cds
          Length = 968

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 126 atggaagggagttgggagag 145
           ||||||||||||||||||||
Sbjct: 81  atggaagggagttgggagag 100

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 239      atcttttgtacattataaaa 258
                ||||||||||||||||||||
Sbjct: 17897369 atcttttgtacattataaaa 17897350

>gb|AC106892.3| Homo sapiens BAC clone RP11-55L3 from 4, complete sequence
          Length = 164051

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 213    tcttcctcttctcatccctc 232
              ||||||||||||||||||||
Sbjct: 129969 tcttcctcttctcatccctc 129950

>gb|AC068284.5| Homo sapiens BAC clone RP11-473K18 from 2, complete sequence
          Length = 110512

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    acaaacttcacatctattct 91
             ||||||||||||||||||||
Sbjct: 22462 acaaacttcacatctattct 22481

>emb|BX571779.6| Mouse DNA sequence from clone RP23-415G1 on chromosome X, complete
            sequence
          Length = 97756

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 238  aatcttttgtacattataaa 257
            ||||||||||||||||||||
Sbjct: 6181 aatcttttgtacattataaa 6162

>emb|BX322606.6| Zebrafish DNA sequence from clone DKEY-40F12, complete sequence
          Length = 240928

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 246   gtacattataaaaacatctt 265
             ||||||||||||||||||||
Sbjct: 72225 gtacattataaaaacatctt 72206

>emb|AL132857.4|CNS01DTS Human chromosome 14 DNA sequence BAC R-896J10 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 166862

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 243    tttgtacattataaaaacatcttt 266
              ||||||||||||||||||| ||||
Sbjct: 106494 tttgtacattataaaaacaacttt 106517


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,695,739
Number of Sequences: 3902068
Number of extensions: 3695739
Number of successful extensions: 73469
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73409
Number of HSP's gapped (non-prelim): 60
length of query: 364
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 342
effective length of database: 17,147,199,772
effective search space: 5864342322024
effective search space used: 5864342322024
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)