>PAL2_ORYSA (P53443) Phenylalanine ammonia-lyase (EC 4.3.1.5)|
          Length = 710

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = +1

Query: 130 CVRIARGPLYTGPAALLKVQEKRNEKKHIIFNYRESLVAVARLALREIEVAGAA 291
           CVR    PL  G A       + +E K I   YR+ LV +   +LR  +VA  A
Sbjct: 17  CVRPRADPLNWGKATEEMTGSQVDEVKRIGAEYRQPLVKIEGASLRIAQVAAVA 70

>CCNA1_HUMAN (P78396) Cyclin-A1|
          Length = 465

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -2

Query: 234 LAIIENDVFL-FVPFLLYFEQCCWASI*WSSCDSHTWPSDESYGTGFRLKAIASC 73
           L+++E D FL ++P L+     C A+    + + H WP   +  TG+ L  I  C
Sbjct: 371 LSLLEADPFLKYLPSLIAAAAFCLANY---TVNKHFWPETLAAFTGYSLSEIVPC 422

>TTLL4_HUMAN (Q14679) Tubulin--tyrosine ligase-like protein 4|
          Length = 1199

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +1

Query: 292 HSWPELYLGRLLP*PSAYDRQRLPRLETLANRSAPSQGS 408
           HS P+L+   LL   S+Y ++   +LE+   RS+PS+ S
Sbjct: 106 HSLPDLFNSTLLYRRSSYRQKPYQQLESFCLRSSPSEKS 144

>SYM_ENTFA (Q837B3) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA|
           ligase) (MetRS)
          Length = 669

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +1

Query: 160 TGPAALLKVQEKRNEKKHIIFNYRESLVAVARL 258
           T P  L K +EKRNE + ++ +  ESL  VA L
Sbjct: 439 TAPWVLAKEEEKRNELESVMIHLAESLRIVAIL 471


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,582,277
Number of Sequences: 219361
Number of extensions: 1007144
Number of successful extensions: 2278
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2276
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)