ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl41a12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY109108.1| Zea mays PCO116815 mRNA sequence 76 7e-11
2ref|XM_469360.1| Oryza sativa (japonica cultivar-group), mRNA 64 3e-07
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 64 3e-07
4gb|AC137998.2| Oryza sativa chromosome 3 BAC OSJNBa0010B01 genom... 64 3e-07
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 64 3e-07
6gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genom... 64 3e-07
7dbj|AK121157.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 3e-07
8gb|AY112223.1| Zea mays CL3071_1 mRNA sequence 60 4e-06
9gb|BT017806.1| Zea mays clone EL01N0506F04.c mRNA sequence 52 0.001
10gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome... 52 0.001
11dbj|AK066973.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.001
12gb|AC153930.2| Mus musculus 10 BAC RP24-461H14 (Roswell Park Can... 46 0.065
13gb|AC146506.1| Solanum demissum chromosome 5 BAC PGEC989P08 geno... 44 0.26
14gb|AY730338.1| Solanum tuberosum strain P6/210 clone BAC BA47f2,... 42 1.0
15ref|XM_537383.2| PREDICTED: Canis familiaris similar to RING fin... 42 1.0
16gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.0
17dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.0
18dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.0
19dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.0
20dbj|AK100513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.0
21emb|AL670175.12| Mouse DNA sequence from clone RP23-309K20 on ch... 42 1.0
22gb|AC113122.9| Mus musculus chromosome 8, clone RP23-349P4, comp... 40 4.0
23gb|AC125339.4| Mus musculus BAC clone RP24-356P17 from chromosom... 40 4.0
24emb|Z95310.1|CEH40L08 Caenorhabditis elegans Fosmid H40L08, comp... 40 4.0
25emb|AL683828.8| Mouse DNA sequence from clone RP23-340H1 on chro... 40 4.0
26emb|AL845501.9| Mouse DNA sequence from clone RP23-194C12 on chr... 40 4.0
27gb|AC105426.4| Homo sapiens BAC clone RP11-794N18 from 4, comple... 40 4.0
28ref|NM_079456.2| Drosophila melanogaster Soluble NSF attachment ... 40 4.0
29gb|AC009839.10| Drosophila melanogaster 3L BAC RP98-16G9 (Roswel... 40 4.0
30gb|AC093260.2| Homo sapiens chromosome 5 clone RP11-237B16, comp... 40 4.0
31gb|AC138310.3| Mus musculus BAC clone RP23-205H21 from chromosom... 40 4.0
32gb|AC083783.8| Homo sapiens chromosome 17, clone RP11-462C21, co... 40 4.0
33gb|AC092960.3| Homo sapiens 3 BAC RP11-393B14 (Roswell Park Canc... 40 4.0
34gb|AC113368.3| Homo sapiens chromosome 5 clone RP11-116B13, comp... 40 4.0
35ref|XM_228548.3| PREDICTED: Rattus norvegicus similar to hypothe... 40 4.0
36gb|AY069477.1| Drosophila melanogaster LD21601 full insert cDNA 40 4.0
37emb|AL583742.2|CNS07EFV Human chromosome 14 DNA sequence BAC R-3... 40 4.0
38gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71... 40 4.0
39gb|AC005291.1|AC005291 Homo sapiens chromosome 17, clone hRPK.40... 40 4.0
40gb|U09374.1|DMU09374 Drosophila melanogaster soluble NSF attachm... 40 4.0
41emb|AL691423.14| Mouse DNA sequence from clone RP23-21D3 on chro... 40 4.0 
>gb|AY109108.1| Zea mays PCO116815 mRNA sequence
          Length = 1041

 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                       
Query: 159 tctagtttcttctcagcctcaccgatgacccgcagttgctcgaaaaaggcggtgagcttc 218
           |||| |||||||||||| |||| |||||||   |||||||| || || ||||||||||||
Sbjct: 801 tctaatttcttctcagcttcactgatgacctctagttgctccaacaaagcggtgagcttc 742

                                                 
Query: 219 ctcatgtcctcctcttggacactggggggagccttctc 256
           |||||||||||||| || || ||  | |||||||||||
Sbjct: 741 ctcatgtcctcctcctgtacgctctgtggagccttctc 704
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>ref|XM_469360.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3534

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                        
Query: 210  gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaaccggac 269
            ||||| || |||||||||||||| |||||| |  | |||||||||||| ||||||| || 
Sbjct: 3092 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 3033

                                
Query: 270  gcttccatcttctgagacag 289
            |||||||| ||||| |||||
Sbjct: 3032 gcttccattttctgtgacag 3013
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                            
Query: 210      gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaaccggac 269
                ||||| || |||||||||||||| |||||| |  | |||||||||||| ||||||| || 
Sbjct: 27542742 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 27542683

                                    
Query: 270      gcttccatcttctgagacag 289
                |||||||| ||||| |||||
Sbjct: 27542682 gcttccattttctgtgacag 27542663



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                
Query: 246    ggagccttctctctgtaaccggacgcttccatcttctgagacagggcatg 295
              |||||||||||| | |||||||| |||||||| ||||| || ||||||||
Sbjct: 652074 ggagccttctctttataaccggaagcttccattttctgtgatagggcatg 652025



 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 156      gcatctagtttcttctcagcctcac 180
                |||||||||||||||||||| ||||
Sbjct: 12395727 gcatctagtttcttctcagcttcac 12395751
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>gb|AC137998.2| Oryza sativa chromosome 3 BAC OSJNBa0010B01 genomic sequence, complete
             sequence
          Length = 27470

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                         
Query: 210   gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaaccggac 269
             ||||| || |||||||||||||| |||||| |  | |||||||||||| ||||||| || 
Sbjct: 20032 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 20091

                                 
Query: 270   gcttccatcttctgagacag 289
             |||||||| ||||| |||||
Sbjct: 20092 gcttccattttctgtgacag 20111
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                            
Query: 210      gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaaccggac 269
                ||||| || |||||||||||||| |||||| |  | |||||||||||| ||||||| || 
Sbjct: 27634065 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 27634006

                                    
Query: 270      gcttccatcttctgagacag 289
                |||||||| ||||| |||||
Sbjct: 27634005 gcttccattttctgtgacag 27633986



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                
Query: 246    ggagccttctctctgtaaccggacgcttccatcttctgagacagggcatg 295
              |||||||||||| | |||||||| |||||||| ||||| || ||||||||
Sbjct: 652072 ggagccttctctttataaccggaagcttccattttctgtgatagggcatg 652023



 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 156      gcatctagtttcttctcagcctcac 180
                |||||||||||||||||||| ||||
Sbjct: 12392490 gcatctagtttcttctcagcttcac 12392514
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>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence,
            complete sequence
          Length = 123406

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                        
Query: 210  gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaaccggac 269
            ||||| || |||||||||||||| |||||| |  | |||||||||||| ||||||| || 
Sbjct: 7772 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 7831

                                
Query: 270  gcttccatcttctgagacag 289
            |||||||| ||||| |||||
Sbjct: 7832 gcttccattttctgtgacag 7851
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>dbj|AK121157.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079F18, full
            insert sequence
          Length = 3587

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                        
Query: 210  gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaaccggac 269
            ||||| || |||||||||||||| |||||| |  | |||||||||||| ||||||| || 
Sbjct: 3304 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 3245

                                
Query: 270  gcttccatcttctgagacag 289
            |||||||| ||||| |||||
Sbjct: 3244 gcttccattttctgtgacag 3225
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>gb|AY112223.1| Zea mays CL3071_1 mRNA sequence
          Length = 1082

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                       
Query: 159 tctagtttcttctcagcctcaccgatgacccgcagttgctcgaaaaaggcggtgagcttc 218
           |||| |||||||||||| |||| |||||||   ||||| || || || ||||||||||| 
Sbjct: 446 tctaatttcttctcagcttcactgatgacctctagttgttccaacaaagcggtgagcttt 505

                         
Query: 219 ctcatgtcctcctc 232
           ||||||||||||||
Sbjct: 506 ctcatgtcctcctc 519
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>gb|BT017806.1| Zea mays clone EL01N0506F04.c mRNA sequence
          Length = 1244

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                       
Query: 159 tctagtttcttctcagcctcaccgatgacccgcagttgctcgaaaaaggcggtgagcttc 218
           |||| |||||||||||| |||| |||||||   ||||| || || || |||| |||||| 
Sbjct: 953 tctaatttcttctcagcttcactgatgacctctagttgttccaacaaagcggggagcttt 894

                                                 
Query: 219 ctcatgtcctcctcttggacactggggggagccttctc 256
           |||||||||||||| || || ||  | |||||||||||
Sbjct: 893 ctcatgtcctcctcctgcacgctctgtggagccttctc 856
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>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0005F16, complete sequence
          Length = 160053

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 246   ggagccttctctctgtaaccggacgcttccatcttctgagacagggcatg 295
             |||||||||||| | |||||||| |||||||| ||||| || ||||||||
Sbjct: 37955 ggagccttctctttataaccggaagcttccattttctgtgatagggcatg 37906
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>dbj|AK066973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089D01, full
            insert sequence
          Length = 4411

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 246  ggagccttctctctgtaaccggacgcttccatcttctgagacagggcatg 295
            |||||||||||| | |||||||| |||||||| ||||| || ||||||||
Sbjct: 4113 ggagccttctctttataaccggaagcttccattttctgtgatagggcatg 4064
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>gb|AC153930.2| Mus musculus 10 BAC RP24-461H14 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 186915

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 28     tttgaattttctataaatgtgacatca 54
              |||||| ||||||||||||||||||||
Sbjct: 132214 tttgaaatttctataaatgtgacatca 132188
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>gb|AC146506.1| Solanum demissum chromosome 5 BAC PGEC989P08 genomic sequence, complete
             sequence
          Length = 121915

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 26    catttgaattttctataaatgt 47
             ||||||||||||||||||||||
Sbjct: 75708 catttgaattttctataaatgt 75687
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>gb|AY730338.1| Solanum tuberosum strain P6/210 clone BAC BA47f2, complete sequence
          Length = 81567

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 27    atttgaattttctataaatgt 47
             |||||||||||||||||||||
Sbjct: 74176 atttgaattttctataaatgt 74196
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>ref|XM_537383.2| PREDICTED: Canis familiaris similar to RING finger protein 31 (Zinc
            in-between-RING-finger ubiquitin-associated domain
            protein) (LOC480259), mRNA
          Length = 3490

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 175  cctcaccgatgacccgcagttgctc 199
            ||||||||||||| |||||||||||
Sbjct: 2442 cctcaccgatgacacgcagttgctc 2466
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>gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0098H14, complete sequence
          Length = 132560

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 156   gcatctagtttcttctcagcctcac 180
             |||||||||||||||||||| ||||
Sbjct: 54745 gcatctagtttcttctcagcttcac 54769
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 81      tatcaacttccaaacaaaaat 101
               |||||||||||||||||||||
Sbjct: 9829802 tatcaacttccaaacaaaaat 9829822
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>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0456E06
          Length = 164353

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 81     tatcaacttccaaacaaaaat 101
              |||||||||||||||||||||
Sbjct: 120044 tatcaacttccaaacaaaaat 120064
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>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0063H02
          Length = 152326

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 81    tatcaacttccaaacaaaaat 101
             |||||||||||||||||||||
Sbjct: 26437 tatcaacttccaaacaaaaat 26457
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>dbj|AK100513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099P08, full
            insert sequence
          Length = 3639

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 156  gcatctagtttcttctcagcctcac 180
            |||||||||||||||||||| ||||
Sbjct: 3519 gcatctagtttcttctcagcttcac 3495
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>emb|AL670175.12| Mouse DNA sequence from clone RP23-309K20 on chromosome 4, complete
              sequence
          Length = 168158

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 43     aatgtgacatcaccaccatcc 63
              |||||||||||||||||||||
Sbjct: 140982 aatgtgacatcaccaccatcc 141002
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>gb|AC113122.9| Mus musculus chromosome 8, clone RP23-349P4, complete sequence
          Length = 203728

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    ccatttgaattttctataaa 44
             ||||||||||||||||||||
Sbjct: 23208 ccatttgaattttctataaa 23189
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>gb|AC125339.4| Mus musculus BAC clone RP24-356P17 from chromosome 17, complete
             sequence
          Length = 156282

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    aacttccaaacaaaaatgcc 104
             ||||||||||||||||||||
Sbjct: 16747 aacttccaaacaaaaatgcc 16766
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>emb|Z95310.1|CEH40L08 Caenorhabditis elegans Fosmid H40L08, complete sequence
          Length = 15122

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 85   aacttccaaacaaaaatgcc 104
            ||||||||||||||||||||
Sbjct: 3649 aacttccaaacaaaaatgcc 3668
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>emb|AL683828.8| Mouse DNA sequence from clone RP23-340H1 on chromosome 4 Contains the
             3' end of the Col27a1 gene for procollagen type XXVII
             alpha 1, the Orm1, Orm2 and Orm3 genes for orosomucoid 1,
             2 and 3, an orosomucoid pseudogene, the gene for a novel
             protein similar to human AT-hook protein AKNA, gene
             4933437N03Rik, the Whrn gene for whirlin and two CpG
             islands, complete sequence
          Length = 214370

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   gagcttcctcatgtcctcct 231
             ||||||||||||||||||||
Sbjct: 31754 gagcttcctcatgtcctcct 31735
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>emb|AL845501.9| Mouse DNA sequence from clone RP23-194C12 on chromosome 4 Contains a
             ribosomal protein S18 (Rps18) pseudogene, complete
             sequence
          Length = 156572

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 272   ttccatcttctgagacaggg 291
             ||||||||||||||||||||
Sbjct: 31116 ttccatcttctgagacaggg 31135
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>gb|AC105426.4| Homo sapiens BAC clone RP11-794N18 from 4, complete sequence
          Length = 55775

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 214   gcttcctcatgtcctcctct 233
             ||||||||||||||||||||
Sbjct: 23507 gcttcctcatgtcctcctct 23526
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>ref|NM_079456.2| Drosophila melanogaster Soluble NSF attachment protein CG6625-RA
            (Snap), mRNA
          Length = 2069

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   gaattttctataaatgtgac 50
            ||||||||||||||||||||
Sbjct: 1762 gaattttctataaatgtgac 1743
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>gb|AC009839.10| Drosophila melanogaster 3L BAC RP98-16G9 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 185918

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     gaattttctataaatgtgac 50
              ||||||||||||||||||||
Sbjct: 106242 gaattttctataaatgtgac 106223
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>gb|AC093260.2| Homo sapiens chromosome 5 clone RP11-237B16, complete sequence
          Length = 168521

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 33   attttctataaatgtgacat 52
            ||||||||||||||||||||
Sbjct: 1961 attttctataaatgtgacat 1980
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>gb|AC138310.3| Mus musculus BAC clone RP23-205H21 from chromosome 17, complete sequence
          Length = 195483

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 85     aacttccaaacaaaaatgcc 104
              ||||||||||||||||||||
Sbjct: 160602 aacttccaaacaaaaatgcc 160621
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>gb|AC083783.8| Homo sapiens chromosome 17, clone RP11-462C21, complete sequence
          Length = 143516

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     tgaattttctataaatgtga 49
              ||||||||||||||||||||
Sbjct: 121095 tgaattttctataaatgtga 121076
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>gb|AC092960.3| Homo sapiens 3 BAC RP11-393B14 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 172507

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     catttgaattttctataaat 45
              ||||||||||||||||||||
Sbjct: 161099 catttgaattttctataaat 161080
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>gb|AC113368.3| Homo sapiens chromosome 5 clone RP11-116B13, complete sequence
          Length = 155354

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    attttctataaatgtgacat 52
             ||||||||||||||||||||
Sbjct: 23774 attttctataaatgtgacat 23793
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>ref|XM_228548.3| PREDICTED: Rattus norvegicus similar to hypothetical protein
            6430402L03 (LOC302412), mRNA
          Length = 1632

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 215  cttcctcatgtcctcctctt 234
            ||||||||||||||||||||
Sbjct: 1005 cttcctcatgtcctcctctt 986
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>gb|AY069477.1| Drosophila melanogaster LD21601 full insert cDNA
          Length = 2054

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   gaattttctataaatgtgac 50
            ||||||||||||||||||||
Sbjct: 1730 gaattttctataaatgtgac 1711
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>emb|AL583742.2|CNS07EFV Human chromosome 14 DNA sequence BAC R-318A9 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 175584

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    atgtgacatcaccaccatcc 63
             ||||||||||||||||||||
Sbjct: 71007 atgtgacatcaccaccatcc 71026
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>gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71 of 83 of the complete
              sequence
          Length = 299903

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     gaattttctataaatgtgac 50
              ||||||||||||||||||||
Sbjct: 288396 gaattttctataaatgtgac 288377
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>gb|AC005291.1|AC005291 Homo sapiens chromosome 17, clone hRPK.401_O_9, complete sequence
          Length = 198582

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    tgaattttctataaatgtga 49
             ||||||||||||||||||||
Sbjct: 63377 tgaattttctataaatgtga 63358
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>gb|U09374.1|DMU09374 Drosophila melanogaster soluble NSF attachment protein mRNA, complete
            cds
          Length = 2038

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   gaattttctataaatgtgac 50
            ||||||||||||||||||||
Sbjct: 1718 gaattttctataaatgtgac 1699
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>emb|AL691423.14| Mouse DNA sequence from clone RP23-21D3 on chromosome 2, complete
              sequence
          Length = 216415

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 28     tttgaattttctataaatgt 47
              ||||||||||||||||||||
Sbjct: 104442 tttgaattttctataaatgt 104461


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,292,677
Number of Sequences: 3902068
Number of extensions: 3292677
Number of successful extensions: 100705
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100514
Number of HSP's gapped (non-prelim): 191
length of query: 307
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 285
effective length of database: 17,147,199,772
effective search space: 4886951935020
effective search space used: 4886951935020
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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