>gb|BT009533.1| Triticum aestivum clone wr1.pk0133.f5:fis, full insert mRNA sequence
          Length = 1820

 Score =  125 bits (63), Expect = 5e-26
 Identities = 81/87 (93%)
 Strand = Plus / Minus

                                                                        
Query: 58   ttacaatcctttacagacgagaagggcgacagttttacaccaggcacttgcctccctgta 117
            |||||||||||||||| ||| |||||||||||||| |||||  |||||||||||||||||
Sbjct: 1305 ttacaatcctttacaggcgaaaagggcgacagtttcacaccgagcacttgcctccctgta 1246

                                       
Query: 118  atgctagtctagcacaatggcgagccg 144
            |||||||||||||||||||| ||||||
Sbjct: 1245 atgctagtctagcacaatggtgagccg 1219



 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 3    agagcgaaacagggcggcataactttattagcaa 36
            |||||||||||| ||||||| |||||||||||||
Sbjct: 1374 agagcgaaacagtgcggcatcactttattagcaa 1341

>gb|AC107868.9| Mus musculus chromosome 17, clone RP23-405A17, complete sequence
          Length = 193624

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 30     ttagcaaggttgttattgttt 50
              |||||||||||||||||||||
Sbjct: 139290 ttagcaaggttgttattgttt 139270

>gb|AC113038.14| Mus musculus chromosome 17, clone RP23-228K17, complete sequence
          Length = 226769

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 30     ttagcaaggttgttattgttt 50
              |||||||||||||||||||||
Sbjct: 149441 ttagcaaggttgttattgttt 149461

>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome
          Length = 2201561

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 45      ttgtttataacagttacaa 63
               |||||||||||||||||||
Sbjct: 1643802 ttgtttataacagttacaa 1643784

>emb|CR847570.9| Zebrafish DNA sequence from clone DKEY-29M9 in linkage group 3,
             complete sequence
          Length = 124104

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 38    gttgttattgtttataaca 56
             |||||||||||||||||||
Sbjct: 74621 gttgttattgtttataaca 74639

>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome
          Length = 1485148

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 22     taactttattagcaaggtt 40
              |||||||||||||||||||
Sbjct: 251957 taactttattagcaaggtt 251939

>emb|AL591480.8| Human DNA sequence from clone RP11-525G3 on chromosome 6 Contains the
            3' end of the gene for CD109 (CD109) and a CpG island,
            complete sequence
          Length = 91419

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 36   aggttgttattgtttataa 54
            |||||||||||||||||||
Sbjct: 4984 aggttgttattgtttataa 4966

>emb|AL450163.12| Human DNA sequence from clone RP11-384L19 on chromosome 1 Contains part
             of the gene for C-terminal PDZ domain ligand of neuronal
             nitric oxide synthase (CAPON), complete sequence
          Length = 208408

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 38    gttgttattgtttataacagtta 60
             ||||||||||||||||| |||||
Sbjct: 15348 gttgttattgtttataatagtta 15326

>gb|AC118772.5| Rattus norvegicus 10 BAC CH230-404C20 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 178272

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 86    acagttttacaccaggcacttgc 108
             ||||| |||||||||||||||||
Sbjct: 59773 acagtattacaccaggcacttgc 59751

>emb|BX769175.12| Zebrafish DNA sequence from clone DKEY-229K5 in linkage group 3,
             complete sequence
          Length = 154794

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 38    gttgttattgtttataaca 56
             |||||||||||||||||||
Sbjct: 44124 gttgttattgtttataaca 44142

>emb|BX927154.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5,
             complete genome; segment 7/10
          Length = 349575

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 75    cgagaagggcgacagtttt 93
             |||||||||||||||||||
Sbjct: 88305 cgagaagggcgacagtttt 88323

>gb|AF168681.1| Homo sapiens CRIM1 protein gene, partial cds; and FEZ2 gene, partial
              sequence
          Length = 236303

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 104    cttgcctccctgtaatgct 122
              |||||||||||||||||||
Sbjct: 228356 cttgcctccctgtaatgct 228338

>gb|AC097259.6| Homo sapiens X BAC RP11-594H22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 85944

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 90    ttttacaccaggcacttgc 108
             |||||||||||||||||||
Sbjct: 60933 ttttacaccaggcacttgc 60915

>gb|AY275833.1| Homo sapiens polymerase (DNA directed), alpha (POLA) gene, complete cds
          Length = 304837

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 79     aagggcgacagttttacaccagg 101
              |||||| ||||||||||||||||
Sbjct: 135794 aagggcaacagttttacaccagg 135772

>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 75      cgagaagggcgacagtttt 93
               |||||||||||||||||||
Sbjct: 2213249 cgagaagggcgacagtttt 2213267

>gb|AC007401.4| Homo sapiens BAC clone RP11-501O7 from 2, complete sequence
          Length = 83656

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 104   cttgcctccctgtaatgct 122
             |||||||||||||||||||
Sbjct: 34404 cttgcctccctgtaatgct 34422

>ref|XM_579763.1| PREDICTED: Rattus norvegicus LOC497968 (LOC497968), mRNA
          Length = 825

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 86  acagttttacaccaggcacttgc 108
           ||||| |||||||||||||||||
Sbjct: 781 acagtattacaccaggcacttgc 803

>gb|AC104780.4| Homo sapiens BAC clone RP11-27N13 from 2, complete sequence
          Length = 76501

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 36    aggttgttattgtttataacagttaca 62
             ||||||||||| ||||||||| |||||
Sbjct: 32104 aggttgttattctttataacatttaca 32130

>emb|AL162451.16| Human DNA sequence from clone RP11-145C1, complete sequence
          Length = 156963

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 48     tttataacagttacaatccttta 70
              ||||| |||||||||||||||||
Sbjct: 109657 tttatcacagttacaatccttta 109635

>dbj|AK175027.1| Ciona intestinalis cDNA, clone:cixxx00069, full insert sequence
          Length = 2108

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 86   acagttttacaccaggcac 104
            |||||||||||||||||||
Sbjct: 1420 acagttttacaccaggcac 1402

>dbj|AK174244.1| Ciona intestinalis cDNA, clone:cicl008b08, full insert sequence
          Length = 1481

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 86   acagttttacaccaggcac 104
            |||||||||||||||||||
Sbjct: 1394 acagttttacaccaggcac 1376

>emb|CT485675.4| RP43-034D18, complete sequence
          Length = 163081

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 79    aagggcgacagttttacaccagg 101
             |||||| ||||||||||||||||
Sbjct: 72992 aagggcaacagttttacaccagg 73014

>emb|AL022070.1|SPBC3B9 S.pombe chromosome II cosmid c3B9
          Length = 36733

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 24    actttattagcaaggttgttatt 46
             |||||||||||||| ||||||||
Sbjct: 33590 actttattagcaagtttgttatt 33568

>gb|AF060558.1|AF060558 Corynebacterium glutamicum glutamine amidotransferase (hisH)
          gene, complete cds
          Length = 636

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 75 cgagaagggcgacagtttt 93
          |||||||||||||||||||
Sbjct: 25 cgagaagggcgacagtttt 7

>emb|AL935192.10| Zebrafish DNA sequence from clone CH211-252B2, complete sequence
          Length = 192649

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 38    gttgttattgtttataaca 56
             |||||||||||||||||||
Sbjct: 81193 gttgttattgtttataaca 81211

>gb|AC079375.24| Homo sapiens X BAC RP11-757E1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 172649

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 79    aagggcgacagttttacaccagg 101
             |||||| ||||||||||||||||
Sbjct: 73158 aagggcaacagttttacaccagg 73180


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,311,738
Number of Sequences: 3902068
Number of extensions: 1311738
Number of successful extensions: 95036
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94953
Number of HSP's gapped (non-prelim): 83
length of query: 184
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 162
effective length of database: 17,147,199,772
effective search space: 2777846363064
effective search space used: 2777846363064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)