>gb|AC109140.6| Mus musculus chromosome 5, clone RP23-153N23, complete sequence
          Length = 228663

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 98    caagggcacagctgctctctc 118
             |||||||||||||||||||||
Sbjct: 47331 caagggcacagctgctctctc 47311

>gb|AC126441.5| Mus musculus BAC clone RP23-431D8 from chromosome 7, complete sequence
          Length = 220308

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 24    aaatatggcatttcttacaaa 44
             |||||||||||||||||||||
Sbjct: 37050 aaatatggcatttcttacaaa 37070

>gb|AC124457.4| Mus musculus BAC clone RP24-134O20 from chromosome 7, complete sequence
          Length = 166862

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 24     aaatatggcatttcttacaaa 44
              |||||||||||||||||||||
Sbjct: 107558 aaatatggcatttcttacaaa 107578

>emb|AL160255.14| Human DNA sequence from clone RP11-60N6 on chromosome 13 Contains the 5'
              end of a novel gene (KIAA0774), complete sequence
          Length = 172923

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 116    ctcccaaaagagaagaaaatgaaag 140
              |||||||||||||| ||||||||||
Sbjct: 121568 ctcccaaaagagaaaaaaatgaaag 121592

>emb|AJ307670.1|MMU307670 Mus musculus St5 gene, L27a gene and Kiaa0298 gene
          Length = 202748

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 24     aaatatggcatttcttacaaa 44
              |||||||||||||||||||||
Sbjct: 148314 aaatatggcatttcttacaaa 148294

>emb|AL807753.10| Mouse DNA sequence from clone RP23-359L15 on chromosome X, complete
             sequence
          Length = 189848

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 120   caaaagagaagaaaatgaaag 140
             |||||||||||||||||||||
Sbjct: 22335 caaaagagaagaaaatgaaag 22355

>emb|AL824705.5| Mouse DNA sequence from clone RP23-102G9 on chromosome 4, complete
             sequence
          Length = 144458

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 181   tgttttgccccttatagtttctttg 205
             |||||||||||||||| ||||||||
Sbjct: 54358 tgttttgccccttatattttctttg 54382

>ref|XM_597913.2| PREDICTED: Bos taurus similar to CG14085-PB, isoform B (LOC519688),
           mRNA
          Length = 2871

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 264 ggcattatttcttctgggcg 283
           ||||||||||||||||||||
Sbjct: 896 ggcattatttcttctgggcg 915

>ref|XM_456542.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0A05104g)
            partial mRNA
          Length = 4761

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 92   ctcattcaagggcacagctg 111
            ||||||||||||||||||||
Sbjct: 2295 ctcattcaagggcacagctg 2276

>gb|AC121895.3| Mus musculus BAC clone RP24-157P5 from chromosome 2, complete sequence
          Length = 171557

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    aaaagagaagaaaatgaaag 140
              ||||||||||||||||||||
Sbjct: 113979 aaaagagaagaaaatgaaag 113998

>gb|AC112701.6| Mus musculus BAC clone RP23-171A11 from 13, complete sequence
          Length = 184506

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   aaaagagaagaaaatgaaag 140
             ||||||||||||||||||||
Sbjct: 53181 aaaagagaagaaaatgaaag 53162

>gb|AC117608.13| Mus musculus chromosome 14, clone RP23-100O3, complete sequence
          Length = 210905

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    aaaagagaagaaaatgaaag 140
              ||||||||||||||||||||
Sbjct: 140607 aaaagagaagaaaatgaaag 140626

>emb|Z98946.15|HS376D21 Human DNA sequence from clone RP3-376D21 on chromosome Xq11.1-12
             Contains the MSN gene for Moesin and a CpG island,
             complete sequence
          Length = 149671

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 108   gctgctctctcccaaaagagaaga 131
             ||||||||||||| ||||||||||
Sbjct: 49335 gctgctctctccctaaagagaaga 49358

>emb|Z93784.1|HS398C22 Human DNA sequence from clone RP3-398C22 on chromosome 22q13,
            complete sequence
          Length = 89328

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 121  aaaagagaagaaaatgaaag 140
            ||||||||||||||||||||
Sbjct: 3931 aaaagagaagaaaatgaaag 3912

>emb|AL683807.22| Human DNA sequence from clone RP13-297E16 on chromosome X Contains the
              DXYS155E gene for DNA segment on chromosome X and Y
              (unique) 155 expressed sequence (XE7, XE7Y), the ASMT gene
              for acetylserotonin O-methyltransferase (ASMTY, HIOMT,
              HIOMTY), three novel genes and three CpG islands, complete
              sequence
          Length = 189825

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    caaaagagaagaaaatgaaa 139
              ||||||||||||||||||||
Sbjct: 101371 caaaagagaagaaaatgaaa 101352

>emb|AL161788.13| Human DNA sequence from clone RP11-421B23 on chromosome 9 Contains a
              novel pseudogene and a pseudogene similar to part of
              ribosomal protein S3A (RPS3A), complete sequence
          Length = 170460

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 181    tgttttgccccttatagttt 200
              ||||||||||||||||||||
Sbjct: 147459 tgttttgccccttatagttt 147440

>emb|CR628362.8| Zebrafish DNA sequence from clone DKEY-74A12 in linkage group 18,
             complete sequence
          Length = 200732

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 181   tgttttgccccttatagttt 200
             ||||||||||||||||||||
Sbjct: 70804 tgttttgccccttatagttt 70823

>emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces
              hansenii
          Length = 1249565

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     ctcattcaagggcacagctg 111
              ||||||||||||||||||||
Sbjct: 404688 ctcattcaagggcacagctg 404669

>gb|AC093502.2| Drosophila melanogaster 3L BAC RP98-48C4 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 166249

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 21     aaaaaatatggcatttcttacaaa 44
              ||||||||||||||||||| ||||
Sbjct: 155954 aaaaaatatggcatttcttccaaa 155977

>gb|AC169788.4| Medicago truncatula clone mth2-28c18, complete sequence
          Length = 122876

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   aaaagagaagaaaatgaaag 140
             ||||||||||||||||||||
Sbjct: 91140 aaaagagaagaaaatgaaag 91121

>gb|AC010031.8| Drosophila melanogaster 3L BAC RP98-2M20 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 173509

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 21    aaaaaatatggcatttcttacaaa 44
             ||||||||||||||||||| ||||
Sbjct: 87963 aaaaaatatggcatttcttccaaa 87986

>gb|AC134967.20| Medicago truncatula clone mth2-26b8, complete sequence
          Length = 133030

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   aaaagagaagaaaatgaaag 140
             ||||||||||||||||||||
Sbjct: 30564 aaaagagaagaaaatgaaag 30583

>gb|AC079630.18| Homo sapiens 12 BAC RP11-476D10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 178388

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 163    acacaagagtaaacaaaatg 182
              ||||||||||||||||||||
Sbjct: 158002 acacaagagtaaacaaaatg 158021

>gb|AC106754.3| Homo sapiens chromosome 5 clone RP11-184E9, complete sequence
          Length = 123535

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 92    ctcattcaagggcacagctgctctctcc 119
             |||| |||||||||||| ||||||||||
Sbjct: 72737 ctcactcaagggcacagatgctctctcc 72710

>gb|AC161620.5| Pan troglodytes BAC clone CH251-232H7 from chromosome unknown, complete
              sequence
          Length = 204271

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    acacaagagtaaacaaaatg 182
              ||||||||||||||||||||
Sbjct: 150582 acacaagagtaaacaaaatg 150563

>dbj|AP001303.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K24M9
          Length = 45292

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   aaaagagaagaaaatgaaag 140
             ||||||||||||||||||||
Sbjct: 12796 aaaagagaagaaaatgaaag 12777

>gb|DQ340387.1| Dictyostelium polycephalum 17S ribosomal RNA, 5.8S ribosomal RNA, and
            26S ribosomal RNA genes, complete sequence
          Length = 19540

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   ttcttacaaatatccaatgt 54
            ||||||||||||||||||||
Sbjct: 4095 ttcttacaaatatccaatgt 4076

>gb|AC151976.3| Mus musculus BAC clone RP24-446O20 from 10, complete sequence
          Length = 174449

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   aaaagagaagaaaatgaaag 140
             ||||||||||||||||||||
Sbjct: 57731 aaaagagaagaaaatgaaag 57712

>emb|CR387935.16| Zebrafish DNA sequence from clone CH211-212O1 in linkage group 18,
              complete sequence
          Length = 152685

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 181    tgttttgccccttatagttt 200
              ||||||||||||||||||||
Sbjct: 121966 tgttttgccccttatagttt 121947

>emb|CR812466.18| Zebrafish DNA sequence from clone CH211-269M1 in linkage group 1,
             complete sequence
          Length = 138505

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   aaaagagaagaaaatgaaag 140
             ||||||||||||||||||||
Sbjct: 11656 aaaagagaagaaaatgaaag 11637

>gb|AE003536.4| Drosophila melanogaster chromosome 3L, section 49 of 83 of the complete
              sequence
          Length = 350428

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 21     aaaaaatatggcatttcttacaaa 44
              ||||||||||||||||||| ||||
Sbjct: 172157 aaaaaatatggcatttcttccaaa 172134

>emb|AL929440.5| Mouse DNA sequence from clone RP23-292F11 on chromosome 2, complete
             sequence
          Length = 143594

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   aaaagagaagaaaatgaaag 140
             ||||||||||||||||||||
Sbjct: 51383 aaaagagaagaaaatgaaag 51402

>gb|DQ138932.1| Drosophila melanogaster strain Ral1 CG12105 gene, partial cds
          Length = 4161

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 111  gctctctcccaaaagagaag 130
            ||||||||||||||||||||
Sbjct: 2397 gctctctcccaaaagagaag 2416


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,802,526
Number of Sequences: 3902068
Number of extensions: 3802526
Number of successful extensions: 81349
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81283
Number of HSP's gapped (non-prelim): 66
length of query: 405
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 383
effective length of database: 17,147,199,772
effective search space: 6567377512676
effective search space used: 6567377512676
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)