ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl41a03 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL604063.4| Mouse DNA sequence from clone RP23-467J12 on chromosome 11, complete sequence Length = 146759 Score = 48.1 bits (24), Expect = 0.010 Identities = 24/24 (100%) Strand = Plus / Plus Query: 91 taactttgattctttaaaaataaa 114 |||||||||||||||||||||||| Sbjct: 42422 taactttgattctttaaaaataaa 42445
>gb|AC008558.7|AC008558 Homo sapiens chromosome 5 clone CTC-531G16, complete sequence Length = 210532 Score = 48.1 bits (24), Expect = 0.010 Identities = 27/28 (96%) Strand = Plus / Minus Query: 9 aaacagagtaaacttatttattacagca 36 |||||||||||| ||||||||||||||| Sbjct: 124834 aaacagagtaaaattatttattacagca 124807
>gb|AC126270.4| Mus musculus BAC clone RP23-233A12 from chromosome 10, complete sequence Length = 208709 Score = 46.1 bits (23), Expect = 0.039 Identities = 23/23 (100%) Strand = Plus / Plus Query: 95 tttgattctttaaaaataaataa 117 ||||||||||||||||||||||| Sbjct: 45907 tttgattctttaaaaataaataa 45929
>gb|AC132437.3| Mus musculus BAC clone RP23-230M17 from chromosome 5, complete sequence Length = 176825 Score = 46.1 bits (23), Expect = 0.039 Identities = 23/23 (100%) Strand = Plus / Plus Query: 95 tttgattctttaaaaataaataa 117 ||||||||||||||||||||||| Sbjct: 124153 tttgattctttaaaaataaataa 124175
>gb|AC153364.4| Mus musculus BAC clone RP23-35J21 from chromosome 10, complete sequence Length = 231668 Score = 46.1 bits (23), Expect = 0.039 Identities = 23/23 (100%) Strand = Plus / Plus Query: 95 tttgattctttaaaaataaataa 117 ||||||||||||||||||||||| Sbjct: 190750 tttgattctttaaaaataaataa 190772
>gb|AC157588.8| Mus musculus BAC clone RP24-95J4 from chromosome 5, complete sequence Length = 220137 Score = 46.1 bits (23), Expect = 0.039 Identities = 23/23 (100%) Strand = Plus / Plus Query: 95 tttgattctttaaaaataaataa 117 ||||||||||||||||||||||| Sbjct: 29710 tttgattctttaaaaataaataa 29732
>gb|AC096745.2| Homo sapiens BAC clone RP11-358D17 from 4, complete sequence Length = 158952 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 ttgattctttaaaaataaataa 117 |||||||||||||||||||||| Sbjct: 127502 ttgattctttaaaaataaataa 127481
>gb|AC018742.5| Homo sapiens BAC clone RP11-644J14 from 2, complete sequence Length = 174225 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Plus Query: 91 taactttgattctttaaaaata 112 |||||||||||||||||||||| Sbjct: 57096 taactttgattctttaaaaata 57117
>emb|AL109759.4|CNS018OW Human chromosome 14 DNA sequence BAC R-898B23 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 201794 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 90 ttaactttgattctttaaaaataaat 115 |||||||||||| ||||||||||||| Sbjct: 168330 ttaactttgattttttaaaaataaat 168305
>gb|DQ068952.1| Phanogenia gracilis mitochondrion, complete genome Length = 15892 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 ttgattctttaaaaataaataa 117 |||||||||||||||||||||| Sbjct: 1147 ttgattctttaaaaataaataa 1126
>emb|AL353681.8| Human DNA sequence from clone RP1-158P9 on chromosome 1 Contains a novel gene and a pseudogene, complete sequence Length = 113539 Score = 42.1 bits (21), Expect = 0.62 Identities = 24/25 (96%) Strand = Plus / Minus Query: 88 cattaactttgattctttaaaaata 112 |||||| |||||||||||||||||| Sbjct: 23137 cattaattttgattctttaaaaata 23113
>emb|BX897677.1| Neurospora crassa DNA linkage group VI BAC clone B15B10 Length = 77986 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 cccgagagcaaagaggactaa 193 ||||||||||||||||||||| Sbjct: 33299 cccgagagcaaagaggactaa 33279
>gb|AC155841.6| Mus musculus 6 BAC RP24-490O5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 141583 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tgattctttaaaaataaataa 117 ||||||||||||||||||||| Sbjct: 141418 tgattctttaaaaataaataa 141438
>gb|AC153842.9| Mus musculus 6 BAC RP23-348K12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 174100 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tgattctttaaaaataaataa 117 ||||||||||||||||||||| Sbjct: 96869 tgattctttaaaaataaataa 96889
>emb|X91015.1|CCUA1MRN C.carpio Cyca-UA1*01 mRNA MHC class I protein Length = 2050 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tgattctttaaaaataaataa 117 ||||||||||||||||||||| Sbjct: 2000 tgattctttaaaaataaataa 2020
>emb|X91028.1|CCUA1EX48 C.carpio Cyca-UA1*02 gene (exon 4-8) Length = 3356 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tgattctttaaaaataaataa 117 ||||||||||||||||||||| Sbjct: 3220 tgattctttaaaaataaataa 3240
>dbj|AB018581.1| Cyprinus carpio mRNA for MHC class I antigen, complete cds Length = 2179 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tgattctttaaaaataaataa 117 ||||||||||||||||||||| Sbjct: 2152 tgattctttaaaaataaataa 2172
>gb|AC108806.10| Mus musculus chromosome 14, clone RP23-246G7, complete sequence Length = 189619 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 actttgattctttaaaaata 112 |||||||||||||||||||| Sbjct: 73626 actttgattctttaaaaata 73607
>gb|AC139750.3| Mus musculus BAC clone RP24-444K8 from chromosome 17, complete sequence Length = 160413 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ttctttaaaaataaataagt 119 |||||||||||||||||||| Sbjct: 97735 ttctttaaaaataaataagt 97716
>gb|AC006348.3| Homo sapiens PAC clone RP5-876K2 from 7, complete sequence Length = 135883 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ttctttaaaaataaataagt 119 |||||||||||||||||||| Sbjct: 97879 ttctttaaaaataaataagt 97860
>gb|AC163618.4| Mus musculus BAC clone RP24-158G13 from chromosome 3, complete sequence Length = 198108 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 acacaacataaaagtacaaa 149 |||||||||||||||||||| Sbjct: 146274 acacaacataaaagtacaaa 146293
>emb|AL031115.2|HS598A24 Human DNA sequence from clone RP4-598A24 on chromosome Xp11.1-11.23 Contains the ZXDB gene for zinc finger, X-linked, duplicated B and a CpG island, complete sequence Length = 96558 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 95 tttgattctttaaaaataaataag 118 |||| ||||||||||||||||||| Sbjct: 82604 tttgtttctttaaaaataaataag 82581
>emb|X52106.1|NIMIDRPM Neurospora intermedia mitochondrial plasmid DNA for DNA polymerase and RNA polymerase Length = 8642 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 attctttaaaaataaataag 118 |||||||||||||||||||| Sbjct: 6676 attctttaaaaataaataag 6657
>emb|Z99130.1|HS83L6 Human DNA sequence from clone RP1-83L6 on chromosome Xp11.1-11.22, complete sequence Length = 61187 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 95 tttgattctttaaaaataaataag 118 |||| ||||||||||||||||||| Sbjct: 9363 tttgtttctttaaaaataaataag 9386
>emb|AL646051.19| Mouse DNA sequence from clone RP23-222M22 on chromosome 11 Contains the 5' end of the Hs3st3a gene for heparan sulfate (glucosamine) 3-O-sulfotransferase 3A and a CpG island, complete sequence Length = 144847 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 attctttaaaaataaataag 118 |||||||||||||||||||| Sbjct: 15560 attctttaaaaataaataag 15579
>gb|AC097714.3| Homo sapiens BAC clone RP11-324H7 from 4, complete sequence Length = 181756 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ctttgattctttaaaaataa 113 |||||||||||||||||||| Sbjct: 137001 ctttgattctttaaaaataa 136982
>gb|AC110002.2| Homo sapiens chromosome 5 clone RP11-125A13, complete sequence Length = 168708 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 actttgattctttaaaaata 112 |||||||||||||||||||| Sbjct: 83924 actttgattctttaaaaata 83943
>gb|AC008547.6| Homo sapiens chromosome 5 clone CTC-502M5, complete sequence Length = 114005 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 actttgattctttaaaaata 112 |||||||||||||||||||| Sbjct: 39278 actttgattctttaaaaata 39259
>gb|AC026701.6| Homo sapiens chromosome 5 clone CTC-547D20, complete sequence Length = 87338 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 ctttgattctttaaaaataaataa 117 |||||||||||| ||||||||||| Sbjct: 4736 ctttgattcttttaaaataaataa 4713
>gb|AC008525.7|AC008525 Homo sapiens chromosome 5 clone CTC-467M3, complete sequence Length = 123238 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 ctttgattctttaaaaataaataa 117 |||||||||||| ||||||||||| Sbjct: 50657 ctttgattcttttaaaataaataa 50680
>gb|AF332859.1|AF332859S1 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exon 5 and partial cds Length = 270491 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 ttgattctttaaaaataaataagt 119 ||||||||||||||| |||||||| Sbjct: 240268 ttgattctttaaaaaaaaataagt 240291
>gb|AF517943.1| Helobdella robusta hedgehog-like protein (hh) mRNA, complete cds Length = 3480 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 tgaaaagaaaatcgtttgct 74 |||||||||||||||||||| Sbjct: 1993 tgaaaagaaaatcgtttgct 1974
>gb|AC008507.11| Homo sapiens chromosome 19 clone CTC-448F2, complete sequence Length = 179005 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 actttgattctttaaaaata 112 |||||||||||||||||||| Sbjct: 55437 actttgattctttaaaaata 55456
>gb|AC151831.3| Mus musculus BAC clone RP24-81D24 from chromosome 14, complete sequence Length = 212749 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 ggtcattaactttgattctt 104 |||||||||||||||||||| Sbjct: 137969 ggtcattaactttgattctt 137988
>gb|AC015842.9|AC015842 Homo sapiens chromosome 17, clone RP11-350B3, complete sequence Length = 115933 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 attctttaaaaataaataag 118 |||||||||||||||||||| Sbjct: 46208 attctttaaaaataaataag 46227
>emb|CT025686.7| Mouse DNA sequence from clone RP24-273I13 on chromosome 14, complete sequence Length = 186233 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 actttgattctttaaaaata 112 |||||||||||||||||||| Sbjct: 93441 actttgattctttaaaaata 93460
>emb|AL844882.9| Mouse DNA sequence from clone RP23-360H15 on chromosome 2, complete sequence Length = 167978 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 ttaaaaataaataagtccta 123 |||||||||||||||||||| Sbjct: 11896 ttaaaaataaataagtccta 11877
>emb|AL671925.4| Mouse DNA sequence from clone RP23-236O21 on chromosome 4, complete sequence Length = 218429 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 ttaactttgattctttaaaa 109 |||||||||||||||||||| Sbjct: 37961 ttaactttgattctttaaaa 37980
>gb|AC161208.9| Mus musculus chromosome 5, clone RP23-71M14, complete sequence Length = 211079 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 tctttaaaaataaataagtc 120 |||||||||||||||||||| Sbjct: 163896 tctttaaaaataaataagtc 163877
>gb|AC118642.11| Mus musculus chromosome 18, clone RP24-112L21, complete sequence Length = 193995 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 98 gattctttaaaaataaata 116 ||||||||||||||||||| Sbjct: 63833 gattctttaaaaataaata 63851
>gb|AC151754.1| Ornithorhynchus anatinus chromosome UNK clone OABb-469A1, complete sequence Length = 138437 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 attctttaaaaataaataa 117 ||||||||||||||||||| Sbjct: 112642 attctttaaaaataaataa 112660
>ref|XM_639815.1| Dictyostelium discoideum putative polyketide synthase (DDB0230082), partial mRNA Length = 7656 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 96 ttgattctttaaaaataaa 114 ||||||||||||||||||| Sbjct: 1705 ttgattctttaaaaataaa 1687
>gb|AE014832.1| Plasmodium falciparum 3D7 chromosome 10 section 4 of 7 of the complete sequence Length = 258658 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 93 actttgattctttaaaaataaat 115 ||||| ||||||||||||||||| Sbjct: 80979 acttttattctttaaaaataaat 81001
>gb|AC118592.7| Mus musculus chromosome 7, clone RP24-463B5, complete sequence Length = 134114 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 91 taactttgattctttaaaa 109 ||||||||||||||||||| Sbjct: 41836 taactttgattctttaaaa 41818
>gb|AC124339.9| Mus musculus chromosome 7, clone RP24-238P16, complete sequence Length = 163620 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 92 aactttgattctttaaaaa 110 ||||||||||||||||||| Sbjct: 123953 aactttgattctttaaaaa 123971
>gb|AC161226.7| Mus musculus chromosome 3, clone RP23-298B8, complete sequence Length = 200107 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 97 tgattctttaaaaataaat 115 ||||||||||||||||||| Sbjct: 169253 tgattctttaaaaataaat 169271
>gb|BC067913.1| Xenopus tropicalis hypothetical protein MGC69315, mRNA (cDNA clone MGC:69315 IMAGE:5308772), complete cds Length = 1670 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 attctttaaaaataaataa 117 ||||||||||||||||||| Sbjct: 1603 attctttaaaaataaataa 1621
>gb|AC182702.2| Populus trichocarpa clone Pop1-75J20, complete sequence Length = 102031 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 attctttaaaaataaataa 117 ||||||||||||||||||| Sbjct: 22856 attctttaaaaataaataa 22838
>gb|AC147554.2| Mus musculus BAC clone RP24-274B6 from chromosome 7, complete sequence Length = 154146 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 tctttaaaaataaataagt 119 ||||||||||||||||||| Sbjct: 79384 tctttaaaaataaataagt 79366
>gb|AC130714.3| Mus musculus BAC clone RP23-367L18 from chromosome 18, complete sequence Length = 193184 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 attctttaaaaataaataa 117 ||||||||||||||||||| Sbjct: 2270 attctttaaaaataaataa 2252
>gb|BC045608.1| Homo sapiens poly(A) binding protein, cytoplasmic 3, mRNA (cDNA clone MGC:33311 IMAGE:5273503), complete cds Length = 3108 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 21 cttatttattacagcaggaagtc 43 ||||||| ||||||||||||||| Sbjct: 2843 cttatttgttacagcaggaagtc 2821
>gb|AF003383.1| Caenorhabditis elegans cosmid ZC250, complete sequence Length = 34372 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 95 tttgattctttaaaaataa 113 ||||||||||||||||||| Sbjct: 16063 tttgattctttaaaaataa 16081
>gb|AC159271.4| Mus musculus BAC clone RP23-409N21 from chromosome 12, complete sequence Length = 202949 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 tttaaaaataaataagtcc 121 ||||||||||||||||||| Sbjct: 116284 tttaaaaataaataagtcc 116266
>gb|AC117072.3| Dictyostelium discoideum chromosome 2 map 3879572-4071762 strain AX4, complete sequence Length = 192187 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 attctttaaaaataaataa 117 ||||||||||||||||||| Sbjct: 133927 attctttaaaaataaataa 133909
>gb|AF049895.3| Homo sapiens chromosome 8 multiple clones map q21.3, complete sequence Length = 331864 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 100 ttctttaaaaataaataag 118 ||||||||||||||||||| Sbjct: 141867 ttctttaaaaataaataag 141849
>gb|AC131782.3| Mus musculus BAC clone RP24-361A10 from chromosome 12, complete sequence Length = 160872 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 tttaaaaataaataagtcc 121 ||||||||||||||||||| Sbjct: 149229 tttaaaaataaataagtcc 149247
>gb|BC043990.1| Xenopus laevis hypothetical protein MGC64520, mRNA (cDNA clone IMAGE:5570933), partial cds Length = 1259 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 134 aacataaaagtacaaacgg 152 ||||||||||||||||||| Sbjct: 1129 aacataaaagtacaaacgg 1111
>gb|AC103411.8| Rattus norvegicus 15 BAC CH230-7J23 (Children's Hospital Oakland Research Institute) complete sequence Length = 216935 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 100 ttctttaaaaataaataagtcct 122 |||||||||||||||||| |||| Sbjct: 29002 ttctttaaaaataaataattcct 29024
>ref|XM_977407.1| PREDICTED: Mus musculus RIKEN cDNA 5730406M06 gene, transcript variant 1 (5730406M06Rik), mRNA Length = 1222 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 attctttaaaaataaataa 117 ||||||||||||||||||| Sbjct: 1136 attctttaaaaataaataa 1118
>ref|XM_895678.2| PREDICTED: Mus musculus RIKEN cDNA 5730406M06 gene, transcript variant 7 (5730406M06Rik), mRNA Length = 1222 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 attctttaaaaataaataa 117 ||||||||||||||||||| Sbjct: 1136 attctttaaaaataaataa 1118
>gb|AC132084.2| Mus musculus BAC clone RP24-544J20 from chromosome 5, complete sequence Length = 119933 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 tctttaaaaataaataagt 119 ||||||||||||||||||| Sbjct: 116559 tctttaaaaataaataagt 116577
>emb|CR388083.19| Zebrafish DNA sequence from clone DKEY-181J1 in linkage group 8, complete sequence Length = 101219 Score = 38.2 bits (19), Expect = 9.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 87 tcattaactttgattctttaaaaataa 113 ||||||||||| |||| |||||||||| Sbjct: 9784 tcattaactttcattcattaaaaataa 9758
>gb|AC116570.3| Mus musculus BAC clone RP23-93O1 from chromosome 1, complete sequence Length = 213410 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 18 aaacttatttattacagca 36 ||||||||||||||||||| Sbjct: 50645 aaacttatttattacagca 50627
>gb|AC135236.3| Mus musculus BAC clone RP23-228D8 from chromosome 7, complete sequence Length = 186271 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 tctttaaaaataaataagt 119 ||||||||||||||||||| Sbjct: 13515 tctttaaaaataaataagt 13533
>gb|AC126447.3| Mus musculus BAC clone RP23-352G19 from chromosome 5, complete sequence Length = 196904 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 tctttaaaaataaataagt 119 ||||||||||||||||||| Sbjct: 19912 tctttaaaaataaataagt 19930
>gb|AC003009.1|HUAC003009 Homo sapiens Chromosome 16 BAC clone CIT987-SK502C10, complete sequence Length = 152503 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 attctttaaaaataaataa 117 ||||||||||||||||||| Sbjct: 1632 attctttaaaaataaataa 1614
>gb|AC122055.4| Mus musculus BAC clone RP24-465O15 from chromosome 17, complete sequence Length = 159138 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 tctttaaaaataaataagt 119 ||||||||||||||||||| Sbjct: 64203 tctttaaaaataaataagt 64185
>gb|AY160107.1| Dictyostelium discoideum nucleotide exchange factor RasGEF S (gefS) gene, complete cds Length = 6273 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 attctttaaaaataaataa 117 ||||||||||||||||||| Sbjct: 2671 attctttaaaaataaataa 2653
>gb|AC124704.4| Mus musculus BAC clone RP23-480H24 from chromosome 6, complete sequence Length = 185099 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 tctttaaaaataaataagt 119 ||||||||||||||||||| Sbjct: 164978 tctttaaaaataaataagt 164960
>gb|AC087728.3| Papio anubis clone RP41-340H23, complete sequence Length = 198888 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 96 ttgattctttaaaaataaa 114 ||||||||||||||||||| Sbjct: 69306 ttgattctttaaaaataaa 69288
>gb|AC122307.4| Mus musculus BAC clone RP23-287C21 from 12, complete sequence Length = 194202 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 49 agttcttgaaaagaaaatc 67 ||||||||||||||||||| Sbjct: 79289 agttcttgaaaagaaaatc 79307
>gb|BC054277.1| Xenopus laevis hypothetical protein MGC64520, mRNA (cDNA clone MGC:64520 IMAGE:6877780), complete cds Length = 1345 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 134 aacataaaagtacaaacgg 152 ||||||||||||||||||| Sbjct: 1140 aacataaaagtacaaacgg 1122
>gb|AC098723.3| Mus musculus BAC clone RP23-3D10 from 7, complete sequence Length = 227968 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 91 taactttgattctttaaaa 109 ||||||||||||||||||| Sbjct: 51223 taactttgattctttaaaa 51241
>gb|AC153143.4| Mus musculus BAC clone RP23-241N10 from chromosome 13, complete sequence Length = 207860 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 87 tcattaactttgattcttt 105 ||||||||||||||||||| Sbjct: 101516 tcattaactttgattcttt 101498
>gb|AC100092.9| Mus musculus chromosome 3, clone RP23-37H10, complete sequence Length = 186799 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 97 tgattctttaaaaataaat 115 ||||||||||||||||||| Sbjct: 12094 tgattctttaaaaataaat 12112
>gb|AC159272.2| Mus musculus BAC clone RP23-423J20 from chromosome 13, complete sequence Length = 186588 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 94 ctttgattctttaaaaata 112 ||||||||||||||||||| Sbjct: 148714 ctttgattctttaaaaata 148732
>gb|AC144928.17| Medicago truncatula clone mth2-8a18, complete sequence Length = 138948 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 96 ttgattctttaaaaataaa 114 ||||||||||||||||||| Sbjct: 18284 ttgattctttaaaaataaa 18302
>emb|Z81308.2|HS397C4 Human DNA sequence from clone CTA-397C4 on chromosome 22, complete sequence Length = 48349 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 97 tgattctttaaaaataaataagt 119 |||| |||||||||||||||||| Sbjct: 5460 tgatgctttaaaaataaataagt 5438
>emb|AL603756.8| Human DNA sequence from clone RP11-338I21 on chromosome 10 Contains the GHITM gene for growth hormone inducible transmembrane protein and a CpG island, complete sequence Length = 34753 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 tctttaaaaataaataagt 119 ||||||||||||||||||| Sbjct: 28421 tctttaaaaataaataagt 28403
>emb|AL589943.26| Human DNA sequence from clone RP11-44D23 on chromosome 10, complete sequence Length = 139325 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 attctttaaaaataaataa 117 ||||||||||||||||||| Sbjct: 98134 attctttaaaaataaataa 98152
>emb|AL590097.16| Human DNA sequence from clone RP11-117C7 on chromosome X Contains part of the HTR2C gene for 5-hydroxytryptamine (serotonin) receptor 2C, complete sequence Length = 104773 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 45 ccatagttcttgaaaagaa 63 ||||||||||||||||||| Sbjct: 73706 ccatagttcttgaaaagaa 73688
>emb|AL590727.5| Human DNA sequence from clone RP11-111D3 on chromosome 6 Contains a eukaryotic translation initiation factor 4E binding protein pseudogene and part of a novel gene, complete sequence Length = 127913 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 97 tgattctttaaaaataaat 115 ||||||||||||||||||| Sbjct: 48866 tgattctttaaaaataaat 48884
>emb|AL512274.9| Human DNA sequence from clone RP11-7K24 on chromosome 6 Contains the 3' end of the gene for a novel protein similar to prodos protein, the gene for a novel protein and a CpG island, complete sequence Length = 79319 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 92 aactttgattctttaaaaa 110 ||||||||||||||||||| Sbjct: 4887 aactttgattctttaaaaa 4905
>emb|AL451132.9| Human DNA sequence from clone RP11-7N10 on chromosome 9 Contains a pseudogene similar to part of serine/threonine kinase 33 (STK33), complete sequence Length = 69362 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 92 aactttgattctttaaaaa 110 ||||||||||||||||||| Sbjct: 32148 aactttgattctttaaaaa 32130
>emb|AL441886.18| Human DNA sequence from clone RP11-287G8 on chromosome 10 Contains the 5'end of gene KIAA1010, the 3'end of gene FLJ40792, the CPN1 gene for carboxypeptidase N, polypeptide 1, 50 kD and a CpG island, complete sequence Length = 135932 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 90 ttaactttgattctttaaaaata 112 |||||||||||| |||||||||| Sbjct: 24315 ttaactttgattgtttaaaaata 24337
>emb|AL359757.21| Human DNA sequence from clone RP11-165I9 on chromosome 13q12.11-12.3 Contains the PABPC3 gene for poly(A) binding protein, cytoplasmic 3, the gene for a novel protein (FLJ30487), a pseudogene similar to part of 60S ribosomal protein L23a (RPL23A), 4 novel genes and 4 CpG islands, complete sequence Length = 187066 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 21 cttatttattacagcaggaagtc 43 ||||||| ||||||||||||||| Sbjct: 69345 cttatttgttacagcaggaagtc 69323
>emb|AL160033.21| Human DNA sequence from clone RP11-480K16 on chromosome 13 Contains the 5' end of a novel gene, a novel gene, the 3' end of the TUBGCP3 gene for tubulin gamma complex associated protein 3 and two CpG islands, complete sequence Length = 182362 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 ttaactttgattctttaaa 108 ||||||||||||||||||| Sbjct: 60193 ttaactttgattctttaaa 60211
>emb|AL162384.14| Human DNA sequence from clone RP11-218I7 on chromosome 9 Contains a novel gene similar to RAN binding protein 6 (RANBP6), the 5' end of a novel gene, a novel gene and a CpG island, complete sequence Length = 68465 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 tctttaaaaataaataagt 119 ||||||||||||||||||| Sbjct: 29292 tctttaaaaataaataagt 29274
>emb|AL159980.14| Human DNA sequence from clone RP11-56M2 on chromosome 13 Contains a histone pseudogene, complete sequence Length = 162044 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 tctttaaaaataaataagt 119 ||||||||||||||||||| Sbjct: 96564 tctttaaaaataaataagt 96546
>emb|AL139092.12| Human DNA sequence from clone RP11-420G6 on chromosome 6 Contains the gene for werners helicase interacting protein (WHIP) (RUVBL), the SERPINB1 gene for serine (or cysteine) proteinase inhibitor clade B (ovalbumin) member 1, a putative novel gene and the 3' end of a putative novel gene, complete sequence Length = 168147 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 95 tttgattctttaaaaataa 113 ||||||||||||||||||| Sbjct: 92611 tttgattctttaaaaataa 92629
>emb|AL031782.1|HS708F5 Human DNA sequence from clone RP4-708F5 on chromosome 6p11.2-12.3 Contains part of the COL21A1 gene for collagen, type XXI, alpha 1 (collagen XXI, collagen, type XX, alpha 1, COLA1L, COL20A1, DKFZp564B052), complete sequence Length = 126501 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 attctttaaaaataaataa 117 ||||||||||||||||||| Sbjct: 64479 attctttaaaaataaataa 64497
>emb|AL024458.1|HS344I7 Human DNA sequence from clone RP3-344I7 on chromosome Xp11.21-11.3 Contains a keratin 8 (KRT8) pseudogene, complete sequence Length = 99848 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 9 aaacagagtaaacttattt 27 ||||||||||||||||||| Sbjct: 34892 aaacagagtaaacttattt 34874
>emb|BX572094.1| Prochlorococcus marinus MED4 complete genome; segment 5/5 Length = 262202 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 95 tttgattctttaaaaataa 113 ||||||||||||||||||| Sbjct: 200655 tttgattctttaaaaataa 200673
>gb|BC074095.1| Danio rerio major histocompatibility complex class I UBA gene, mRNA (cDNA clone MGC:91955 IMAGE:7041416), complete cds Length = 1905 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 95 tttgattctttaaaaataaataa 117 ||||||||||| ||||||||||| Sbjct: 1846 tttgattcttttaaaataaataa 1868
>gb|AC162891.6| Mus musculus chromosome 1, clone RP24-263F3, complete sequence Length = 148545 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 tctttaaaaataaataagt 119 ||||||||||||||||||| Sbjct: 13639 tctttaaaaataaataagt 13621
>emb|BX914219.10| Zebrafish DNA sequence from clone DKEY-88A11 in linkage group 13, complete sequence Length = 126004 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 attctttaaaaataaataa 117 ||||||||||||||||||| Sbjct: 103903 attctttaaaaataaataa 103885
>gb|AC123779.5| Homo sapiens chromosome 8, clone RP11-687D20, complete sequence Length = 168640 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 100 ttctttaaaaataaataag 118 ||||||||||||||||||| Sbjct: 25488 ttctttaaaaataaataag 25470
>gb|AC107909.5| Homo sapiens chromosome 8, clone CTD-2340D6, complete sequence Length = 149001 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 95 tttgattctttaaaaataaataa 117 |||||||||||||||||| |||| Sbjct: 76252 tttgattctttaaaaatacataa 76274
>gb|AC105195.5| Homo sapiens chromosome 8, clone RP11-480J6, complete sequence Length = 167834 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 95 tttgattctttaaaaataaataa 117 |||||||||||||||||| |||| Sbjct: 43683 tttgattctttaaaaatacataa 43705
>emb|BX950856.4| Zebrafish DNA sequence from clone DKEY-205L20 in linkage group 5, complete sequence Length = 147456 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 attctttaaaaataaataa 117 ||||||||||||||||||| Sbjct: 120132 attctttaaaaataaataa 120114
>gb|AC182461.3| Pan troglodytes BAC clone CH251-673H10 from chromosome 6, complete sequence Length = 188415 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 95 tttgattctttaaaaataaataa 117 |||| |||||||||||||||||| Sbjct: 71911 tttgcttctttaaaaataaataa 71933
>gb|AC105416.3| Homo sapiens BAC clone RP11-310A13 from 4, complete sequence Length = 123331 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 attctttaaaaataaataa 117 ||||||||||||||||||| Sbjct: 60886 attctttaaaaataaataa 60904
>gb|AC098687.3| Bos taurus clone rp42-194o5, complete sequence Length = 156543 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 131 cacaacataaaagtacaaa 149 ||||||||||||||||||| Sbjct: 17449 cacaacataaaagtacaaa 17431
>emb|BX323032.6| Zebrafish DNA sequence from clone DKEYP-7C3 in linkage group 2, complete sequence Length = 167106 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 attctttaaaaataaataa 117 ||||||||||||||||||| Sbjct: 50056 attctttaaaaataaataa 50038
>gb|AC044782.6| Homo sapiens chromosome 10 clone RP11-170M17, complete sequence Length = 149041 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 100 ttctttaaaaataaataag 118 ||||||||||||||||||| Sbjct: 59212 ttctttaaaaataaataag 59194
>gb|AC069020.8| Homo sapiens chromosome 10 clone RP11-165K20, complete sequence Length = 171413 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 attctttaaaaataaataa 117 ||||||||||||||||||| Sbjct: 41310 attctttaaaaataaataa 41292
>gb|AC069543.5| Homo sapiens chromosome 10 clone RP11-393H5, complete sequence Length = 179789 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 100 ttctttaaaaataaataag 118 ||||||||||||||||||| Sbjct: 148114 ttctttaaaaataaataag 148132
>ref|NM_057377.3| Drosophila melanogaster seven in absentia CG9949-RA, transcript variant A (sina), mRNA Length = 4435 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 89 attaactttgattctttaaaaat 111 |||||||||||| |||||||||| Sbjct: 811 attaactttgatcctttaaaaat 833
>gb|AF438327.1| Homo sapiens alpha 1 type XXI collagen precursor (COL21A1) gene, complete cds, alternatively spliced Length = 381696 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 attctttaaaaataaataa 117 ||||||||||||||||||| Sbjct: 212830 attctttaaaaataaataa 212812
>gb|AC093900.3| Homo sapiens BAC clone RP11-730E1 from 4, complete sequence Length = 152581 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 54 ttgaaaagaaaatcgtttg 72 ||||||||||||||||||| Sbjct: 66796 ttgaaaagaaaatcgtttg 66814
>gb|AC010751.5| Drosophila melanogaster 3L BAC RP98-9A23 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181437 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 89 attaactttgattctttaaaaat 111 |||||||||||| |||||||||| Sbjct: 64090 attaactttgatcctttaaaaat 64068
>gb|AC093505.2| Homo sapiens chromosome 5 clone CTD-2010M15, complete sequence Length = 131489 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 tctttaaaaataaataagt 119 ||||||||||||||||||| Sbjct: 113540 tctttaaaaataaataagt 113558
>emb|BX005461.8| Zebrafish DNA sequence from clone DKEY-192L18 in linkage group 24, complete sequence Length = 162216 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 83 caggtcattaactttgattcttt 105 ||||||||||||||||| ||||| Sbjct: 9066 caggtcattaactttgactcttt 9044
>ref|XM_626529.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd2_3390), partial mRNA Length = 495 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 96 ttgattctttaaaaataaa 114 ||||||||||||||||||| Sbjct: 461 ttgattctttaaaaataaa 479
>gb|AC131708.3| Mus musculus BAC clone RP24-127P5 from chromosome 6, complete sequence Length = 185214 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 tctttaaaaataaataagt 119 ||||||||||||||||||| Sbjct: 179292 tctttaaaaataaataagt 179310
>gb|AC149085.6| Mus musculus BAC clone RP23-191I16 from chromosome 7, complete sequence Length = 208232 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 attctttaaaaataaataa 117 ||||||||||||||||||| Sbjct: 120771 attctttaaaaataaataa 120789
>dbj|AK081407.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130014L03 product:RIKEN cDNA 5730406M06 gene, full insert sequence Length = 3470 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 attctttaaaaataaataa 117 ||||||||||||||||||| Sbjct: 907 attctttaaaaataaataa 889
>gb|L40494.1|GESPLA Gelasinospora sp. G114 mitochondrial plasmid Gel-kalDNA ORF1 and ORF2 genes, complete cds Length = 8231 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 attctttaaaaataaataa 117 ||||||||||||||||||| Sbjct: 6493 attctttaaaaataaataa 6475
>gb|AC078918.10|AC078918 Homo sapiens 3 BAC RP11-696F10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 76288 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 cttatttattacagcagga 39 ||||||||||||||||||| Sbjct: 11109 cttatttattacagcagga 11127
>gb|AC008604.5|AC008604 Homo sapiens chromosome 5 clone CTB-109F8, complete sequence Length = 108976 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 tctttaaaaataaataagt 119 ||||||||||||||||||| Sbjct: 36444 tctttaaaaataaataagt 36426
>gb|AC117176.2| Dictyostelium discoideum chromosome 2 map 5018074-5200947 strain AX4, complete sequence Length = 182871 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 96 ttgattctttaaaaataaa 114 ||||||||||||||||||| Sbjct: 127137 ttgattctttaaaaataaa 127119
>gb|AC115682.2| Dictyostelium discoideum chromosome 2 map 4101105-4158643 strain AX4, complete sequence Length = 57538 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 attctttaaaaataaataa 117 ||||||||||||||||||| Sbjct: 35309 attctttaaaaataaataa 35291
>ref|NM_213698.1| Xenopus tropicalis hypothetical protein MGC69315 (MGC69315), mRNA Length = 1670 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 attctttaaaaataaataa 117 ||||||||||||||||||| Sbjct: 1603 attctttaaaaataaataa 1621
>gb|AC147220.3| Mus musculus BAC clone RP23-51A20 from chromosome 18, complete sequence Length = 208705 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 attctttaaaaataaataa 117 ||||||||||||||||||| Sbjct: 72008 attctttaaaaataaataa 72026
>gb|AC013453.1|AC013453 Arabidopsis thaliana chromosome I BAC T16N11 genomic sequence, complete sequence Length = 91001 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 95 tttgattctttaaaaataaataa 117 |||||||||||||||||| |||| Sbjct: 79441 tttgattctttaaaaatatataa 79419
>dbj|BA000003.2| Buchnera aphidicola str. APS (Acyrthosiphon pisum) genomic DNA, complete sequence Length = 640681 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 96 ttgattctttaaaaataaa 114 ||||||||||||||||||| Sbjct: 248170 ttgattctttaaaaataaa 248152
>emb|BX005447.8| Zebrafish DNA sequence from clone DKEY-29B14, complete sequence Length = 283185 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 57 aaaagaaaatcgtttgctc 75 ||||||||||||||||||| Sbjct: 192526 aaaagaaaatcgtttgctc 192544
>emb|BX088551.7| Zebrafish DNA sequence from clone CH211-106A19 in linkage group 5, complete sequence Length = 184417 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 57 aaaagaaaatcgtttgctc 75 ||||||||||||||||||| Sbjct: 57768 aaaagaaaatcgtttgctc 57750
>dbj|BS000122.1| Pan troglodytes chromosome 22 clone:PTB-105K10, map 22, complete sequences Length = 82010 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 132 acaacataaaagtacaaac 150 ||||||||||||||||||| Sbjct: 18426 acaacataaaagtacaaac 18408
>dbj|BS000153.1| Pan troglodytes chromosome 22 clone:RP43-069E18, map 22, complete sequences Length = 194937 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 132 acaacataaaagtacaaac 150 ||||||||||||||||||| Sbjct: 11744 acaacataaaagtacaaac 11726
>emb|AL928736.5| Zebrafish DNA sequence from clone CH211-202D20, complete sequence Length = 186742 Score = 38.2 bits (19), Expect = 9.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 87 tcattaactttgattctttaaaaataa 113 ||||||||||| |||| |||||||||| Sbjct: 30723 tcattaactttcattcattaaaaataa 30697
>gb|U91319.1|HSU91319 Human chromosome 16p13.11 BAC clone CIT987SK-98H8 complete sequence Length = 125630 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 attctttaaaaataaataa 117 ||||||||||||||||||| Sbjct: 8834 attctttaaaaataaataa 8852
>gb|AC123920.4| Mus musculus BAC clone RP24-130L14 from 13, complete sequence Length = 170268 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 94 ctttgattctttaaaaata 112 ||||||||||||||||||| Sbjct: 48182 ctttgattctttaaaaata 48200
>emb|AL845510.8| Zebrafish DNA sequence from clone BUSM1-132M23 in linkage group 7, complete sequence Length = 101241 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 attctttaaaaataaataa 117 ||||||||||||||||||| Sbjct: 14089 attctttaaaaataaataa 14071
>emb|BX510994.6| Zebrafish DNA sequence from clone CH211-51F10 in linkage group 19, complete sequence Length = 186973 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 95 tttgattctttaaaaataaataa 117 ||||||||||| ||||||||||| Sbjct: 40201 tttgattcttttaaaataaataa 40223
>gb|AC006933.3|AC006933 Drosophila melanogaster, chromosome 3L, region 73B7-73D6, BAC clone BACR48E21, complete sequence Length = 186002 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 89 attaactttgattctttaaaaat 111 |||||||||||| |||||||||| Sbjct: 46582 attaactttgatcctttaaaaat 46560
>gb|AE003526.4| Drosophila melanogaster chromosome 3L, section 59 of 83 of the complete sequence Length = 281100 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 89 attaactttgattctttaaaaat 111 |||||||||||| |||||||||| Sbjct: 269512 attaactttgatcctttaaaaat 269534
>gb|AC149277.11| Mus musculus BAC clone RP24-213J23 from chromosome 7, complete sequence Length = 198579 Score = 38.2 bits (19), Expect = 9.6 Identities = 26/27 (96%), Gaps = 1/27 (3%) Strand = Plus / Plus Query: 99 attctttaaaaataaa-taagtcctag 124 |||||||||||||||| |||||||||| Sbjct: 188018 attctttaaaaataaattaagtcctag 188044
>gb|AF068862.1|AF068862 Homo sapiens BAC clone 157K21 from 8q21, complete sequence Length = 77425 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 100 ttctttaaaaataaataag 118 ||||||||||||||||||| Sbjct: 53559 ttctttaaaaataaataag 53541
>gb|AY391782.2| Ctenopharyngodon idella MHC class I antigen mRNA, complete cds Length = 2033 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 95 tttgattctttaaaaataaataa 117 |||||||||| |||||||||||| Sbjct: 1960 tttgattcttgaaaaataaataa 1982
>gb|AC140948.1| Gallus gallus BAC clone TAM31-60A4 from chromosome ul, complete sequence Length = 91737 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 attctttaaaaataaataa 117 ||||||||||||||||||| Sbjct: 1192 attctttaaaaataaataa 1174
>gb|AC133709.11| Medicago truncatula clone mth2-7b3, complete sequence Length = 138950 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 96 ttgattctttaaaaataaa 114 ||||||||||||||||||| Sbjct: 120666 ttgattctttaaaaataaa 120648
>gb|U17243.1|YSCL8003 Saccharomyces cerevisiae chromosome XII cosmid 8003 Length = 40214 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 96 ttgattctttaaaaataaa 114 ||||||||||||||||||| Sbjct: 28294 ttgattctttaaaaataaa 28276
>emb|CR940308.12| M.truncatula DNA sequence from clone MTH2-17G23 on chromosome 3, complete sequence Length = 121494 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 96 ttgattctttaaaaataaa 114 ||||||||||||||||||| Sbjct: 85722 ttgattctttaaaaataaa 85704
>gb|AC159308.4| Mus musculus BAC clone RP23-187B11 from chromosome 9, complete sequence Length = 217927 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 attctttaaaaataaataa 117 ||||||||||||||||||| Sbjct: 156379 attctttaaaaataaataa 156361
>dbj|AP006382.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT32J05, TM0238, complete sequence Length = 131947 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 accaaacagagtaaactta 24 ||||||||||||||||||| Sbjct: 77848 accaaacagagtaaactta 77866
>gb|AC165414.9| Mus musculus chromosome 8, clone RP23-424A21, complete sequence Length = 192707 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 tctttaaaaataaataagt 119 ||||||||||||||||||| Sbjct: 30653 tctttaaaaataaataagt 30635
>emb|AL929083.8| Mouse DNA sequence from clone RP23-436E15 on chromosome 2, complete sequence Length = 84875 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 98 gattctttaaaaataaata 116 ||||||||||||||||||| Sbjct: 32800 gattctttaaaaataaata 32818
>emb|AL772187.6| Mouse DNA sequence from clone RP23-38K18 on chromosome 4, complete sequence Length = 230409 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 attctttaaaaataaataa 117 ||||||||||||||||||| Sbjct: 140973 attctttaaaaataaataa 140955
>emb|AL928741.2| Mouse DNA sequence from clone RP23-264P3 on chromosome 2, complete sequence Length = 185830 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 93 actttgattctttaaaaat 111 ||||||||||||||||||| Sbjct: 168517 actttgattctttaaaaat 168499
>emb|AL671866.8| Mouse DNA sequence from clone RP23-59L24 on chromosome 4, complete sequence Length = 230447 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 tctttaaaaataaataagt 119 ||||||||||||||||||| Sbjct: 179635 tctttaaaaataaataagt 179617
>gb|AC167139.9| Mus musculus chromosome 1, clone RP23-397C14, complete sequence Length = 198105 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 tctttaaaaataaataagt 119 ||||||||||||||||||| Sbjct: 37222 tctttaaaaataaataagt 37240
>gb|AY863213.1| Smittium culisetae mitochondrion, complete genome Length = 58654 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 93 actttgattctttaaaaataaat 115 ||||||||| ||||||||||||| Sbjct: 50229 actttgattatttaaaaataaat 50207
>gb|M38384.1|DROSINA Drosophila melanogaster seven in absentia mRNA, complete cds Length = 4440 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 89 attaactttgattctttaaaaat 111 |||||||||||| |||||||||| Sbjct: 811 attaactttgatcctttaaaaat 833
>dbj|AP004294.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1651H12 Length = 180236 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 95 tttgattctttaaaaataaataa 117 |||||||||||||||||| |||| Sbjct: 114257 tttgattctttaaaaatacataa 114279 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,400,075 Number of Sequences: 3902068 Number of extensions: 3400075 Number of successful extensions: 318124 Number of sequences better than 10.0: 155 Number of HSP's better than 10.0 without gapping: 154 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 317407 Number of HSP's gapped (non-prelim): 718 length of query: 194 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 172 effective length of database: 17,147,199,772 effective search space: 2949318360784 effective search space used: 2949318360784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
