>LEF4_NPVAC (P41477) Late expression factor 4|
          Length = 464

 Score = 31.6 bits (70), Expect = 0.97
 Identities = 24/89 (26%), Positives = 40/89 (44%)
 Frame = +3

Query: 33  KVSYYNNFSS*LYPQDFLHHVLNMYIIDNTRILQRYTYSYKKKNWCFSRTQ*SC*CYLAT 212
           ++SY  NFS     QD L+ +LN YI+ N  + Q+Y   Y +  +              T
Sbjct: 11  EISYSINFS-----QDLLYKILNSYIVPNYSLAQQYFDLYDENGF-------------RT 52

Query: 213 RLA*QHVKTDLLEQLVHTH*KKKLKMLIW 299
           R+  Q    +++  +  T+ K K K + W
Sbjct: 53  RIPIQSACNNIISSVKKTNSKHK-KFVYW 80

>RT27_HUMAN (Q92552) Mitochondrial 28S ribosomal protein S27 (S27mt) (MRP-S27)|
          Length = 414

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = -1

Query: 444 SLVGEVGLQCGLGRMHRNLPAFWYPCY 364
           +L+G+V LQ GL  ++ N+P  W P Y
Sbjct: 229 ALLGKVELQQGLRAVYHNMPLIWKPGY 255

>SYV_DESPS (Q6AMA0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 887

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
 Frame = -3

Query: 382 ILVPMLSGYWLVMSRPTLVVLVEAPVDTQINI-----FNFFFQWV 263
           ++ P  S  W V  +P     V+A  D QINI     +N F+ W+
Sbjct: 354 VIEPTTSLQWFVSVKPLAAKAVDAVRDGQINIYPKTWYNTFYSWM 398

>SYA_MYCMS (P61704) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 896

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = -2

Query: 422 CNADLEECI-EISRHSGTHVIRLLVSDVAAHIGSSCGSSG*YPDQH 288
           C  D E+ I  +  HSGTH+I   + +V   +G+S   SG Y D++
Sbjct: 560 CRVDEEKRIYTMKNHSGTHMIHYALREV---LGTSVMQSGSYNDEN 602


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,868,122
Number of Sequences: 219361
Number of extensions: 1204467
Number of successful extensions: 2805
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2803
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)