ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl40h11 |
|---|---|
| Clone Library Name | barley_pub |
>SYGM2_ARATH (Q8L785) Glycyl-tRNA synthetase 2, chloroplast/mitochondrial| precursor (EC 6.1.1.14) (Glycine--tRNA ligase 2) (GlyRS 2) Length = 1067 Score = 103 bits (258), Expect = 1e-22 Identities = 44/78 (56%), Positives = 61/78 (78%) Frame = -3 Query: 433 EKALWSAYLEVANKIHPGVDVKTFAESSLLLIQPLEDFFNNVFVMAEDEKIRNNRLALLQ 254 E+ LWS Y + ++IH G++++ F E S+ L++PLEDFFNNVFVM E+E++R NRLALL Sbjct: 990 ERTLWSTYTSIKDRIHTGIEIEDFTEISMQLVEPLEDFFNNVFVMVEEERVRKNRLALLN 1049 Query: 253 KVASLTKGIADLSVLPGF 200 +A+L KG+ DLS LPGF Sbjct: 1050 NIANLPKGVIDLSFLPGF 1067
>SYGB_HAEIN (P43822) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 688 Score = 52.4 bits (124), Expect = 5e-07 Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%) Frame = -3 Query: 433 EKALWSAYLEVANKIHPGV---DVKTFAESSLLLIQPLEDFFNNVFVMAEDEKIRNNRLA 263 EKAL A L + ++ P + D T + L P++ FF+NV V AED +R NRLA Sbjct: 610 EKALAEAVLALRTEVQPLIAQGDYTTVLDKLANLRAPVDSFFDNVMVNAEDPALRQNRLA 669 Query: 262 LLQKVASLTKGIADLSVL 209 +L + L +AD+SVL Sbjct: 670 ILNTLQGLFLQVADISVL 687
>SYGB_HAEAE (O30836) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) (Fragment) Length = 285 Score = 52.4 bits (124), Expect = 5e-07 Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%) Frame = -3 Query: 433 EKALWSAYLEVANKIHPGV---DVKTFAESSLLLIQPLEDFFNNVFVMAEDEKIRNNRLA 263 EKAL A L + ++ P + D T + L P++ FF+NV V AED +R NRLA Sbjct: 207 EKALAEAVLALRTEVQPLIEQGDYTTVLDKLANLRAPVDSFFDNVMVNAEDPALRQNRLA 266 Query: 262 LLQKVASLTKGIADLSVL 209 +L + L +AD+SVL Sbjct: 267 ILNTLQGLFLQVADISVL 284
>SYGB_VIBCH (Q9KVW8) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 688 Score = 51.6 bits (122), Expect = 8e-07 Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 3/78 (3%) Frame = -3 Query: 433 EKALWSAYLEVANKIHPGVDVKTFAESSLLLI---QPLEDFFNNVFVMAEDEKIRNNRLA 263 EKAL A +A + P + E+ L P++ FF+NV VMA+DE ++ NRL Sbjct: 609 EKALAEAVEIMAEALEPAFATGNYQEALSKLAGLRAPVDAFFDNVMVMADDEALKKNRLT 668 Query: 262 LLQKVASLTKGIADLSVL 209 LL K+ +L IAD+S+L Sbjct: 669 LLNKLRNLFLQIADISLL 686
>SYGB_PSEPK (Q88RR9) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 684 Score = 50.4 bits (119), Expect = 2e-06 Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 3/78 (3%) Frame = -3 Query: 433 EKALWSAYLEVANKIHPGVDVKTFAESSLLLI---QPLEDFFNNVFVMAEDEKIRNNRLA 263 E +L+SA + + P + ++ES L P++ FF V V AED K+R NR A Sbjct: 606 EFSLYSAIQQADQAVQPMAAARQYSESLARLAALRDPVDAFFEAVMVNAEDAKVRANRYA 665 Query: 262 LLQKVASLTKGIADLSVL 209 LL ++ L G+AD+S+L Sbjct: 666 LLSRLRGLFLGVADISLL 683
>SYGB_PSESM (Q88B35) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 684 Score = 49.3 bits (116), Expect = 4e-06 Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 3/78 (3%) Frame = -3 Query: 433 EKALWSAYLEVANKIHPGVDVKTFAESSL---LLIQPLEDFFNNVFVMAEDEKIRNNRLA 263 E +L+SA + + + P + ++ES +L +P++ FF V V AED +R NR A Sbjct: 606 EFSLYSAIQQADHAVQPMAAERQYSESLARLAMLREPVDAFFEAVMVNAEDANVRANRYA 665 Query: 262 LLQKVASLTKGIADLSVL 209 LL ++ L G+AD+S+L Sbjct: 666 LLARLRGLFLGVADISLL 683
>SYGB_VIBPA (Q87TP8) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 688 Score = 48.5 bits (114), Expect = 7e-06 Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 3/78 (3%) Frame = -3 Query: 433 EKALWSAYLEVANKIHPGVDVKTFAESSLLLI---QPLEDFFNNVFVMAEDEKIRNNRLA 263 EKAL + + + P + E+ L +P++ FF+NV VMA+DE ++ NRL Sbjct: 609 EKALAESVEVMTEALEPAFATGNYQEALSKLADLREPVDAFFDNVMVMADDEALKKNRLT 668 Query: 262 LLQKVASLTKGIADLSVL 209 LL + +L IAD+S+L Sbjct: 669 LLNNLRNLFLQIADISLL 686
>SYGB_LACLA (Q9CGK0) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 673 Score = 48.1 bits (113), Expect = 9e-06 Identities = 27/75 (36%), Positives = 44/75 (58%) Frame = -3 Query: 433 EKALWSAYLEVANKIHPGVDVKTFAESSLLLIQPLEDFFNNVFVMAEDEKIRNNRLALLQ 254 E+AL++ + + N+ + F L +E FF +V VMAED +R+NR+ALL Sbjct: 596 EEALYNVVISLQNQWTYMPGEEKFRAIVHSLAPAIETFFESVMVMAEDLSVRDNRIALLS 655 Query: 253 KVASLTKGIADLSVL 209 +V +LT +AD S++ Sbjct: 656 EVVALTSVMADFSLI 670
>SYGB_AQUAE (O67898) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 664 Score = 48.1 bits (113), Expect = 9e-06 Identities = 30/73 (41%), Positives = 46/73 (63%) Frame = -3 Query: 433 EKALWSAYLEVANKIHPGVDVKTFAESSLLLIQPLEDFFNNVFVMAEDEKIRNNRLALLQ 254 E+ L+ E NK ++K+ E L L + ++ FF+NV VMAEDEKIRNNR++LL+ Sbjct: 591 ERELYQKLTEFENK-----ELKSPLEL-LPLKEYIDKFFDNVKVMAEDEKIRNNRISLLK 644 Query: 253 KVASLTKGIADLS 215 +V +L + D + Sbjct: 645 RVENLFRTFGDFN 657
>SYGB_NEIGO (Q50945) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) (Fragment) Length = 126 Score = 47.4 bits (111), Expect = 2e-05 Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 3/78 (3%) Frame = -3 Query: 433 EKALWSAYLEVANKIHPGVDVKTF--AESSLLLIQPLED-FFNNVFVMAEDEKIRNNRLA 263 EKAL++A + KI V F A S L ++P D FF+ V VMAED ++ NRL Sbjct: 47 EKALYAAAQGLQPKIAAAVAEGNFRTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLN 106 Query: 262 LLQKVASLTKGIADLSVL 209 LL ++A +AD+++L Sbjct: 107 LLNRLAEQMNAVADIALL 124
>SYGB_NEIMB (Q9JXQ5) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 687 Score = 47.0 bits (110), Expect = 2e-05 Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 3/78 (3%) Frame = -3 Query: 433 EKALWSAYLEVANKIHPGVDVKTF--AESSLLLIQPLED-FFNNVFVMAEDEKIRNNRLA 263 EKAL++A + KI V F A S L ++P D FF+ V VMAED ++ NRL Sbjct: 608 EKALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLN 667 Query: 262 LLQKVASLTKGIADLSVL 209 LL ++A +AD+++L Sbjct: 668 LLNRLAEQMNAVADIALL 685
>SYGB_NEIMA (Q9JW67) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 687 Score = 47.0 bits (110), Expect = 2e-05 Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 3/78 (3%) Frame = -3 Query: 433 EKALWSAYLEVANKIHPGVDVKTF--AESSLLLIQPLED-FFNNVFVMAEDEKIRNNRLA 263 EKAL++A + KI V F A S L ++P D FF+ V VMAED ++ NRL Sbjct: 608 EKALFAAAQGLQPKIAAAVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLN 667 Query: 262 LLQKVASLTKGIADLSVL 209 LL ++A +AD+++L Sbjct: 668 LLNRLAEQMNAVADIALL 685
>SYGB_VIBVY (Q7MQI8) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 693 Score = 47.0 bits (110), Expect = 2e-05 Identities = 22/45 (48%), Positives = 33/45 (73%) Frame = -3 Query: 343 LIQPLEDFFNNVFVMAEDEKIRNNRLALLQKVASLTKGIADLSVL 209 L +P++ FF+NV VMA+DE ++ NRL LL + +L IAD+S+L Sbjct: 647 LREPVDAFFDNVMVMADDEALKTNRLTLLNNLRNLFLQIADISLL 691
>SYGB_VIBVU (Q8DDJ7) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 693 Score = 47.0 bits (110), Expect = 2e-05 Identities = 22/45 (48%), Positives = 33/45 (73%) Frame = -3 Query: 343 LIQPLEDFFNNVFVMAEDEKIRNNRLALLQKVASLTKGIADLSVL 209 L +P++ FF+NV VMA+DE ++ NRL LL + +L IAD+S+L Sbjct: 647 LREPVDAFFDNVMVMADDEALKTNRLTLLNNLRNLFLQIADISLL 691
>SYGB_HAEDU (Q7VKG6) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 688 Score = 47.0 bits (110), Expect = 2e-05 Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 3/78 (3%) Frame = -3 Query: 433 EKALWSAYLEVANKIHPGVDVKTFAESSLLLIQ---PLEDFFNNVFVMAEDEKIRNNRLA 263 E+AL A L + +++ P + + L P+++FF++V V AED +R NRLA Sbjct: 610 ERALAEAVLALKDEVRPLIAKANYTAVLTQLANLRTPVDNFFDHVMVNAEDPSLRQNRLA 669 Query: 262 LLQKVASLTKGIADLSVL 209 +L + SL +AD+S+L Sbjct: 670 ILSTLQSLFLEVADISLL 687
>SYGB_COXBU (P45651) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 689 Score = 46.6 bits (109), Expect = 3e-05 Identities = 24/66 (36%), Positives = 37/66 (56%) Frame = -3 Query: 406 EVANKIHPGVDVKTFAESSLLLIQPLEDFFNNVFVMAEDEKIRNNRLALLQKVASLTKGI 227 E+ N ++ D L +P++ FF+ V VM +D++ R NRLALL + L I Sbjct: 623 ELVNNLYKKADYTKALSELASLKEPIDIFFDKVMVMVDDKEKRENRLALLSSLQQLFSQI 682 Query: 226 ADLSVL 209 AD+S+L Sbjct: 683 ADISLL 688
>SYGB_RHILO (Q986B5) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 718 Score = 46.2 bits (108), Expect = 3e-05 Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%) Frame = -3 Query: 433 EKALWSAYLEVANKIHPGVDVKTFAESSLLLI---QPLEDFFNNVFVMAEDEKIRNNRLA 263 EK+L++A + + + + F+ + L L +P++ FF V V ED ++R NRLA Sbjct: 639 EKSLFAAVNQAEKQAGEAIQNEDFSAAMLALSALREPVDSFFEGVLVNDEDLEVRANRLA 698 Query: 262 LLQKVASLTKGIADLSVLPG 203 LL ++ + T +AD S + G Sbjct: 699 LLTRIRAATGQVADFSKIAG 718
>SYGB_STRP6 (Q5XAJ6) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 679 Score = 44.7 bits (104), Expect = 1e-04 Identities = 22/50 (44%), Positives = 31/50 (62%) Frame = -3 Query: 358 ESSLLLIQPLEDFFNNVFVMAEDEKIRNNRLALLQKVASLTKGIADLSVL 209 E +L + DFF+N VMAED+ ++NNRLA+L + S K IA + L Sbjct: 627 EQVFVLSPVINDFFDNTMVMAEDQALKNNRLAILSDLVSKAKTIAAFNQL 676
>SYGB_STRP3 (Q8K663) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 679 Score = 44.7 bits (104), Expect = 1e-04 Identities = 22/50 (44%), Positives = 31/50 (62%) Frame = -3 Query: 358 ESSLLLIQPLEDFFNNVFVMAEDEKIRNNRLALLQKVASLTKGIADLSVL 209 E +L + DFF+N VMAED+ ++NNRLA+L + S K IA + L Sbjct: 627 EQVFVLSPVINDFFDNTMVMAEDQALKNNRLAILSDLVSKAKTIAAFNQL 676
>SYGB_YERPE (Q8Z9W7) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 689 Score = 44.7 bits (104), Expect = 1e-04 Identities = 21/45 (46%), Positives = 32/45 (71%) Frame = -3 Query: 343 LIQPLEDFFNNVFVMAEDEKIRNNRLALLQKVASLTKGIADLSVL 209 L + +++FF +V VMAED+ +R NRL LL K+ L +AD+S+L Sbjct: 644 LRETVDEFFESVMVMAEDDAVRVNRLTLLSKLRELFLQVADISLL 688
>SYGB_PSEAE (Q9I7B8) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 684 Score = 44.3 bits (103), Expect = 1e-04 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 3/78 (3%) Frame = -3 Query: 433 EKALWSAYLEVANKIHP---GVDVKTFAESSLLLIQPLEDFFNNVFVMAEDEKIRNNRLA 263 EKAL SA +++ P D + L +P++ FF +V V +D +R NR A Sbjct: 606 EKALGSAVANAESEVAPLAAARDYRAALARLAALREPVDTFFADVMVNVDDAAVRANRYA 665 Query: 262 LLQKVASLTKGIADLSVL 209 LL K+ G+AD+S+L Sbjct: 666 LLAKLRGSFLGVADISLL 683
>SYGB_SALTY (Q8ZL96) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 688 Score = 44.3 bits (103), Expect = 1e-04 Identities = 21/42 (50%), Positives = 30/42 (71%) Frame = -3 Query: 334 PLEDFFNNVFVMAEDEKIRNNRLALLQKVASLTKGIADLSVL 209 P+++FF NV V AE++ IR NRL LL K+ L +AD+S+L Sbjct: 646 PVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQVADISLL 687
>SYGB_SALTI (Q8Z2B3) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 688 Score = 44.3 bits (103), Expect = 1e-04 Identities = 21/42 (50%), Positives = 30/42 (71%) Frame = -3 Query: 334 PLEDFFNNVFVMAEDEKIRNNRLALLQKVASLTKGIADLSVL 209 P+++FF NV V AE++ IR NRL LL K+ L +AD+S+L Sbjct: 646 PVDEFFENVMVNAEEKDIRINRLTLLSKLRELFLQVADISLL 687
>SYGB_STRP8 (Q8NZW7) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 679 Score = 43.9 bits (102), Expect = 2e-04 Identities = 22/50 (44%), Positives = 30/50 (60%) Frame = -3 Query: 358 ESSLLLIQPLEDFFNNVFVMAEDEKIRNNRLALLQKVASLTKGIADLSVL 209 E L + DFF+N VMAED+ ++NNRLA+L + S K IA + L Sbjct: 627 EQVFALSPVINDFFDNTMVMAEDQALKNNRLAILSDLVSKAKTIAAFNQL 676
>SYGB_PASMU (P57905) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 689 Score = 43.9 bits (102), Expect = 2e-04 Identities = 20/45 (44%), Positives = 33/45 (73%) Frame = -3 Query: 343 LIQPLEDFFNNVFVMAEDEKIRNNRLALLQKVASLTKGIADLSVL 209 L +P++ FF+NV V AE+ ++R NRLA+L + +L +AD+S+L Sbjct: 644 LREPVDTFFDNVMVNAENPQLRQNRLAILNNLRNLFLQVADISLL 688
>SYGB_RALSO (Q8Y213) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 697 Score = 43.9 bits (102), Expect = 2e-04 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%) Frame = -3 Query: 433 EKALWSAYLEVANKIHPGV---DVKTFAESSLLLIQPLEDFFNNVFVMAEDEKIRNNRLA 263 E+AL A +H D T ++ L + ++ FF+ V VMA+D +R+NRLA Sbjct: 618 ERALHQAVATSEPHVHDAFARGDFTTALKTLASLREAVDSFFDGVMVMADDTALRDNRLA 677 Query: 262 LLQKVASLTKGIADLSVL 209 LL ++ L +AD+S L Sbjct: 678 LLGELHGLMNRVADISKL 695
>SYGB_ECOLI (P00961) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 688 Score = 43.5 bits (101), Expect = 2e-04 Identities = 19/45 (42%), Positives = 33/45 (73%) Frame = -3 Query: 343 LIQPLEDFFNNVFVMAEDEKIRNNRLALLQKVASLTKGIADLSVL 209 L +P++ FF+ V VM +D+++R NRL +L+K+ L +AD+S+L Sbjct: 643 LREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADISLL 687
>SYGB_ECOL6 (P67030) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 688 Score = 43.5 bits (101), Expect = 2e-04 Identities = 19/45 (42%), Positives = 33/45 (73%) Frame = -3 Query: 343 LIQPLEDFFNNVFVMAEDEKIRNNRLALLQKVASLTKGIADLSVL 209 L +P++ FF+ V VM +D+++R NRL +L+K+ L +AD+S+L Sbjct: 643 LREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADISLL 687
>SYGB_ECO57 (P67031) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 688 Score = 43.5 bits (101), Expect = 2e-04 Identities = 19/45 (42%), Positives = 33/45 (73%) Frame = -3 Query: 343 LIQPLEDFFNNVFVMAEDEKIRNNRLALLQKVASLTKGIADLSVL 209 L +P++ FF+ V VM +D+++R NRL +L+K+ L +AD+S+L Sbjct: 643 LREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADISLL 687
>SYGB_THEMA (Q9WY60) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 672 Score = 43.1 bits (100), Expect = 3e-04 Identities = 23/78 (29%), Positives = 45/78 (57%), Gaps = 3/78 (3%) Frame = -3 Query: 433 EKALWSAYLEVANKIHPGVDVKTFAESSLLLIQP---LEDFFNNVFVMAEDEKIRNNRLA 263 EK L + + EV K+ ++ + E+ LI+ ++++F+NVFVM + + +R NRL+ Sbjct: 589 EKKLMNKFYEVKEKVLKALERLNYREALQYLIELKPYIDEYFDNVFVMVKRDDLRVNRLS 648 Query: 262 LLQKVASLTKGIADLSVL 209 L+ + L + D++ L Sbjct: 649 FLKNIDELFMMVGDMTYL 666
>SYGB_LACPL (Q88VS3) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 694 Score = 42.4 bits (98), Expect = 5e-04 Identities = 22/75 (29%), Positives = 41/75 (54%) Frame = -3 Query: 433 EKALWSAYLEVANKIHPGVDVKTFAESSLLLIQPLEDFFNNVFVMAEDEKIRNNRLALLQ 254 E+ L+ A LE+ + P + ++ ++ L + D+F VM++DEK+R+N L L Sbjct: 617 EQHLYDAVLELQKQFTPAMSMEDRFKALAALRPLIVDYFEQTMVMSKDEKVRDNHLKQLL 676 Query: 253 KVASLTKGIADLSVL 209 +A + + DL+ L Sbjct: 677 TIAQMINVMGDLNQL 691
>SYGB_FUSNN (Q8RH44) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 686 Score = 41.6 bits (96), Expect = 8e-04 Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 3/78 (3%) Frame = -3 Query: 433 EKALWSAYLEVANKIHPGVDVKTFA---ESSLLLIQPLEDFFNNVFVMAEDEKIRNNRLA 263 EK L++ +V +++ + K +A E L+ ++ +F V VM ED+ +R+NR+ Sbjct: 608 EKTLYAESKKVESEVEQAIKEKEYADYFEKLFTLVPTIDKYFETVIVMDEDKNVRDNRIG 667 Query: 262 LLQKVASLTKGIADLSVL 209 L + +L + IA L+ L Sbjct: 668 QLTYIMNLFEKIAYLNKL 685
>SYGB_RICCN (Q92G11) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 670 Score = 40.8 bits (94), Expect = 0.001 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%) Frame = -3 Query: 433 EKALWSAYLEVANKIHPGVDVKTFAESSLLL---IQPLEDFFNNVFVMAEDEKIRNNRLA 263 EK L+ +++ +I + K + ++ LL + P+ FF+NV V D KI NRL+ Sbjct: 593 EKELFEVIQKISPQIIDSIADKDYKKALNLLSSLLTPITSFFDNVLVNDSDPKIAQNRLS 652 Query: 262 LLQKVASLTKGIADLSVL 209 LLQ + L +A + L Sbjct: 653 LLQNICELFDKVAKFNRL 670
>SYGB_STRP1 (Q99YI4) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 679 Score = 39.7 bits (91), Expect = 0.003 Identities = 20/50 (40%), Positives = 28/50 (56%) Frame = -3 Query: 358 ESSLLLIQPLEDFFNNVFVMAEDEKIRNNRLALLQKVASLTKGIADLSVL 209 E L + DFF+N VMA D+ ++NNRLA+L + S K I + L Sbjct: 627 EQVFALSPVINDFFDNTMVMAGDQALKNNRLAILSDLVSKAKTIVAFNQL 676
>SYGB_BACHD (Q9KD48) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 693 Score = 38.5 bits (88), Expect = 0.007 Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 3/74 (4%) Frame = -3 Query: 433 EKALWSAYLEVANKIHPGV---DVKTFAESSLLLIQPLEDFFNNVFVMAEDEKIRNNRLA 263 E+ L+ AY++ + + + DV + I+P+ +F +V VM +++ I+ NRLA Sbjct: 613 ERVLYEAYVQTKDLVQGALASGDVSAAYAALEQTIEPIHQYFEHVMVMVDEQVIKENRLA 672 Query: 262 LLQKVASLTKGIAD 221 L+ A + A+ Sbjct: 673 LMHAFAGVIGSYAN 686
>SYGB_LISMO (Q8Y754) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 688 Score = 38.5 bits (88), Expect = 0.007 Identities = 19/52 (36%), Positives = 35/52 (67%) Frame = -3 Query: 373 VKTFAESSLLLIQPLEDFFNNVFVMAEDEKIRNNRLALLQKVASLTKGIADL 218 +K FA+ L ++ +F+N VM+++++++NNRLALL ++AS K A + Sbjct: 635 LKAFAD----LRTTIDAYFDNTLVMSDNDELKNNRLALLFELASFIKEFAQM 682
>SYGB_LISIN (Q92BQ2) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 688 Score = 38.5 bits (88), Expect = 0.007 Identities = 19/52 (36%), Positives = 34/52 (65%) Frame = -3 Query: 373 VKTFAESSLLLIQPLEDFFNNVFVMAEDEKIRNNRLALLQKVASLTKGIADL 218 +K FA+ L ++ +F+N VM ++++++NNRLALL ++AS K A + Sbjct: 635 LKAFAD----LRTTIDGYFDNTLVMTDNDELKNNRLALLFELASFIKEFAQM 682
>SYGB_LISMF (Q71ZL2) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 688 Score = 38.1 bits (87), Expect = 0.009 Identities = 19/52 (36%), Positives = 34/52 (65%) Frame = -3 Query: 373 VKTFAESSLLLIQPLEDFFNNVFVMAEDEKIRNNRLALLQKVASLTKGIADL 218 +K FA+ L ++ +F+N VM ++++++NNRLALL ++AS K A + Sbjct: 635 LKAFAD----LRTTIDAYFDNTLVMTDNDELKNNRLALLFELASFIKEFAQM 682
>SYGB_RICPR (Q9ZCB1) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 665 Score = 37.7 bits (86), Expect = 0.012 Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 3/73 (4%) Frame = -3 Query: 433 EKALWSAYLEVANKIHPGVDVKTFAESSLLL---IQPLEDFFNNVFVMAEDEKIRNNRLA 263 EK L+ +++ +I + K + ++ LL ++P+ FF+NV V D KI NRL+ Sbjct: 588 EKELFEVIQKISQQIIVIIANKDYQKALNLLSSLLKPITSFFDNVLVNDSDPKIAQNRLS 647 Query: 262 LLQKVASLTKGIA 224 LLQ + +A Sbjct: 648 LLQNTCEVFDKVA 660
>SYGB_STRR6 (Q8DP66) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 678 Score = 36.2 bits (82), Expect = 0.035 Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 1/35 (2%) Frame = -3 Query: 349 LLLIQPLED-FFNNVFVMAEDEKIRNNRLALLQKV 248 L + P+ D FF N VMAED+ +R NRLA+L ++ Sbjct: 628 LFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQL 662
>SYGB_STRPN (Q97PW6) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 678 Score = 36.2 bits (82), Expect = 0.035 Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 1/35 (2%) Frame = -3 Query: 349 LLLIQPLED-FFNNVFVMAEDEKIRNNRLALLQKV 248 L + P+ D FF N VMAED+ +R NRLA+L ++ Sbjct: 628 LFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQL 662
>SYGB_BUCAI (P57235) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 690 Score = 35.8 bits (81), Expect = 0.046 Identities = 19/42 (45%), Positives = 24/42 (57%) Frame = -3 Query: 334 PLEDFFNNVFVMAEDEKIRNNRLALLQKVASLTKGIADLSVL 209 P+ +FF V + D KIR NRL LL K+ + IAD S L Sbjct: 648 PIYNFFKKVKIYHSDSKIRLNRLLLLSKLKKIFFKIADFSYL 689
>SYGB_SYNY3 (Q55690) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 722 Score = 33.9 bits (76), Expect = 0.18 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 6/81 (7%) Frame = -3 Query: 433 EKALWSAYLEV---ANKIHPGVDVKTFAESSLLLIQPLEDFFN---NVFVMAEDEKIRNN 272 EKA++ A L + A ++ D +T + L + +FF+ +V VMAE++++R N Sbjct: 638 EKAVYQALLAIYPKAVEVQESRDYETLVNALHELAPTVAEFFDGPDSVLVMAENDELRQN 697 Query: 271 RLALLQKVASLTKGIADLSVL 209 RL LL + + + D + Sbjct: 698 RLNLLGLIRNYALILGDFGAI 718
>SYGB_XANCP (Q8P3I5) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 698 Score = 33.5 bits (75), Expect = 0.23 Identities = 23/74 (31%), Positives = 40/74 (54%) Frame = -3 Query: 430 KALWSAYLEVANKIHPGVDVKTFAESSLLLIQPLEDFFNNVFVMAEDEKIRNNRLALLQK 251 +A+ +A + + +H V A + L Q ++ FF+ V V A+D ++R NRLALL+K Sbjct: 624 EAVEAAIGDTGDALHRHDYVAVLARLARLRPQ-VDAFFDGVMVNADDPQLRANRLALLKK 682 Query: 250 VASLTKGIADLSVL 209 + +A + L Sbjct: 683 LGDRLGSVAAIEHL 696
>SYGB_XYLFT (Q87D45) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 722 Score = 32.7 bits (73), Expect = 0.39 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 3/65 (4%) Frame = -3 Query: 433 EKALWSAYLEVANKIHPGVDVKTFAESSLLLIQ---PLEDFFNNVFVMAEDEKIRNNRLA 263 E L A V +D K + L + P+++FF+ V V E+ +R NRLA Sbjct: 643 ESGLLVALEGVITDTRSALDCKNYVSVLTCLARLRPPIDEFFDKVMVNDENLMLRANRLA 702 Query: 262 LLQKV 248 LLQ++ Sbjct: 703 LLQRL 707
>SYGB_XYLFA (Q9PC26) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 722 Score = 32.7 bits (73), Expect = 0.39 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 3/65 (4%) Frame = -3 Query: 433 EKALWSAYLEVANKIHPGVDVKTFAESSLLLIQ---PLEDFFNNVFVMAEDEKIRNNRLA 263 E L A V +D K + L + P+++FF+ V V E+ +R NRLA Sbjct: 643 ESGLLVALEGVITDTRSALDCKNYVSVLTCLARLRPPIDEFFDKVMVNDENLMLRANRLA 702 Query: 262 LLQKV 248 LLQ++ Sbjct: 703 LLQRL 707
>SYGB_BUCBP (P59573) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 697 Score = 32.3 bits (72), Expect = 0.51 Identities = 16/41 (39%), Positives = 26/41 (63%) Frame = -3 Query: 337 QPLEDFFNNVFVMAEDEKIRNNRLALLQKVASLTKGIADLS 215 Q + +FFN V + + I+NNRLA+L K+ +L I++ S Sbjct: 649 QLIHEFFNKVMINHKIVSIKNNRLAILFKIQNLFFTISNFS 689
>SYGB_BUCAP (Q8KA07) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 691 Score = 32.0 bits (71), Expect = 0.67 Identities = 17/45 (37%), Positives = 27/45 (60%) Frame = -3 Query: 343 LIQPLEDFFNNVFVMAEDEKIRNNRLALLQKVASLTKGIADLSVL 209 L +P+++FF+ V + + +IR NRL LL K+ IA+ S L Sbjct: 646 LEKPIDNFFDKVQINHSNFEIRQNRLLLLIKIQKFFLKIANFSYL 690
>IRS2_MOUSE (P81122) Insulin receptor substrate 2 (IRS-2) (4PS)| Length = 1321 Score = 32.0 bits (71), Expect = 0.67 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Frame = +1 Query: 127 KEMAPTSKMGCTL-QLDRLLAPRLTKTL--VKPRGRLSPLSDSQPFVAAPGDCY 279 K P+++ G T+ +D LL+P + + PR SP S QP APGD Y Sbjct: 979 KSPKPSTRSGDTVGSMDGLLSPEASSPYPPLPPRPSTSPSSLQQPLPPAPGDLY 1032
>CN102_HUMAN (Q9H7Z3) Protein C14orf102| Length = 1164 Score = 30.4 bits (67), Expect = 1.9 Identities = 15/61 (24%), Positives = 31/61 (50%) Frame = -3 Query: 430 KALWSAYLEVANKIHPGVDVKTFAESSLLLIQPLEDFFNNVFVMAEDEKIRNNRLALLQK 251 + LW +Y+++ NK H + F ++ +PLE + + E EK+R + +Q+ Sbjct: 998 QVLWRSYVQIQNKSHSASKTRRFFDTITRSAKPLEPWLFAI----EAEKLRKRLVETVQR 1053 Query: 250 V 248 + Sbjct: 1054 L 1054
>SCC3_SCHPO (O13816) Cohesin subunit psc3 (SCC3 homolog)| Length = 962 Score = 30.4 bits (67), Expect = 1.9 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 5/52 (9%) Frame = -3 Query: 400 ANKIHP-----GVDVKTFAESSLLLIQPLEDFFNNVFVMAEDEKIRNNRLAL 260 + K HP GV+VK ++++ P E+ FNN+F D+K+ +A+ Sbjct: 52 SKKRHPRPNSKGVNVKRSRRNAIVEEDPQEEIFNNLFAFLLDQKVDTMDIAV 103
>ORC3_MOUSE (Q9JK30) Origin recognition complex subunit 3 (Origin recognition| complex subunit Latheo) Length = 715 Score = 29.6 bits (65), Expect = 3.3 Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 1/39 (2%) Frame = -3 Query: 334 PLEDFFNNVFVMAEDEKIRNNRLALL-QKVASLTKGIAD 221 P+ED+FNN + +ED K+R +LL Q++ S T+ + + Sbjct: 32 PIEDYFNNEELDSEDSKLRFETYSLLWQRMKSETEQLQE 70
>SYR_PORGI (Q7MXD5) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA| ligase) (ArgRS) Length = 597 Score = 29.6 bits (65), Expect = 3.3 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 2/71 (2%) Frame = -3 Query: 418 SAYLEVANKIHPGVDVKTFAESSLLLIQPLEDFFNNVFVMAE-DEKIRNNRLALLQKVA- 245 S Y EV ++ A L++ F+++ V+ E DE+IR RLAL + VA Sbjct: 521 SEYAEVVSEAGHSYSPALIANYIYDLVKEYNQFYHDFSVLKEEDERIRAFRLALSEVVAL 580 Query: 244 SLTKGIADLSV 212 ++ KG A L + Sbjct: 581 TMRKGFALLGI 591
>CN102_MOUSE (Q80XC6) Protein C14orf102 homolog| Length = 1172 Score = 28.5 bits (62), Expect = 7.4 Identities = 16/61 (26%), Positives = 30/61 (49%) Frame = -3 Query: 430 KALWSAYLEVANKIHPGVDVKTFAESSLLLIQPLEDFFNNVFVMAEDEKIRNNRLALLQK 251 + LW AY+++ NK H + F ++ + LE + + E EK+R + +Q+ Sbjct: 1006 QVLWRAYVQIQNKSHSANKTRRFFDTVTRSAKHLEPWLFAI----EAEKLRKKLVESVQR 1061 Query: 250 V 248 V Sbjct: 1062 V 1062
>MOAA_SYNPW (Q9EYN8) Molybdenum cofactor biosynthesis protein A| Length = 347 Score = 28.5 bits (62), Expect = 7.4 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = +2 Query: 278 TDLLIFRHDENVVEEILQGLYQEQR 352 TDL F H E +E +++GL+Q++R Sbjct: 299 TDLRPFLHSEETLEAVVRGLWQQRR 323
>CEMA_ARATH (P56783) Chloroplast envelope membrane protein| Length = 229 Score = 28.5 bits (62), Expect = 7.4 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%) Frame = -2 Query: 173 SSWSVHPI--FEVGAISFTFVTGHQFWGK 93 + +++H I F ISF ++G+ FWGK Sbjct: 100 NEYNIHTILHFSTNLISFVILSGYSFWGK 128
>SYG_CHLTR (Q46371) Glycyl-tRNA synthetase (EC 6.1.1.14) (GlyRS) [Includes:| Glycyl-tRNA synthetase alpha chain (Glycine--tRNA ligase alpha chain); Glycyl-tRNA synthetase beta chain (Glycine--tRNA ligase beta chain)] Length = 1003 Score = 28.5 bits (62), Expect = 7.4 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = -3 Query: 343 LIQPLEDFFNNVFVMAEDEKIRNNRLALL 257 L Q E F ++V V ++DE RN R+ALL Sbjct: 960 LAQSTELFLDSVRVASDDESTRNQRIALL 988
>CEAC_ECOLI (P00645) Cloacin (EC 3.1.-.-) (Ribonuclease)| Length = 561 Score = 28.5 bits (62), Expect = 7.4 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -2 Query: 263 AATKGCESDKGDSRPLGFT 207 A KG ++KGDSRP GFT Sbjct: 252 APPKGIVAEKGDSRPAGFT 270
>LIGE_PSEPA (P27457) Beta-etherase (Beta-aryl ether cleaving enzyme)| Length = 280 Score = 28.1 bits (61), Expect = 9.7 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 1/45 (2%) Frame = -2 Query: 416 RLLGGCQ*DPS-WRRRQNLCRVFFALDTAPGGFLQQRFRHGGR*E 285 +L GC P WR + L F +D PGGF R GGR E Sbjct: 12 QLESGCTISPYVWRTKYALKHKGFDIDIVPGGFTGILERTGGRSE 56 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,450,965 Number of Sequences: 219361 Number of extensions: 1101737 Number of successful extensions: 3045 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 2995 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3044 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
