ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl40h11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476283.1| Oryza sativa (japonica cultivar-group), predic... 109 8e-21
2dbj|AK072800.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 8e-21
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 80 7e-12
4dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic D... 80 7e-12
5dbj|AK066011.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 7e-12
6emb|CR381694.8| Zebrafish DNA sequence from clone CH211-55I2 in ... 46 0.095
7ref|XM_877857.1| PREDICTED: Bos taurus similar to Nonhistone chr... 44 0.37
8ref|XM_589617.2| PREDICTED: Bos taurus similar to Nonhistone chr... 44 0.37
9gb|AC129415.1| Homo sapiens 3 BAC RP11-382L10 (Roswell Park Canc... 42 1.5
10gb|AC087477.8| Homo sapiens chromosome 15, clone RP11-522B15, co... 42 1.5
11gb|AC114399.2| Homo sapiens chromosome 3 clone RP11-1019A2, comp... 42 1.5
12gb|AC099777.2| Homo sapiens chromosome 3 clone RP11-332H21, comp... 42 1.5
13gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 42 1.5
14dbj|AB073166.1| Arabidopsis thaliana DNA, chromosome 4 centromer... 42 1.5
15ref|NM_207713.1| Eremothecium gossypii AAL182Wp (AAL182W), mRNA 42 1.5
16emb|BX005366.18| Zebrafish DNA sequence from clone DKEY-222J15 i... 42 1.5
17ref|NM_185185.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.8
18gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.8
19emb|AJ248287.2|CNSPAX05 Pyrococcus abyssi complete genome; segme... 40 5.8
20ref|XM_759953.1| Theileria parva strain Muguga hypothetical prot... 40 5.8
21emb|AL445243.3| Human DNA sequence from clone RP11-538C21 on chr... 40 5.8
22emb|AL022401.2|HS93L7 Human DNA sequence from clone RP1-93L7 on ... 40 5.8
23emb|CR377214.13| Zebrafish DNA sequence from clone CH211-261F19 ... 40 5.8
24emb|AL645804.8| Zebrafish DNA sequence from clone BUSM1-25N23 Co... 40 5.8
25emb|BX323075.13| Zebrafish DNA sequence from clone CH211-230C4 i... 40 5.8
26emb|BX324125.5| Zebrafish DNA sequence from clone DKEY-185M11, c... 40 5.8
27gb|AC078817.18| Homo sapiens 12 BAC RP11-244J10 (Roswell Park Ca... 40 5.8
28dbj|AK057533.1| Homo sapiens cDNA FLJ32971 fis, clone TESTI2008847 40 5.8
29gb|AC087368.7| Homo sapiens chromosome 8, clone RP11-711G22, com... 40 5.8
30gb|AC102945.2| Homo sapiens chromosome 8, clone CTD-2373N4, comp... 40 5.8
31ref|XM_694931.1| PREDICTED: Danio rerio similar to Contactin 3 p... 40 5.8
32gb|AC011204.6| Homo sapiens, clone RP11-115P4, complete sequence 40 5.8
33dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
34gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genom... 40 5.8
35emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 5.8
36gb|AY530950.1| Zea mays putative zinc finger protein (Z438D03.1)... 40 5.8
37gb|L43967.2| Mycoplasma genitalium G37, complete genome 40 5.8
38emb|AL824714.17| Mouse DNA sequence from clone RP23-116G14 on ch... 40 5.8
39gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 5.8
40emb|AL831724.7| Mouse DNA sequence from clone RP23-405G17 on chr... 40 5.8 
>ref|XM_476283.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3063

 Score =  109 bits (55), Expect = 8e-21
 Identities = 184/227 (81%)
 Strand = Plus / Minus

                                                                        
Query: 197  ctaaaaccctggtaaaaccgagaggtcggctatcccctttgtcagactcgcaaccttttg 256
            |||||||||||||||||| || |||||||| || ||||||| |||||||||||||||   
Sbjct: 3063 ctaaaaccctggtaaaactgacaggtcggcaattccctttggcagactcgcaaccttcgt 3004

                                                                        
Query: 257  tagcagcgccaggcgattgttacggatcttctcatcttccgccatgacgaaaacgttgtt 316
            |||||| || || ||||||||||| |   |||| |||||||||||||| ||||| ||  |
Sbjct: 3003 tagcagtgcaagccgattgttacgaactctctcgtcttccgccatgacaaaaacatttgt 2944

                                                                        
Query: 317  gaagaaatcctccaggggctgtatcaagagcaaagaagactcggcaaaggttttgacgtc 376
             |||||||| || ||||| || | ||    || |||||  || ||||||| ||| | |||
Sbjct: 2943 aaagaaatcttctaggggttgcagcagttccagagaagcgtccgcaaaggcttttatgtc 2884

                                                           
Query: 377  gacgccaggatggatcttattggcaacctccaagtaggcgctccaca 423
             || |||||||| |||||||  ||||||||||||||||| |||||||
Sbjct: 2883 aacaccaggatgaatcttatccgcaacctccaagtaggcactccaca 2837
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>dbj|AK072800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135F01, full
            insert sequence
          Length = 3507

 Score =  109 bits (55), Expect = 8e-21
 Identities = 184/227 (81%)
 Strand = Plus / Minus

                                                                        
Query: 197  ctaaaaccctggtaaaaccgagaggtcggctatcccctttgtcagactcgcaaccttttg 256
            |||||||||||||||||| || |||||||| || ||||||| |||||||||||||||   
Sbjct: 3245 ctaaaaccctggtaaaactgacaggtcggcaattccctttggcagactcgcaaccttcgt 3186

                                                                        
Query: 257  tagcagcgccaggcgattgttacggatcttctcatcttccgccatgacgaaaacgttgtt 316
            |||||| || || ||||||||||| |   |||| |||||||||||||| ||||| ||  |
Sbjct: 3185 tagcagtgcaagccgattgttacgaactctctcgtcttccgccatgacaaaaacatttgt 3126

                                                                        
Query: 317  gaagaaatcctccaggggctgtatcaagagcaaagaagactcggcaaaggttttgacgtc 376
             |||||||| || ||||| || | ||    || |||||  || ||||||| ||| | |||
Sbjct: 3125 aaagaaatcttctaggggttgcagcagttccagagaagcgtccgcaaaggcttttatgtc 3066

                                                           
Query: 377  gacgccaggatggatcttattggcaacctccaagtaggcgctccaca 423
             || |||||||| |||||||  ||||||||||||||||| |||||||
Sbjct: 3065 aacaccaggatgaatcttatccgcaacctccaagtaggcactccaca 3019
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                          
Query: 197    ctaaaaccctggtaaaaccgagaggtcggctatcccctttgtcagactcgcaaccttttg 256
              |||||||||||||||||| || |||||||| || ||||||| |||||||||||||||   
Sbjct: 243362 ctaaaaccctggtaaaactgacaggtcggcaattccctttggcagactcgcaaccttcgt 243303

                                      
Query: 257    tagcagcgccaggcgattgttacg 280
              |||||| || || |||||||||||
Sbjct: 243302 tagcagtgcaagccgattgttacg 243279



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                         
Query: 381    ccaggatggatcttattggcaacctccaagtaggcgctccaca 423
              |||||||| |||||||  ||||||||||||||||| |||||||
Sbjct: 242919 ccaggatgaatcttatccgcaacctccaagtaggcactccaca 242877
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>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0075G19
          Length = 163558

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                          
Query: 197    ctaaaaccctggtaaaaccgagaggtcggctatcccctttgtcagactcgcaaccttttg 256
              |||||||||||||||||| || |||||||| || ||||||| |||||||||||||||   
Sbjct: 108258 ctaaaaccctggtaaaactgacaggtcggcaattccctttggcagactcgcaaccttcgt 108199

                                      
Query: 257    tagcagcgccaggcgattgttacg 280
              |||||| || || |||||||||||
Sbjct: 108198 tagcagtgcaagccgattgttacg 108175



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                         
Query: 381    ccaggatggatcttattggcaacctccaagtaggcgctccaca 423
              |||||||| |||||||  ||||||||||||||||| |||||||
Sbjct: 107815 ccaggatgaatcttatccgcaacctccaagtaggcactccaca 107773
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>dbj|AK066011.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013048K11, full
            insert sequence
          Length = 2309

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                        
Query: 197  ctaaaaccctggtaaaaccgagaggtcggctatcccctttgtcagactcgcaaccttttg 256
            |||||||||||||||||| || |||||||| || ||||||| |||||||||||||||   
Sbjct: 2098 ctaaaaccctggtaaaactgacaggtcggcaattccctttggcagactcgcaaccttcgt 2039

                                    
Query: 257  tagcagcgccaggcgattgttacg 280
            |||||| || || |||||||||||
Sbjct: 2038 tagcagtgcaagccgattgttacg 2015



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                       
Query: 381  ccaggatggatcttattggcaacctccaagtaggcgctccaca 423
            |||||||| |||||||  ||||||||||||||||| |||||||
Sbjct: 1655 ccaggatgaatcttatccgcaacctccaagtaggcactccaca 1613
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>emb|CR381694.8| Zebrafish DNA sequence from clone CH211-55I2 in linkage group 10,
             complete sequence
          Length = 178736

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 31    taaacaacatactaattaataca 53
             |||||||||||||||||||||||
Sbjct: 17378 taaacaacatactaattaataca 17356
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>ref|XM_877857.1| PREDICTED: Bos taurus similar to Nonhistone chromosomal protein
           HMG-17 (High-mobility group nucleosome binding domain
           2), transcript variant 2 (LOC512161), mRNA
          Length = 1184

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 96  cccccaaaattgatgaccagta 117
           ||||||||||||||||||||||
Sbjct: 782 cccccaaaattgatgaccagta 803
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>ref|XM_589617.2| PREDICTED: Bos taurus similar to Nonhistone chromosomal protein
           HMG-17 (High-mobility group nucleosome binding domain
           2), transcript variant 1 (LOC512161), mRNA
          Length = 1126

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 96  cccccaaaattgatgaccagta 117
           ||||||||||||||||||||||
Sbjct: 724 cccccaaaattgatgaccagta 745
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>gb|AC129415.1| Homo sapiens 3 BAC RP11-382L10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 110116

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 3     agaagaaaatggatttaatca 23
             |||||||||||||||||||||
Sbjct: 57568 agaagaaaatggatttaatca 57588
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>gb|AC087477.8| Homo sapiens chromosome 15, clone RP11-522B15, complete sequence
          Length = 191434

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 65     aattacattctcattcttctc 85
              |||||||||||||||||||||
Sbjct: 175765 aattacattctcattcttctc 175785
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>gb|AC114399.2| Homo sapiens chromosome 3 clone RP11-1019A2, complete sequence
          Length = 180948

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 317   gaagaaatcctccaggggctg 337
             |||||||||||||||||||||
Sbjct: 27820 gaagaaatcctccaggggctg 27800
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>gb|AC099777.2| Homo sapiens chromosome 3 clone RP11-332H21, complete sequence
          Length = 206537

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 317   gaagaaatcctccaggggctg 337
             |||||||||||||||||||||
Sbjct: 21126 gaagaaatcctccaggggctg 21146
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>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I,
             complete sequence
          Length = 691920

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 65    aattacattctcattcttctc 85
             |||||||||||||||||||||
Sbjct: 19847 aattacattctcattcttctc 19827
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>dbj|AB073166.1| Arabidopsis thaliana DNA, chromosome 4 centromere region, BAC
             clone:F15N16
          Length = 123460

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 168   actcgaccgcctgctcgctccaagg 192
             |||||||||||||||| ||||||||
Sbjct: 49944 actcgaccgcctgctctctccaagg 49968
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>ref|NM_207713.1| Eremothecium gossypii AAL182Wp (AAL182W), mRNA
          Length = 3696

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 65   aattacattctcattcttctc 85
            |||||||||||||||||||||
Sbjct: 3693 aattacattctcattcttctc 3673
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>emb|BX005366.18| Zebrafish DNA sequence from clone DKEY-222J15 in linkage group 1,
             complete sequence
          Length = 162076

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 33    aacaacatactaattaataca 53
             |||||||||||||||||||||
Sbjct: 14275 aacaacatactaattaataca 14295
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>ref|NM_185185.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3939

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 66  attacattctcattcttctc 85
           ||||||||||||||||||||
Sbjct: 770 attacattctcattcttctc 751
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 66       attacattctcattcttctc 85
                ||||||||||||||||||||
Sbjct: 35411120 attacattctcattcttctc 35411139
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>emb|AJ248287.2|CNSPAX05 Pyrococcus abyssi complete genome; segment 5/6
          Length = 305600

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    gtaaaagaaatggctccaac 143
              ||||||||||||||||||||
Sbjct: 151235 gtaaaagaaatggctccaac 151216
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>ref|XM_759953.1| Theileria parva strain Muguga hypothetical protein (TP02_0480)
           partial mRNA
          Length = 285

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 111 accagtaacaaatgtaaaag 130
           ||||||||||||||||||||
Sbjct: 228 accagtaacaaatgtaaaag 247
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>emb|AL445243.3| Human DNA sequence from clone RP11-538C21 on chromosome 13 Contains a
             novel gene, complete sequence
          Length = 150937

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    cccagtaatttcccccaaaa 104
             ||||||||||||||||||||
Sbjct: 10211 cccagtaatttcccccaaaa 10192
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>emb|AL022401.2|HS93L7 Human DNA sequence from clone RP1-93L7 on chromosome Xq21 Contains a
              novel pseudogene similar to RIKEN cDNA 6330577E15Rik, a
              pseudogene similar to ring finger protein 34 (RNF34) and
              the 3' end of the CHM gene for choroideremia (Rab escort
              protein 1), complete sequence
          Length = 206784

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 92     atttcccccaaaattgatga 111
              ||||||||||||||||||||
Sbjct: 164617 atttcccccaaaattgatga 164636
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>emb|CR377214.13| Zebrafish DNA sequence from clone CH211-261F19 in linkage group 6,
              complete sequence
          Length = 181635

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 72     ttctcattcttctcccagta 91
              ||||||||||||||||||||
Sbjct: 153315 ttctcattcttctcccagta 153296
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>emb|AL645804.8| Zebrafish DNA sequence from clone BUSM1-25N23 Contains the 3' part
           of a novel gene similar to CBL (Cas-Br-M (murine)
           ecotropic retroviral transforming sequence), the 3' part
           of the alcam gene for activated leukocyte cell adhesion
           molecule and a putative novel gene, complete sequence
          Length = 119087

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 31  taaacaacatactaattaat 50
           ||||||||||||||||||||
Sbjct: 460 taaacaacatactaattaat 479
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>emb|BX323075.13| Zebrafish DNA sequence from clone CH211-230C4 in linkage group 6,
              complete sequence
          Length = 154270

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 72     ttctcattcttctcccagta 91
              ||||||||||||||||||||
Sbjct: 140979 ttctcattcttctcccagta 140960
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>emb|BX324125.5| Zebrafish DNA sequence from clone DKEY-185M11, complete sequence
          Length = 196525

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     ataattacattctcattctt 82
              ||||||||||||||||||||
Sbjct: 145027 ataattacattctcattctt 145046
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>gb|AC078817.18| Homo sapiens 12 BAC RP11-244J10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 172802

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 90     taatttcccccaaaattgat 109
              ||||||||||||||||||||
Sbjct: 127847 taatttcccccaaaattgat 127828
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>dbj|AK057533.1| Homo sapiens cDNA FLJ32971 fis, clone TESTI2008847
          Length = 1995

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  attgatgaccagtaacaaat 123
            ||||||||||||||||||||
Sbjct: 1808 attgatgaccagtaacaaat 1827
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>gb|AC087368.7| Homo sapiens chromosome 8, clone RP11-711G22, complete sequence
          Length = 185315

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 92     atttcccccaaaattgatga 111
              ||||||||||||||||||||
Sbjct: 115701 atttcccccaaaattgatga 115720
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>gb|AC102945.2| Homo sapiens chromosome 8, clone CTD-2373N4, complete sequence
          Length = 127677

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   attgatgaccagtaacaaat 123
             ||||||||||||||||||||
Sbjct: 28511 attgatgaccagtaacaaat 28530
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>ref|XM_694931.1| PREDICTED: Danio rerio similar to Contactin 3 precursor
            (Brain-derived immunoglobulin superfamily protein 1)
            (BIG-1) (Plasmacytoma-associated neuronal glycoprotein)
            (LOC571349), mRNA
          Length = 1906

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 72   ttctcattcttctcccagta 91
            ||||||||||||||||||||
Sbjct: 1265 ttctcattcttctcccagta 1246
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>gb|AC011204.6| Homo sapiens, clone RP11-115P4, complete sequence
          Length = 155926

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    attgatgaccagtaacaaat 123
              ||||||||||||||||||||
Sbjct: 154186 attgatgaccagtaacaaat 154205
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 66       attacattctcattcttctc 85
                ||||||||||||||||||||
Sbjct: 35501192 attacattctcattcttctc 35501211
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>gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genomic sequence, complete
             sequence
          Length = 133846

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    attacattctcattcttctc 85
             ||||||||||||||||||||
Sbjct: 76506 attacattctcattcttctc 76487
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 165     ccaactcgaccgcctgctcg 184
               ||||||||||||||||||||
Sbjct: 2903609 ccaactcgaccgcctgctcg 2903628
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>gb|AY530950.1| Zea mays putative zinc finger protein (Z438D03.1), unknown (Z438D03.5),
             epsilon-COP (Z438D03.6), putative kinase (Z438D03.7),
             unknown (Z438D03.25), and C1-B73 (Z438D03.27) genes,
             complete cds
          Length = 185988

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 355   actcggcaaaggttttgacg 374
             ||||||||||||||||||||
Sbjct: 13388 actcggcaaaggttttgacg 13407
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>gb|L43967.2| Mycoplasma genitalium G37, complete genome
          Length = 580076

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 275    gttacggatcttctcatctt 294
              ||||||||||||||||||||
Sbjct: 193787 gttacggatcttctcatctt 193768
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>emb|AL824714.17| Mouse DNA sequence from clone RP23-116G14 on chromosome X, complete
             sequence
          Length = 156175

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     gaagaagaaaatggatttaatcaa 24
             |||||||||||| |||||||||||
Sbjct: 17848 gaagaagaaaattgatttaatcaa 17825
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 297     gccatgacgaaaacgttgtt 316
               ||||||||||||||||||||
Sbjct: 5097335 gccatgacgaaaacgttgtt 5097316
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>emb|AL831724.7| Mouse DNA sequence from clone RP23-405G17 on chromosome X, complete
             sequence
          Length = 100597

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     gaagaagaaaatggatttaatcaa 24
             |||||||||||| |||||||||||
Sbjct: 84538 gaagaagaaaattgatttaatcaa 84515


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,362,314
Number of Sequences: 3902068
Number of extensions: 4362314
Number of successful extensions: 100267
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100120
Number of HSP's gapped (non-prelim): 147
length of query: 435
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 413
effective length of database: 17,147,199,772
effective search space: 7081793505836
effective search space used: 7081793505836
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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