ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl40h10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC121914.3| Mus musculus BAC clone RP24-186A10 from chromosom... 46 0.055
2dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.055
3dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.055
4dbj|AP006157.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.055
5emb|CR318599.18| Zebrafish DNA sequence from clone DKEY-28D5 in ... 44 0.22
6ref|NM_001016168.2| Xenopus tropicalis hypothetical protein LOC5... 42 0.85
7gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate h... 42 0.85
8gb|AC163029.5| Mus musculus chromosome 1, clone RP23-267I23, com... 42 0.85
9gb|AC105151.8| Mus musculus chromosome 1, clone RP23-28N2, compl... 42 0.85
10gb|AF332862.1|AF332859S2 Mus musculus diadenosine triphosphate h... 42 0.85
11dbj|BS000060.1| Pan troglodytes chromosome 22 clone:RP43-086L15,... 42 0.85
12dbj|BS000059.1| Pan troglodytes chromosome 22 clone:RP43-022N17,... 42 0.85
13gb|AC154522.3| Mus musculus BAC clone RP23-480O9 from 13, comple... 42 0.85
14emb|CR761898.2| Xenopus tropicalis finished cDNA, clone TNeu073d04 42 0.85
15dbj|AP001678.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 0.85
16emb|AL589696.10| Mouse DNA sequence from clone RP23-454M13 on ch... 42 0.85
17dbj|AP001254.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 42 0.85
18gb|AC163623.5| Mus musculus BAC clone RP23-123D6 from chromosome... 40 3.4
19gb|AC123846.5| Mus musculus BAC clone RP23-435B22 from chromosom... 40 3.4
20gb|AC121820.2| Mus musculus BAC clone RP23-460N4 from 6, complet... 40 3.4
21emb|AL031731.44|HS330O12 Human DNA sequence from clone RP3-330O1... 40 3.4
22emb|AL031347.1|HS596H12 Human DNA sequence from clone RP4-596H12... 40 3.4
23emb|BX640477.6| Zebrafish DNA sequence from clone DKEY-43N16 in ... 40 3.4
24gb|AC023192.8| Homo sapiens chromosome 18, clone RP11-562H1, com... 40 3.4
25gb|AC091198.6| Homo sapiens chromosome 18, clone RP11-258B16, co... 40 3.4
26emb|BX322798.6| Zebrafish DNA sequence from clone CH211-231F6 in... 40 3.4
27dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.4
28emb|BX322785.6| Zebrafish DNA sequence from clone DKEYP-78B1 in ... 40 3.4
29dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge... 40 3.4
30gb|AC096664.1| Homo sapiens BAC clone RP11-240J3 from 2, complet... 40 3.4
31dbj|AP002540.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.4
32dbj|AP002522.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.4
33emb|AL928537.12| Mouse DNA sequence from clone RP23-236E7 on chr... 40 3.4
34emb|AL935148.22| Zebrafish DNA sequence from clone CH211-196G2 i... 40 3.4
35gb|AF160811.1|AF160811 Bacillus stearothermophilus L-arabinose t... 40 3.4
36emb|AL121768.4|CNS01DSB Human chromosome 14 DNA sequence BAC R-9... 40 3.4
37emb|AL954147.12| Zebrafish DNA sequence from clone CH211-117H23 ... 40 3.4
38gb|U37071.1|MMU37071 Mus musculus smooth muscle cell calponin ge... 40 3.4
39gb|U38929.1|MMCALP01 Mus musculus calponin-h1 gene, 5' flanking ... 40 3.4
40emb|BX548043.5| Zebrafish DNA sequence from clone DKEY-81J8 in l... 40 3.4
41gb|L49022.1|MUSH1CA Mus musculus h1-calponin alpha and beta gene... 40 3.4
42emb|AL672122.9| Mouse DNA sequence from clone RP23-435H13 on chr... 40 3.4 
>gb|AC121914.3| Mus musculus BAC clone RP24-186A10 from chromosome 3, complete sequence
          Length = 172937

 Score = 46.1 bits (23), Expect = 0.055
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 58    gaaaacacaaaagaaataaagct 80
             |||||||||||||||||||||||
Sbjct: 91228 gaaaacacaaaagaaataaagct 91250
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 46.1 bits (23), Expect = 0.055
 Identities = 87/105 (82%), Gaps = 5/105 (4%)
 Strand = Plus / Minus

                                                                           
Query: 118     tattacacccaagtacaaacagtacagacatgtc-ctcgtagcaccaaaatttactactt 176
               ||||||||| |||||||| |||||  |||||||  |||| ||||||||||||   |||||
Sbjct: 4514568 tattacaccgaagtacaa-cagtagtgacatgtttctcgaagcaccaaaatt---tactt 4514513

                                                            
Query: 177     tacatgtaaagcagcggaaagaatgaaaatccccctagctcactt 221
               |||| ||||||  |||||||||| |  |||||| | |||||||||
Sbjct: 4514512 tacaggtaaagaggcggaaagaacggcaatcccaccagctcactt 4514468
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>dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0638A12
          Length = 140731

 Score = 46.1 bits (23), Expect = 0.055
 Identities = 87/105 (82%), Gaps = 5/105 (4%)
 Strand = Plus / Minus

                                                                         
Query: 118   tattacacccaagtacaaacagtacagacatgtc-ctcgtagcaccaaaatttactactt 176
             ||||||||| |||||||| |||||  |||||||  |||| ||||||||||||   |||||
Sbjct: 57942 tattacaccgaagtacaa-cagtagtgacatgtttctcgaagcaccaaaatt---tactt 57887

                                                          
Query: 177   tacatgtaaagcagcggaaagaatgaaaatccccctagctcactt 221
             |||| ||||||  |||||||||| |  |||||| | |||||||||
Sbjct: 57886 tacaggtaaagaggcggaaagaacggcaatcccaccagctcactt 57842
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>dbj|AP006157.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1077E10
          Length = 100821

 Score = 46.1 bits (23), Expect = 0.055
 Identities = 87/105 (82%), Gaps = 5/105 (4%)
 Strand = Plus / Minus

                                                                         
Query: 118   tattacacccaagtacaaacagtacagacatgtc-ctcgtagcaccaaaatttactactt 176
             ||||||||| |||||||| |||||  |||||||  |||| ||||||||||||   |||||
Sbjct: 87056 tattacaccgaagtacaa-cagtagtgacatgtttctcgaagcaccaaaatt---tactt 87001

                                                          
Query: 177   tacatgtaaagcagcggaaagaatgaaaatccccctagctcactt 221
             |||| ||||||  |||||||||| |  |||||| | |||||||||
Sbjct: 87000 tacaggtaaagaggcggaaagaacggcaatcccaccagctcactt 86956
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>emb|CR318599.18| Zebrafish DNA sequence from clone DKEY-28D5 in linkage group 22, complete
              sequence
          Length = 222575

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 52     atatcagaaaacacaaaagaaataaa 77
              |||||||||||||||||||| |||||
Sbjct: 159088 atatcagaaaacacaaaagagataaa 159113
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>ref|NM_001016168.2| Xenopus tropicalis hypothetical protein LOC548922 (LOC548922), mRNA
          Length = 855

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 57  agaaaacacaaaagaaataaa 77
           |||||||||||||||||||||
Sbjct: 589 agaaaacacaaaagaaataaa 609
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>gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exons 6
             through 10 and partial cds
          Length = 688489

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 68    aagaaataaagctttgctgca 88
             |||||||||||||||||||||
Sbjct: 16697 aagaaataaagctttgctgca 16717



 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 68   aagaaataaagctttgctgca 88
            |||||||||||||||||||||
Sbjct: 9949 aagaaataaagctttgctgca 9969
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>gb|AC163029.5| Mus musculus chromosome 1, clone RP23-267I23, complete sequence
          Length = 181761

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 68     aagaaataaagctttgctgca 88
              |||||||||||||||||||||
Sbjct: 100678 aagaaataaagctttgctgca 100698
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>gb|AC105151.8| Mus musculus chromosome 1, clone RP23-28N2, complete sequence
          Length = 270578

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 68    aagaaataaagctttgctgca 88
             |||||||||||||||||||||
Sbjct: 37258 aagaaataaagctttgctgca 37238
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>gb|AF332862.1|AF332859S2 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, intron 5,
              partial sequence
          Length = 166617

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 68     aagaaataaagctttgctgca 88
              |||||||||||||||||||||
Sbjct: 137160 aagaaataaagctttgctgca 137180



 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 68     aagaaataaagctttgctgca 88
              |||||||||||||||||||||
Sbjct: 130413 aagaaataaagctttgctgca 130433
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>dbj|BS000060.1| Pan troglodytes chromosome 22 clone:RP43-086L15, map 22, complete
             sequences
          Length = 159919

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 54    atcagaaaacacaaaagaaataaag 78
             ||||||||||| |||||||||||||
Sbjct: 63848 atcagaaaacagaaaagaaataaag 63872
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>dbj|BS000059.1| Pan troglodytes chromosome 22 clone:RP43-022N17, map 22, complete
              sequences
          Length = 127718

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 54     atcagaaaacacaaaagaaataaag 78
              ||||||||||| |||||||||||||
Sbjct: 123277 atcagaaaacagaaaagaaataaag 123301
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>gb|AC154522.3| Mus musculus BAC clone RP23-480O9 from 13, complete sequence
          Length = 176876

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 68     aagaaataaagctttgctgca 88
              |||||||||||||||||||||
Sbjct: 130366 aagaaataaagctttgctgca 130346



 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 68     aagaaataaagctttgctgca 88
              |||||||||||||||||||||
Sbjct: 123636 aagaaataaagctttgctgca 123616
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>emb|CR761898.2| Xenopus tropicalis finished cDNA, clone TNeu073d04
          Length = 855

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 57  agaaaacacaaaagaaataaa 77
           |||||||||||||||||||||
Sbjct: 589 agaaaacacaaaagaaataaa 609
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>dbj|AP001678.1| Homo sapiens genomic DNA, chromosome 21q, section 22/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 54     atcagaaaacacaaaagaaataaag 78
              ||||||||||| |||||||||||||
Sbjct: 183746 atcagaaaacagaaaagaaataaag 183770
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>emb|AL589696.10| Mouse DNA sequence from clone RP23-454M13 on chromosome 15, complete
              sequence
          Length = 207431

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 68     aagaaataaagctttgctgca 88
              |||||||||||||||||||||
Sbjct: 150697 aagaaataaagctttgctgca 150677



 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 68     aagaaataaagctttgctgca 88
              |||||||||||||||||||||
Sbjct: 143953 aagaaataaagctttgctgca 143933
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>dbj|AP001254.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B66B12,
            LL56-APP region, complete sequence
          Length = 173915

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 54   atcagaaaacacaaaagaaataaag 78
            ||||||||||| |||||||||||||
Sbjct: 6339 atcagaaaacagaaaagaaataaag 6363
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>gb|AC163623.5| Mus musculus BAC clone RP23-123D6 from chromosome 9, complete sequence
          Length = 193784

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 67     aaagaaataaagctttgctg 86
              ||||||||||||||||||||
Sbjct: 164861 aaagaaataaagctttgctg 164880
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>gb|AC123846.5| Mus musculus BAC clone RP23-435B22 from chromosome 2, complete sequence
          Length = 221128

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    cagaaaacacaaaagaaata 75
             ||||||||||||||||||||
Sbjct: 89653 cagaaaacacaaaagaaata 89672
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>gb|AC121820.2| Mus musculus BAC clone RP23-460N4 from 6, complete sequence
          Length = 178653

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    atatcagaaaacacaaaaga 71
             ||||||||||||||||||||
Sbjct: 33593 atatcagaaaacacaaaaga 33574
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>emb|AL031731.44|HS330O12 Human DNA sequence from clone RP3-330O12 on chromosome 1p36.11-36.23
             Contains the FBXO2 gene for F-box only protein 2, the gene
             for F-box protein FBX30, the FBXO6 gene for F-box only
             protein 6, the MAD2L2 gene for MAD2 mitotic arrest
             deficient-like 2 (yeast), the 5' end of a novel gene and
             three CpG islands, complete sequence
          Length = 90136

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 59    aaaacacaaaagaaataaagcttt 82
             |||| |||||||||||||||||||
Sbjct: 85290 aaaatacaaaagaaataaagcttt 85313
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>emb|AL031347.1|HS596H12 Human DNA sequence from clone RP4-596H12 on chromosome 6p22.2-22.3,
              complete sequence
          Length = 175555

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 167    tttactactttacatgtaaa 186
              ||||||||||||||||||||
Sbjct: 155473 tttactactttacatgtaaa 155454
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>emb|BX640477.6| Zebrafish DNA sequence from clone DKEY-43N16 in linkage group 10,
              complete sequence
          Length = 258048

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 112    tgttcatattacacccaagt 131
              ||||||||||||||||||||
Sbjct: 100439 tgttcatattacacccaagt 100458
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>gb|AC023192.8| Homo sapiens chromosome 18, clone RP11-562H1, complete sequence
          Length = 167944

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     cacaaaagaaataaagcttt 82
              ||||||||||||||||||||
Sbjct: 112383 cacaaaagaaataaagcttt 112402
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>gb|AC091198.6| Homo sapiens chromosome 18, clone RP11-258B16, complete sequence
          Length = 173237

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     cacaaaagaaataaagcttt 82
              ||||||||||||||||||||
Sbjct: 123431 cacaaaagaaataaagcttt 123412
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>emb|BX322798.6| Zebrafish DNA sequence from clone CH211-231F6 in linkage group 24,
             complete sequence
          Length = 109868

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 167   tttactactttacatgtaaa 186
             ||||||||||||||||||||
Sbjct: 24224 tttactactttacatgtaaa 24205
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 52      atatcagaaaacacaaaaga 71
               ||||||||||||||||||||
Sbjct: 2697228 atatcagaaaacacaaaaga 2697209
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>emb|BX322785.6| Zebrafish DNA sequence from clone DKEYP-78B1 in linkage group 24,
            complete sequence
          Length = 176602

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 167  tttactactttacatgtaaa 186
            ||||||||||||||||||||
Sbjct: 7518 tttactactttacatgtaaa 7537
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>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 185     aagcagcggaaagaatgaaa 204
               ||||||||||||||||||||
Sbjct: 1945949 aagcagcggaaagaatgaaa 1945968
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>gb|AC096664.1| Homo sapiens BAC clone RP11-240J3 from 2, complete sequence
          Length = 83996

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    ttcgggattggtttatacta 110
             ||||||||||||||||||||
Sbjct: 68649 ttcgggattggtttatacta 68630
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>dbj|AP002540.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0434B04
          Length = 167029

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     atatcagaaaacacaaaaga 71
              ||||||||||||||||||||
Sbjct: 147003 atatcagaaaacacaaaaga 146984
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>dbj|AP002522.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0009G03
          Length = 163526

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 52   atatcagaaaacacaaaaga 71
            ||||||||||||||||||||
Sbjct: 2905 atatcagaaaacacaaaaga 2886
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>emb|AL928537.12| Mouse DNA sequence from clone RP23-236E7 on chromosome 2, complete
              sequence
          Length = 190808

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     cagaaaacacaaaagaaata 75
              ||||||||||||||||||||
Sbjct: 146365 cagaaaacacaaaagaaata 146384
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>emb|AL935148.22| Zebrafish DNA sequence from clone CH211-196G2 in linkage group 8,
            complete sequence
          Length = 195396

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 56   cagaaaacacaaaagaaataaagc 79
            |||||||||||||||||| |||||
Sbjct: 3484 cagaaaacacaaaagaaaaaaagc 3507
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>gb|AF160811.1|AF160811 Bacillus stearothermophilus L-arabinose transport, ATP binding
            protein (araG), L-arabinose membrane permease (araH),
            AraR (araR), L-ribulose 5-phosphate 4-epimerase (araD),
            L-ribulokinase (araB), L-arabinose isomerase (araA), and
            IS5377 transposase genes, complete cds
          Length = 10671

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 185  aagcagcggaaagaatgaaa 204
            ||||||||||||||||||||
Sbjct: 3074 aagcagcggaaagaatgaaa 3055
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>emb|AL121768.4|CNS01DSB Human chromosome 14 DNA sequence BAC R-976B16 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 213239

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     atcagaaaacacaaaagaaa 73
              ||||||||||||||||||||
Sbjct: 118614 atcagaaaacacaaaagaaa 118633
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>emb|AL954147.12| Zebrafish DNA sequence from clone CH211-117H23 in linkage group 24,
             complete sequence
          Length = 188067

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   tttactactttacatgtaaa 186
             ||||||||||||||||||||
Sbjct: 81749 tttactactttacatgtaaa 81768
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>gb|U37071.1|MMU37071 Mus musculus smooth muscle cell calponin gene, 5' flanking region
          Length = 3001

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 67   aaagaaataaagctttgctg 86
            ||||||||||||||||||||
Sbjct: 2443 aaagaaataaagctttgctg 2462
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>gb|U38929.1|MMCALP01 Mus musculus calponin-h1 gene, 5' flanking sequence
          Length = 1216

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 67  aaagaaataaagctttgctg 86
           ||||||||||||||||||||
Sbjct: 681 aaagaaataaagctttgctg 700
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>emb|BX548043.5| Zebrafish DNA sequence from clone DKEY-81J8 in linkage group 10,
             complete sequence
          Length = 156034

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   tgttcatattacacccaagt 131
             ||||||||||||||||||||
Sbjct: 31550 tgttcatattacacccaagt 31531
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>gb|L49022.1|MUSH1CA Mus musculus h1-calponin alpha and beta genes, complete cds
          Length = 10373

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 67  aaagaaataaagctttgctg 86
           ||||||||||||||||||||
Sbjct: 171 aaagaaataaagctttgctg 190
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>emb|AL672122.9| Mouse DNA sequence from clone RP23-435H13 on chromosome X, complete
            sequence
          Length = 179648

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 58   gaaaacacaaaagaaataaa 77
            ||||||||||||||||||||
Sbjct: 6063 gaaaacacaaaagaaataaa 6044


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,674,524
Number of Sequences: 3902068
Number of extensions: 2674524
Number of successful extensions: 58018
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 57902
Number of HSP's gapped (non-prelim): 119
length of query: 260
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 238
effective length of database: 17,147,199,772
effective search space: 4081033545736
effective search space used: 4081033545736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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