ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl40g12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL136380.22| Human DNA sequence from clone RP5-882O7 on chro... 46 0.008
2gb|AC004041.1| Homo sapiens chromosome 5, P1 clone 282d12, P1 51... 38 1.9
3ref|XM_738994.1| Plasmodium chabaudi chabaudi hypothetical prote... 38 1.9
4gb|U39742.3| Caenorhabditis elegans cosmid C25F6, complete sequence 38 1.9
5emb|AL392163.8| Human DNA sequence from clone RP11-43M11 on chro... 38 1.9
6emb|AL359178.10| Human DNA sequence from clone RP11-481K24 on ch... 38 1.9
7emb|AL445624.3|HS512L9 Homo sapiens chromosome 9 BAC RP11-512L9,... 38 1.9
8gb|AC005693.3| Arabidopsis thaliana chromosome 2 clone T25N22 ma... 38 1.9
9gb|AC013746.10| Homo sapiens chromosome 8, clone RP11-131P18, co... 38 1.9
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 1.9
11gb|AC016758.7| Homo sapiens BAC clone RP11-535E19 from 2, comple... 38 1.9
12dbj|AP004117.3| Oryza sativa (japonica cultivar-group) genomic D... 38 1.9
13emb|AL928850.5| Mouse DNA sequence from clone RP23-260B13 on chr... 38 1.9
14gb|L46899.1|HUM16DC88Z Homo sapiens (subclone 7_f9 from P1 H16) ... 38 1.9
15gb|AC137004.2| Oryza sativa (japonica cultivar-group) chromosome... 36 7.5
16gb|AC135421.3| Oryza sativa (japonica cultivar-group) chromosome... 36 7.5
17gb|AY811846.1| Schistosoma japonicum SJCHGC04777 protein mRNA, p... 36 7.5
18gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 36 7.5
19emb|CR450831.4| Zebrafish DNA sequence from clone CH211-79O8 in ... 36 7.5
20gb|AC145091.1| Pan troglodytes BAC clone RP43-12F8 from 7, compl... 36 7.5
21gb|AC142292.1| Pan troglodytes BAC clone RP43-185B17 from 7, com... 36 7.5
22emb|AL136145.23| Human DNA sequence from clone RP11-37K18 on chr... 36 7.5
23emb|AL135920.12| Human DNA sequence from clone RP11-514L15 on ch... 36 7.5
24emb|AL133391.5| Human DNA sequence from clone RP11-22C13 on chro... 36 7.5
25gb|AC157764.4| Mus musculus chromosome 3, clone RP24-238B5, comp... 36 7.5
26emb|BX957314.11| Zebrafish DNA sequence from clone CH211-114K5 i... 36 7.5
27gb|AC015689.12| Homo sapiens chromosome 11, clone RP11-23F23, co... 36 7.5
28gb|AC023043.8| Homo sapiens chromosome 18, clone RP11-49I11, com... 36 7.5
29gb|AC113356.2| Homo sapiens chromosome 5 clone CTD-3035P15, comp... 36 7.5
30gb|AF498314.1| Streptococcus infantis strain SK348 ComC (comC), ... 36 7.5
31dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 36 7.5
32gb|AF391285.1|AF391285 Homo sapiens 11p15.5 clone LOH11A, partia... 36 7.5
33gb|AC039057.8|AC039057 Homo sapiens chromosome 15 clone RP11-81G... 36 7.5
34dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 36 7.5
35dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 36 7.5
36gb|AC116628.4| Homo sapiens BAC clone RP11-369F24 from 2, comple... 36 7.5
37gb|AC132153.2| Homo sapiens BAC clone RP11-111G13 from 2, comple... 36 7.5
38gb|AC137549.1| Homo sapiens chromosome 5 clone RP11-159K7, compl... 36 7.5
39gb|AC097371.2| Homo sapiens BAC clone CTD-2210I8 from 2, complet... 36 7.5
40dbj|AP006860.2| Oryza sativa (japonica cultivar-group) genomic D... 36 7.5
41dbj|AP005761.2| Oryza sativa (japonica cultivar-group) genomic D... 36 7.5
42emb|BX072530.5| Zebrafish DNA sequence from clone DKEY-221K19, c... 36 7.5
43gb|AC005508.1|AC005508 Arabidopsis thaliana chromosome I BAC T2P... 36 7.5
44gb|AC111045.7| Mus musculus chromosome 3, clone RP23-457J17, com... 36 7.5
45dbj|AP000775.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 36 7.5
46gb|AC154608.3| Mus musculus BAC clone RP23-334N8 from chromosome... 36 7.5
47gb|AC136500.1| Homo sapiens chromosome 5 clone RP11-56P2, comple... 36 7.5 
>emb|AL136380.22| Human DNA sequence from clone RP5-882O7 on chromosome 1p33-34.2
             Contains the 5' end of the PTCH2 gene for patched homolog
             2 (Drosophila), a ribosomal protein S2 (RPS2) pseudogene,
             the EIF2B3 gene for eukaryotic translation initiation
             factor 2B subunit 3 gamma 58kDa, a chromosome 14 open
             reading frame 18 (C14orf18) pseudogene, a peptidylprolyl
             isomerase A (cyclophilin A) (PPIA) pseudogene, a
             mitochondrial ribosomal protein S17 (MRPS17) pseudogene
             and four CpG islands, complete sequence
          Length = 171656

 Score = 46.1 bits (23), Expect = 0.008
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 26    ataacatagaaaaaacaacacta 48
             |||||||||||||||||||||||
Sbjct: 49699 ataacatagaaaaaacaacacta 49677
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>gb|AC004041.1| Homo sapiens chromosome 5, P1 clone 282d12, P1 5109 (LBNL H16),
             complete sequence
          Length = 75902

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 30    catagaaaaaacaacacta 48
             |||||||||||||||||||
Sbjct: 41873 catagaaaaaacaacacta 41855
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>ref|XM_738994.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000349.03.0)
            partial mRNA
          Length = 4035

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 15   acaaagtttgtataacatagaaa 37
            |||||||||| ||||||||||||
Sbjct: 2757 acaaagtttgcataacatagaaa 2735
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>gb|U39742.3| Caenorhabditis elegans cosmid C25F6, complete sequence
          Length = 44304

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 30    catagaaaaaacaacacta 48
             |||||||||||||||||||
Sbjct: 33688 catagaaaaaacaacacta 33670
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>emb|AL392163.8| Human DNA sequence from clone RP11-43M11 on chromosome 9 Contains part
             of a novel gene (FLJ20375, KIAA1797), complete sequence
          Length = 161103

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 31    atagaaaaaacaacactagtcaa 53
             |||||||||| ||||||||||||
Sbjct: 65138 atagaaaaaaaaacactagtcaa 65116
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>emb|AL359178.10| Human DNA sequence from clone RP11-481K24 on chromosome 13, complete
             sequence
          Length = 86117

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 28    aacatagaaaaaacaacac 46
             |||||||||||||||||||
Sbjct: 54315 aacatagaaaaaacaacac 54333
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>emb|AL445624.3|HS512L9 Homo sapiens chromosome 9 BAC RP11-512L9, complete sequence
          Length = 179526

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 31   atagaaaaaacaacactagtcaa 53
            |||||||||| ||||||||||||
Sbjct: 8211 atagaaaaaaaaacactagtcaa 8233
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>gb|AC005693.3| Arabidopsis thaliana chromosome 2 clone T25N22 map mi310, complete
             sequence
          Length = 80891

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 28    aacatagaaaaaacaacactagt 50
             |||||||| ||||||||||||||
Sbjct: 33413 aacatagagaaaacaacactagt 33391
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>gb|AC013746.10| Homo sapiens chromosome 8, clone RP11-131P18, complete sequence
          Length = 212337

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 30     catagaaaaaacaacacta 48
              |||||||||||||||||||
Sbjct: 105164 catagaaaaaacaacacta 105182
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 32      tagaaaaaacaacactagt 50
               |||||||||||||||||||
Sbjct: 8192393 tagaaaaaacaacactagt 8192411
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>gb|AC016758.7| Homo sapiens BAC clone RP11-535E19 from 2, complete sequence
          Length = 64256

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 25    tataacatagaaaaaacaa 43
             |||||||||||||||||||
Sbjct: 22583 tataacatagaaaaaacaa 22565
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>dbj|AP004117.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1134_F06
          Length = 130968

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 32    tagaaaaaacaacactagt 50
             |||||||||||||||||||
Sbjct: 24539 tagaaaaaacaacactagt 24557
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>emb|AL928850.5| Mouse DNA sequence from clone RP23-260B13 on chromosome 2, complete
              sequence
          Length = 166560

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 30     catagaaaaaacaacacta 48
              |||||||||||||||||||
Sbjct: 116645 catagaaaaaacaacacta 116627
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>gb|L46899.1|HUM16DC88Z Homo sapiens (subclone 7_f9 from P1 H16) DNA sequence
          Length = 4421

 Score = 38.2 bits (19), Expect = 1.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 30   catagaaaaaacaacacta 48
            |||||||||||||||||||
Sbjct: 2422 catagaaaaaacaacacta 2404
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>gb|AC137004.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0615D12,
              complete sequence
          Length = 155402

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 23     tgtataacatagaaaaaacaac 44
              ||||||| ||||||||||||||
Sbjct: 153002 tgtataatatagaaaaaacaac 153023
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>gb|AC135421.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0012G21, complete sequence
          Length = 135750

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 23    tgtataacatagaaaaaacaac 44
             ||||||| ||||||||||||||
Sbjct: 14235 tgtataatatagaaaaaacaac 14256
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>gb|AY811846.1| Schistosoma japonicum SJCHGC04777 protein mRNA, partial cds
          Length = 927

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                 
Query: 29  acatagaaaaaacaacactagt 50
           ||||||||||||||| ||||||
Sbjct: 721 acatagaaaaaacaagactagt 700
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                     
Query: 27      taacatagaaaaaacaacacta 48
               ||||||||| ||||||||||||
Sbjct: 3570640 taacatagataaaacaacacta 3570661
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>emb|CR450831.4| Zebrafish DNA sequence from clone CH211-79O8 in linkage group 11,
             complete sequence
          Length = 190163

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 32    tagaaaaaacaacactag 49
             ||||||||||||||||||
Sbjct: 96757 tagaaaaaacaacactag 96740
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>gb|AC145091.1| Pan troglodytes BAC clone RP43-12F8 from 7, complete sequence
          Length = 175672

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 29    acatagaaaaaacaacac 46
             ||||||||||||||||||
Sbjct: 42817 acatagaaaaaacaacac 42800
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>gb|AC142292.1| Pan troglodytes BAC clone RP43-185B17 from 7, complete sequence
          Length = 205976

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 29    acatagaaaaaacaacac 46
             ||||||||||||||||||
Sbjct: 60182 acatagaaaaaacaacac 60199
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>emb|AL136145.23| Human DNA sequence from clone RP11-37K18 on chromosome 13 Contains a
             tripartite motif-containing 39 (TRIM39, TFP) pseudogene,
             complete sequence
          Length = 83809

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 33    agaaaaaacaacactagt 50
             ||||||||||||||||||
Sbjct: 19423 agaaaaaacaacactagt 19406
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>emb|AL135920.12| Human DNA sequence from clone RP11-514L15 on chromosome Xq27.1-28,
             complete sequence
          Length = 72903

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 31    atagaaaaaacaacacta 48
             ||||||||||||||||||
Sbjct: 35754 atagaaaaaacaacacta 35737
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>emb|AL133391.5| Human DNA sequence from clone RP11-22C13 on chromosome 9q21.31-22.1
             Contains a ribosomal protein S6 (RPS6) pseudogene,
             complete sequence
          Length = 168324

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 35    aaaaaacaacactagtca 52
             ||||||||||||||||||
Sbjct: 40870 aaaaaacaacactagtca 40853
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>gb|AC157764.4| Mus musculus chromosome 3, clone RP24-238B5, complete sequence
          Length = 146564

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 29     acatagaaaaaacaacac 46
              ||||||||||||||||||
Sbjct: 122710 acatagaaaaaacaacac 122693
to top
>emb|BX957314.11| Zebrafish DNA sequence from clone CH211-114K5 in linkage group 16,
             complete sequence
          Length = 90695

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 23    tgtataacatagaaaaaa 40
             ||||||||||||||||||
Sbjct: 17107 tgtataacatagaaaaaa 17124
to top
>gb|AC015689.12| Homo sapiens chromosome 11, clone RP11-23F23, complete sequence
          Length = 182522

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 31    atagaaaaaacaacacta 48
             ||||||||||||||||||
Sbjct: 40255 atagaaaaaacaacacta 40272
to top
>gb|AC023043.8| Homo sapiens chromosome 18, clone RP11-49I11, complete sequence
          Length = 185278

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 23    tgtataacatagaaaaaa 40
             ||||||||||||||||||
Sbjct: 71575 tgtataacatagaaaaaa 71592
to top
>gb|AC113356.2| Homo sapiens chromosome 5 clone CTD-3035P15, complete sequence
          Length = 30365

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 26    ataacatagaaaaaacaa 43
             ||||||||||||||||||
Sbjct: 22412 ataacatagaaaaaacaa 22429
to top
>gb|AF498314.1| Streptococcus infantis strain SK348 ComC (comC), histidine kinase
           ComD (comD), and response regulator ComE (comE) genes,
           complete cds
          Length = 2382

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 22  ttgtataacatagaaaaa 39
           ||||||||||||||||||
Sbjct: 428 ttgtataacatagaaaaa 411
to top
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020
          Length = 1824958

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 25     tataacatagaaaaaacaacac 46
              ||||||||||||||| ||||||
Sbjct: 353419 tataacatagaaaaagcaacac 353398
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>gb|AF391285.1|AF391285 Homo sapiens 11p15.5 clone LOH11A, partial sequence
          Length = 160199

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 31    atagaaaaaacaacacta 48
             ||||||||||||||||||
Sbjct: 50730 atagaaaaaacaacacta 50747
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>gb|AC039057.8|AC039057 Homo sapiens chromosome 15 clone RP11-81G24 map 15q21.3, complete
             sequence
          Length = 174672

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 32    tagaaaaaacaacactag 49
             ||||||||||||||||||
Sbjct: 47676 tagaaaaaacaacactag 47693
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 25       tataacatagaaaaaaca 42
                ||||||||||||||||||
Sbjct: 10518758 tataacatagaaaaaaca 10518775
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                      
Query: 23       tgtataacatagaaaaaacaac 44
                ||||||| ||||||||||||||
Sbjct: 21761826 tgtataatatagaaaaaacaac 21761847
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>gb|AC116628.4| Homo sapiens BAC clone RP11-369F24 from 2, complete sequence
          Length = 107755

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 31    atagaaaaaacaacacta 48
             ||||||||||||||||||
Sbjct: 11945 atagaaaaaacaacacta 11928
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>gb|AC132153.2| Homo sapiens BAC clone RP11-111G13 from 2, complete sequence
          Length = 154924

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 31    atagaaaaaacaacacta 48
             ||||||||||||||||||
Sbjct: 31990 atagaaaaaacaacacta 32007
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>gb|AC137549.1| Homo sapiens chromosome 5 clone RP11-159K7, complete sequence
          Length = 138494

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 26    ataacatagaaaaaacaa 43
             ||||||||||||||||||
Sbjct: 24120 ataacatagaaaaaacaa 24137
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>gb|AC097371.2| Homo sapiens BAC clone CTD-2210I8 from 2, complete sequence
          Length = 16874

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 31   atagaaaaaacaacacta 48
            ||||||||||||||||||
Sbjct: 2936 atagaaaaaacaacacta 2953
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>dbj|AP006860.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1026E06
          Length = 162784

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 25    tataacatagaaaaaaca 42
             ||||||||||||||||||
Sbjct: 95372 tataacatagaaaaaaca 95389
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>dbj|AP005761.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1066D09
          Length = 183999

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 25    tataacatagaaaaaaca 42
             ||||||||||||||||||
Sbjct: 55465 tataacatagaaaaaaca 55482
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>emb|BX072530.5| Zebrafish DNA sequence from clone DKEY-221K19, complete sequence
          Length = 167009

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 16    caaagtttgtataacata 33
             ||||||||||||||||||
Sbjct: 92627 caaagtttgtataacata 92644
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>gb|AC005508.1|AC005508 Arabidopsis thaliana chromosome I BAC T2P11 genomic sequence, complete
             sequence
          Length = 85372

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 22    ttgtataacatagaaaaaacaa 43
             |||||||||||| |||||||||
Sbjct: 39608 ttgtataacatataaaaaacaa 39629
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>gb|AC111045.7| Mus musculus chromosome 3, clone RP23-457J17, complete sequence
          Length = 172660

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 29     acatagaaaaaacaacac 46
              ||||||||||||||||||
Sbjct: 160440 acatagaaaaaacaacac 160457
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>dbj|AP000775.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-708B6, complete
              sequence
          Length = 189955

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 26     ataacatagaaaaaacaa 43
              ||||||||||||||||||
Sbjct: 166349 ataacatagaaaaaacaa 166366
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>gb|AC154608.3| Mus musculus BAC clone RP23-334N8 from chromosome 16, complete sequence
          Length = 212928

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 25    tataacatagaaaaaaca 42
             ||||||||||||||||||
Sbjct: 98031 tataacatagaaaaaaca 98014
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>gb|AC136500.1| Homo sapiens chromosome 5 clone RP11-56P2, complete sequence
          Length = 183967

 Score = 36.2 bits (18), Expect = 7.5
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 26     ataacatagaaaaaacaa 43
              ||||||||||||||||||
Sbjct: 167542 ataacatagaaaaaacaa 167559


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 675,142
Number of Sequences: 3902068
Number of extensions: 675142
Number of successful extensions: 178769
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 178355
Number of HSP's gapped (non-prelim): 414
length of query: 54
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 34
effective length of database: 17,155,003,908
effective search space: 583270132872
effective search space used: 583270132872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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