ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl40g10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|BX294392.3| Zebrafish DNA sequence from clone CH211-262O24 i... 44 0.079
2emb|AL929188.6| Zebrafish DNA sequence from clone CH211-273O6 in... 44 0.079
3gb|AC118594.6| Mus musculus chromosome 1, clone RP24-479J20, com... 42 0.31
4gb|AC140783.4| Mus musculus BAC clone RP24-253K16 from chromosom... 42 0.31
5gb|AC137905.8| Mus musculus chromosome 15, clone RP23-334B11, co... 42 0.31
6emb|AL672176.10| Zebrafish DNA sequence from clone BUSM1-12F11 i... 42 0.31
7gb|AC108163.3| Homo sapiens BAC clone RP11-694K14 from 4, comple... 42 0.31
8gb|AC022313.5| Homo sapiens BAC clone RP11-437G1 from 4, complet... 42 0.31
9gb|AE001439.1| Helicobacter pylori J99, complete genome 42 0.31
10emb|AL646048.22| Mouse DNA sequence from clone RP23-289C5 on chr... 42 0.31
11gb|AC003676.1| Homo sapiens chromosome 2, P1 clone 777H5 (LBNL H... 40 1.2
12gb|AC103405.14| Mus musculus chromosome 19, clone RP23-98J4, com... 40 1.2
13ref|XM_569280.1| Cryptococcus neoformans var. neoformans JEC21 A... 40 1.2
14gb|AC102582.9| Mus musculus chromosome 9, clone RP23-312A24, com... 40 1.2
15emb|AL139406.14| Human DNA sequence from clone RP11-425M17 on ch... 40 1.2
16emb|AL121902.13|HSBA80K6 Human DNA sequence from clone RP11-80K6... 40 1.2
17emb|CR550302.15| Zebrafish DNA sequence from clone DKEY-145I3 in... 40 1.2
18emb|BX957333.8| Zebrafish DNA sequence from clone CH211-10M5 in ... 40 1.2
19gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 1.2
20ref|XM_625627.1| Cryptosporidium parvum Iowa II hypothetical pro... 40 1.2
21emb|BX248517.10| Zebrafish DNA sequence from clone DKEY-30O16 in... 40 1.2
22gb|AC148663.1| Macaca mulatta Major Histocompatibility Complex B... 40 1.2
23gb|AC148661.1| Macaca mulatta Major Histocompatibility Complex B... 40 1.2
24gb|AC104599.4| Homo sapiens BAC clone RP11-652K9 from 2, complet... 40 1.2
25gb|AC079895.7| Homo sapiens BAC clone RP11-749M12 from 2, comple... 40 1.2
26emb|AL133246.3|CNS01DUJ BAC sequence from the SPG4 candidate reg... 40 1.2
27dbj|AP000485.5| Homo sapiens genomic DNA, chromosome 11, clone:C... 40 1.2
28dbj|AP001157.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 1.2
29gb|AC116121.8| Mus musculus chromosome 8, clone RP23-79K4, compl... 38 4.9
30gb|AC166050.3| Mus musculus BAC clone RP24-138A17 from chromosom... 38 4.9
31gb|AC115930.10| Mus musculus chromosome 3, clone RP24-534H10, co... 38 4.9
32gb|AC005601.1| Homo sapiens chromosome 5, BAC clone 343g16 (LBNL... 38 4.9
33gb|AC167244.2| Mus musculus BAC clone RP24-84C23 from chromosome... 38 4.9
34ref|XM_896634.2| PREDICTED: Mus musculus BAT2 domain containing ... 38 4.9
35ref|XM_924904.2| PREDICTED: Mus musculus BAT2 domain containing ... 38 4.9
36gb|AC146275.2| Pan troglodytes BAC clone RP43-30A5 from 7, compl... 38 4.9
37emb|Z77659.1|CEF23B12 Caenorhabditis elegans Cosmid F23B12, comp... 38 4.9
38emb|CR388406.7| Zebrafish DNA sequence from clone CH211-288H2 in... 38 4.9
39gb|AY436590.1| Homo sapiens nuclear receptor subfamily 3, group ... 38 4.9
40gb|AC103939.8| Mus musculus chromosome 18, clone RP23-300E7, com... 38 4.9
41emb|AL391058.25| Human DNA sequence from clone RP11-512F24 on ch... 38 4.9
42emb|AL157817.13| Human DNA sequence from clone RP11-457D13 on ch... 38 4.9
43emb|AL713962.14| Mouse DNA sequence from clone RP23-3D5 on chrom... 38 4.9
44gb|AC091925.3| Homo sapiens chromosome 5 clone RP11-278J6, compl... 38 4.9
45gb|AC087507.7| Homo sapiens chromosome 18, clone RP11-748I20, co... 38 4.9
46gb|AC007267.5| Arabidopsis thaliana chromosome 2 clone F27O10 ma... 38 4.9
47dbj|AK135245.1| Mus musculus 12 days embryo male wolffian duct i... 38 4.9
48gb|AC020918.6| Homo sapiens chromosome 5 clone CTD-2020C3, compl... 38 4.9
49gb|AC012634.8| Homo sapiens chromosome 5 clone CTD-2185H17, comp... 38 4.9
50emb|BX572621.7| Zebrafish DNA sequence from clone DKEY-34B22 in ... 38 4.9
51gb|AC008782.6|AC008782 Homo sapiens chromosome 5 clone CTD-2026D... 38 4.9
52gb|AC016608.5|AC016608 Homo sapiens chromosome 5 clone CTD-2170F... 38 4.9
53gb|AC023754.3|AC023754 Arabidopsis thaliana chromosome I BAC F1B... 38 4.9
54gb|AE000783.1| Borrelia burgdorferi B31, complete genome 38 4.9
55gb|AC006434.5|AC006434 Genomic sequence for Arabidopsis thaliana... 38 4.9
56gb|AC164651.3| Ornithorhynchus anatinus BAC clone OABb-375A1 fro... 38 4.9
57emb|AL935272.17| Zebrafish DNA sequence from clone CH211-266K22,... 38 4.9
58emb|CT737354.2| Human DNA sequence from clone XX-HCC1954_39C20, ... 38 4.9
59gb|AC104892.10| Mus musculus chromosome 18, clone RP23-262H4, co... 38 4.9
60emb|AL669881.19| Mouse DNA sequence from clone RP23-161I3 on chr... 38 4.9
61emb|AL032628.1|CEY38H6A Caenorhabditis elegans YAC Y38H6A, compl... 38 4.9
62gb|AC118643.6| Mus musculus chromosome 1, clone RP24-113H21, com... 38 4.9
63emb|CT025678.6| Mouse DNA sequence from clone RP24-153A6 on chro... 38 4.9
64gb|AC162442.19| Mus musculus chromosome 1, clone RP24-178O17, co... 38 4.9 
>emb|BX294392.3| Zebrafish DNA sequence from clone CH211-262O24 in linkage group 23,
             complete sequence
          Length = 141252

 Score = 44.1 bits (22), Expect = 0.079
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 32    aaaatctgttttacacatgcca 53
             ||||||||||||||||||||||
Sbjct: 93181 aaaatctgttttacacatgcca 93160
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>emb|AL929188.6| Zebrafish DNA sequence from clone CH211-273O6 in linkage group 23,
              complete sequence
          Length = 150865

 Score = 44.1 bits (22), Expect = 0.079
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 32     aaaatctgttttacacatgcca 53
              ||||||||||||||||||||||
Sbjct: 122585 aaaatctgttttacacatgcca 122564
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>gb|AC118594.6| Mus musculus chromosome 1, clone RP24-479J20, complete sequence
          Length = 209825

 Score = 42.1 bits (21), Expect = 0.31
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 23     acaaaaacaaaaatctgtttt 43
              |||||||||||||||||||||
Sbjct: 159812 acaaaaacaaaaatctgtttt 159792
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>gb|AC140783.4| Mus musculus BAC clone RP24-253K16 from chromosome 15, complete
             sequence
          Length = 165903

 Score = 42.1 bits (21), Expect = 0.31
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 25    aaaaacaaaaatctgttttac 45
             |||||||||||||||||||||
Sbjct: 88392 aaaaacaaaaatctgttttac 88412
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>gb|AC137905.8| Mus musculus chromosome 15, clone RP23-334B11, complete sequence
          Length = 210548

 Score = 42.1 bits (21), Expect = 0.31
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 25    aaaaacaaaaatctgttttac 45
             |||||||||||||||||||||
Sbjct: 50849 aaaaacaaaaatctgttttac 50869
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>emb|AL672176.10| Zebrafish DNA sequence from clone BUSM1-12F11 in linkage group 19
             Contains the 3' part of the rxrb gene for retinoid x
             receptor beta, a novel gene, the col11a2 gene for collagen
             type XI alpha-2,  the fabgl gene for FabG
             (beta-ketoacyl-[acyl-carrier-protein] reductase, E. coli)
             like, and the 3' part of the brd2 gene for
             bromodomain-containing protein 2, complete sequence
          Length = 100037

 Score = 42.1 bits (21), Expect = 0.31
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 25    aaaaacaaaaatctgttttacacatgcca 53
             ||||| |||||||||||||| ||||||||
Sbjct: 39439 aaaaaaaaaaatctgttttagacatgcca 39411
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>gb|AC108163.3| Homo sapiens BAC clone RP11-694K14 from 4, complete sequence
          Length = 95304

 Score = 42.1 bits (21), Expect = 0.31
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 65    aagttctttggggaaaaacctccct 89
             ||||||||| |||||||||||||||
Sbjct: 13951 aagttcttttgggaaaaacctccct 13975
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>gb|AC022313.5| Homo sapiens BAC clone RP11-437G1 from 4, complete sequence
          Length = 183516

 Score = 42.1 bits (21), Expect = 0.31
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 23    acaaaaacaaaaatctgtttt 43
             |||||||||||||||||||||
Sbjct: 85075 acaaaaacaaaaatctgtttt 85055
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>gb|AE001439.1| Helicobacter pylori J99, complete genome
          Length = 1643831

 Score = 42.1 bits (21), Expect = 0.31
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 22      cacaaaaacaaaaatctgttt 42
               |||||||||||||||||||||
Sbjct: 1395945 cacaaaaacaaaaatctgttt 1395925
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>emb|AL646048.22| Mouse DNA sequence from clone RP23-289C5 on chromosome X, complete
            sequence
          Length = 114787

 Score = 42.1 bits (21), Expect = 0.31
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 23   acaaaaacaaaaatctgtttt 43
            |||||||||||||||||||||
Sbjct: 2637 acaaaaacaaaaatctgtttt 2617
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>gb|AC003676.1| Homo sapiens chromosome 2, P1 clone 777H5 (LBNL H27), complete sequence
          Length = 86894

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    ccctcaatagccaaaaacaa 105
             ||||||||||||||||||||
Sbjct: 52110 ccctcaatagccaaaaacaa 52129
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>gb|AC103405.14| Mus musculus chromosome 19, clone RP23-98J4, complete sequence
          Length = 227074

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    caaaaacaaaaatctgtttt 43
             ||||||||||||||||||||
Sbjct: 47373 caaaaacaaaaatctgtttt 47354
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>ref|XM_569280.1| Cryptococcus neoformans var. neoformans JEC21 ATP dependent DNA
            helicase (CNB05360) partial mRNA
          Length = 2372

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 47   catgccagtatacttgacaa 66
            ||||||||||||||||||||
Sbjct: 2230 catgccagtatacttgacaa 2211
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>gb|AC102582.9| Mus musculus chromosome 9, clone RP23-312A24, complete sequence
          Length = 190790

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    aaaaacctccctcaatagcc 97
             ||||||||||||||||||||
Sbjct: 56518 aaaaacctccctcaatagcc 56499
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>emb|AL139406.14| Human DNA sequence from clone RP11-425M17 on chromosome 10 Contains the
             5' end of gene FLJ11218, the gene for a novel ab-hydrolase
             associated lipase region domain containing protein
             (LOC142910), a ribosomal protein L7 (RPL7) pseudogene and
             a CpG island, complete sequence
          Length = 184598

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    aagttctttggggaaaaacc 84
             ||||||||||||||||||||
Sbjct: 60155 aagttctttggggaaaaacc 60136
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>emb|AL121902.13|HSBA80K6 Human DNA sequence from clone RP11-80K6 on chromosome 20 Contains a novel
              gene, the RPL36P1 gene for ribosomal protein L36 pseudogene
              1, the 5' end of the gene for a novel protein (FLJ33887)
              and a CpG island, complete sequence
          Length = 170740

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     ggtcacaaaaacaaaaatct 38
              ||||||||||||||||||||
Sbjct: 122907 ggtcacaaaaacaaaaatct 122888
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>emb|CR550302.15| Zebrafish DNA sequence from clone DKEY-145I3 in linkage group 11,
             complete sequence
          Length = 202610

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    aaaaacaaaaatctgtttta 44
             ||||||||||||||||||||
Sbjct: 28251 aaaaacaaaaatctgtttta 28232
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>emb|BX957333.8| Zebrafish DNA sequence from clone CH211-10M5 in linkage group 25,
             complete sequence
          Length = 170161

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    aaaaacaaaaatctgtttta 44
             ||||||||||||||||||||
Sbjct: 55083 aaaaacaaaaatctgtttta 55064
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>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete
               sequence
          Length = 1632307

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 47      catgccagtatacttgacaa 66
               ||||||||||||||||||||
Sbjct: 1516101 catgccagtatacttgacaa 1516120
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>ref|XM_625627.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd4_180),
            partial mRNA
          Length = 4425

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 26   aaaacaaaaatctgttttac 45
            ||||||||||||||||||||
Sbjct: 2606 aaaacaaaaatctgttttac 2625
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>emb|BX248517.10| Zebrafish DNA sequence from clone DKEY-30O16 in linkage group 16,
              complete sequence
          Length = 201353

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     tcacaaaaacaaaaatctgt 40
              ||||||||||||||||||||
Sbjct: 135195 tcacaaaaacaaaaatctgt 135176
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>gb|AC148663.1| Macaca mulatta Major Histocompatibility Complex BAC MMU012K22, complete
             sequence
          Length = 174897

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    acaaaaacaaaaatctgttt 42
             ||||||||||||||||||||
Sbjct: 69591 acaaaaacaaaaatctgttt 69610
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>gb|AC148661.1| Macaca mulatta Major Histocompatibility Complex BAC MMU007H18, complete
             sequence
          Length = 215614

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    acaaaaacaaaaatctgttt 42
             ||||||||||||||||||||
Sbjct: 20939 acaaaaacaaaaatctgttt 20958
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>gb|AC104599.4| Homo sapiens BAC clone RP11-652K9 from 2, complete sequence
          Length = 80146

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    ccctcaatagccaaaaacaa 105
             ||||||||||||||||||||
Sbjct: 66007 ccctcaatagccaaaaacaa 65988
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>gb|AC079895.7| Homo sapiens BAC clone RP11-749M12 from 2, complete sequence
          Length = 149309

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    ccctcaatagccaaaaacaa 105
             ||||||||||||||||||||
Sbjct: 55159 ccctcaatagccaaaaacaa 55140
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>emb|AL133246.3|CNS01DUJ BAC sequence from the SPG4 candidate region at 2p21-2p22 BAC 852C13 of
             library RPCI-11 from chromosome 2 of Homo sapiens (Human)
          Length = 222730

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    gtcacaaaaacaaaaatctg 39
             ||||||||||||||||||||
Sbjct: 18884 gtcacaaaaacaaaaatctg 18865
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>dbj|AP000485.5| Homo sapiens genomic DNA, chromosome 11, clone:CMB9-21L24, complete
             sequence
          Length = 139072

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    aaaaacaaaaatctgtttta 44
             ||||||||||||||||||||
Sbjct: 42391 aaaaacaaaaatctgtttta 42372
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>dbj|AP001157.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-658F2, complete
              sequence
          Length = 200458

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 25     aaaaacaaaaatctgtttta 44
              ||||||||||||||||||||
Sbjct: 187770 aaaaacaaaaatctgtttta 187751
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>gb|AC116121.8| Mus musculus chromosome 8, clone RP23-79K4, complete sequence
          Length = 216001

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 25     aaaaacaaaaatctgtttt 43
              |||||||||||||||||||
Sbjct: 106840 aaaaacaaaaatctgtttt 106858
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>gb|AC166050.3| Mus musculus BAC clone RP24-138A17 from chromosome 9, complete sequence
          Length = 142457

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 62    gacaagttctttggggaaa 80
             |||||||||||||||||||
Sbjct: 11699 gacaagttctttggggaaa 11681
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>gb|AC115930.10| Mus musculus chromosome 3, clone RP24-534H10, complete sequence
          Length = 158041

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 45    cacatgccagtatacttga 63
             |||||||||||||||||||
Sbjct: 10166 cacatgccagtatacttga 10148
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>gb|AC005601.1| Homo sapiens chromosome 5, BAC clone 343g16 (LBNL H180), complete
             sequence
          Length = 38413

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 47    catgccagtatacttgacaagtt 69
             |||||||||||||| ||||||||
Sbjct: 24371 catgccagtatactagacaagtt 24393
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>gb|AC167244.2| Mus musculus BAC clone RP24-84C23 from chromosome 9, complete sequence
          Length = 235852

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 62    gacaagttctttggggaaa 80
             |||||||||||||||||||
Sbjct: 24790 gacaagttctttggggaaa 24808
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>ref|XM_896634.2| PREDICTED: Mus musculus BAT2 domain containing 1, transcript
           variant 3 (Bat2d), mRNA
          Length = 1401

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 22  cacaaaaacaaaaatctgtttta 44
           |||||||| ||||||||||||||
Sbjct: 930 cacaaaaaaaaaaatctgtttta 908
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>ref|XM_924904.2| PREDICTED: Mus musculus BAT2 domain containing 1, transcript
           variant 10 (Bat2d), mRNA
          Length = 1401

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 22  cacaaaaacaaaaatctgtttta 44
           |||||||| ||||||||||||||
Sbjct: 930 cacaaaaaaaaaaatctgtttta 908
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>gb|AC146275.2| Pan troglodytes BAC clone RP43-30A5 from 7, complete sequence
          Length = 179711

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 32    aaaatctgttttacacatg 50
             |||||||||||||||||||
Sbjct: 89805 aaaatctgttttacacatg 89823
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>emb|Z77659.1|CEF23B12 Caenorhabditis elegans Cosmid F23B12, complete sequence
          Length = 27797

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 25   aaaaacaaaaatctgtttt 43
            |||||||||||||||||||
Sbjct: 3693 aaaaacaaaaatctgtttt 3711
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>emb|CR388406.7| Zebrafish DNA sequence from clone CH211-288H2 in linkage group 1,
             complete sequence
          Length = 161800

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 26    aaaacaaaaatctgtttta 44
             |||||||||||||||||||
Sbjct: 52403 aaaacaaaaatctgtttta 52385
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>gb|AY436590.1| Homo sapiens nuclear receptor subfamily 3, group C, member 1
             (glucocorticoid receptor) (NR3C1) gene, complete cds
          Length = 127687

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 47    catgccagtatacttgacaagtt 69
             |||||||||||||| ||||||||
Sbjct: 82458 catgccagtatactagacaagtt 82436
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>gb|AC103939.8| Mus musculus chromosome 18, clone RP23-300E7, complete sequence
          Length = 240406

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 23     acaaaaacaaaaatctgttttac 45
              |||||||||||||| ||||||||
Sbjct: 205111 acaaaaacaaaaatgtgttttac 205133
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>emb|AL391058.25| Human DNA sequence from clone RP11-512F24 on chromosome 1 Contains part
             of the gene for membrane-associated guanylate
             kinase-related 3 (MAGI-3) and a heterogeneous nuclear
             ribonucleoprotein A3 (hnRNPA3) pseudogene, complete
             sequence
          Length = 82483

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 90    caatagccaaaaacaaagt 108
             |||||||||||||||||||
Sbjct: 19275 caatagccaaaaacaaagt 19257
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>emb|AL157817.13| Human DNA sequence from clone RP11-457D13 on chromosome 13q14.2-21.1
             Contains a 60S ribosomal protein 5 (RPL5) pseudogene, a
             novel gene and a CpG island, complete sequence
          Length = 176148

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 88    ctcaatagccaaaaacaaa 106
             |||||||||||||||||||
Sbjct: 11528 ctcaatagccaaaaacaaa 11546
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>emb|AL713962.14| Mouse DNA sequence from clone RP23-3D5 on chromosome 11, complete
              sequence
          Length = 230198

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 23     acaaaaacaaaaatctgtt 41
              |||||||||||||||||||
Sbjct: 213396 acaaaaacaaaaatctgtt 213378
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>gb|AC091925.3| Homo sapiens chromosome 5 clone RP11-278J6, complete sequence
          Length = 164668

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 47    catgccagtatacttgacaagtt 69
             |||||||||||||| ||||||||
Sbjct: 40627 catgccagtatactagacaagtt 40649
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>gb|AC087507.7| Homo sapiens chromosome 18, clone RP11-748I20, complete sequence
          Length = 129457

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 25    aaaaacaaaaatctgtttt 43
             |||||||||||||||||||
Sbjct: 71476 aaaaacaaaaatctgtttt 71494
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>gb|AC007267.5| Arabidopsis thaliana chromosome 2 clone F27O10 map mi398, complete
             sequence
          Length = 55686

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    gtcacaaaaacaaaaatct 38
             |||||||||||||||||||
Sbjct: 51682 gtcacaaaaacaaaaatct 51700
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>dbj|AK135245.1| Mus musculus 12 days embryo male wolffian duct includes surrounding
           region cDNA, RIKEN full-length enriched library,
           clone:6720444G20 product:hypothetical BAT2, N-terminal
           containing protein, full insert sequence
          Length = 1343

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 22  cacaaaaacaaaaatctgtttta 44
           |||||||| ||||||||||||||
Sbjct: 872 cacaaaaaaaaaaatctgtttta 850
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>gb|AC020918.6| Homo sapiens chromosome 5 clone CTD-2020C3, complete sequence
          Length = 175425

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 25    aaaaacaaaaatctgtttt 43
             |||||||||||||||||||
Sbjct: 23675 aaaaacaaaaatctgtttt 23657
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>gb|AC012634.8| Homo sapiens chromosome 5 clone CTD-2185H17, complete sequence
          Length = 237712

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 47    catgccagtatacttgacaagtt 69
             |||||||||||||| ||||||||
Sbjct: 60303 catgccagtatactagacaagtt 60281
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>emb|BX572621.7| Zebrafish DNA sequence from clone DKEY-34B22 in linkage group 5, complete
              sequence
          Length = 196336

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 25     aaaaacaaaaatctgtttt 43
              |||||||||||||||||||
Sbjct: 192063 aaaaacaaaaatctgtttt 192045
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>gb|AC008782.6|AC008782 Homo sapiens chromosome 5 clone CTD-2026D23, complete sequence
          Length = 167275

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 25    aaaaacaaaaatctgtttt 43
             |||||||||||||||||||
Sbjct: 58124 aaaaacaaaaatctgtttt 58142
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>gb|AC016608.5|AC016608 Homo sapiens chromosome 5 clone CTD-2170F21, complete sequence
          Length = 113626

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 25     aaaaacaaaaatctgtttt 43
              |||||||||||||||||||
Sbjct: 107061 aaaaacaaaaatctgtttt 107079
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>gb|AC023754.3|AC023754 Arabidopsis thaliana chromosome I BAC F1B16 genomic sequence,
            complete sequence
          Length = 100685

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 23   acaaaaacaaaaatctgtt 41
            |||||||||||||||||||
Sbjct: 5643 acaaaaacaaaaatctgtt 5625
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>gb|AE000783.1| Borrelia burgdorferi B31, complete genome
          Length = 910724

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 25     aaaaacaaaaatctgtttt 43
              |||||||||||||||||||
Sbjct: 125365 aaaaacaaaaatctgtttt 125383
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>gb|AC006434.5|AC006434 Genomic sequence for Arabidopsis thaliana BAC F10A5, complete sequence
          Length = 129547

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 23     acaaaaacaaaaatctgtt 41
              |||||||||||||||||||
Sbjct: 103150 acaaaaacaaaaatctgtt 103132
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>gb|AC164651.3| Ornithorhynchus anatinus BAC clone OABb-375A1 from chromosome
            unknown, complete sequence
          Length = 183178

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 9    aactgactcgggtcacaaa 27
            |||||||||||||||||||
Sbjct: 2496 aactgactcgggtcacaaa 2478
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>emb|AL935272.17| Zebrafish DNA sequence from clone CH211-266K22, complete sequence
          Length = 145553

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 23     acaaaaacaaaaatctgttttac 45
              |||||||||||||||| ||||||
Sbjct: 133611 acaaaaacaaaaatcttttttac 133589
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>emb|CT737354.2| Human DNA sequence from clone XX-HCC1954_39C20, complete sequence
          Length = 148559

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 25     aaaaacaaaaatctgtttt 43
              |||||||||||||||||||
Sbjct: 146110 aaaaacaaaaatctgtttt 146092
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>gb|AC104892.10| Mus musculus chromosome 18, clone RP23-262H4, complete sequence
          Length = 190380

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 23    acaaaaacaaaaatctgttttac 45
             |||||||||||||| ||||||||
Sbjct: 19680 acaaaaacaaaaatgtgttttac 19702
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>emb|AL669881.19| Mouse DNA sequence from clone RP23-161I3 on chromosome 11, complete
             sequence
          Length = 143132

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 90    caatagccaaaaacaaagt 108
             |||||||||||||||||||
Sbjct: 39122 caatagccaaaaacaaagt 39104
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>emb|AL032628.1|CEY38H6A Caenorhabditis elegans YAC Y38H6A, complete sequence
          Length = 24222

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 23   acaaaaacaaaaatctgttttacacat 49
            |||||||||| |||| |||||||||||
Sbjct: 3772 acaaaaacaataatcagttttacacat 3746
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>gb|AC118643.6| Mus musculus chromosome 1, clone RP24-113H21, complete sequence
          Length = 184206

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 22     cacaaaaacaaaaatctgtttta 44
              |||||||| ||||||||||||||
Sbjct: 124304 cacaaaaaaaaaaatctgtttta 124282
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>emb|CT025678.6| Mouse DNA sequence from clone RP24-153A6 on chromosome 9, complete
            sequence
          Length = 175790

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 62   gacaagttctttggggaaa 80
            |||||||||||||||||||
Sbjct: 4770 gacaagttctttggggaaa 4752
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>gb|AC162442.19| Mus musculus chromosome 1, clone RP24-178O17, complete sequence
          Length = 201383

 Score = 38.2 bits (19), Expect = 4.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 25    aaaaacaaaaatctgtttt 43
             |||||||||||||||||||
Sbjct: 43546 aaaaacaaaaatctgtttt 43528


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,394,410
Number of Sequences: 3902068
Number of extensions: 2394410
Number of successful extensions: 294141
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 293848
Number of HSP's gapped (non-prelim): 293
length of query: 108
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 87
effective length of database: 17,151,101,840
effective search space: 1492145860080
effective search space used: 1492145860080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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