>ENV_CAEVG (P31627) Env polyprotein precursor (Coat polyprotein) [Contains:|
           Leader peptide; Surface protein; Transmembrane protein]
          Length = 942

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 77  KSEIRIGTTETIVQICNSHHWYSCNCCW*GWTLYNKRT 190
           +  I +   +TI   C+  +W  CNC   G  LYN  T
Sbjct: 433 RHNITVDRNQTITGNCSVTNWDGCNCSRSGNYLYNSTT 470


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,276,759
Number of Sequences: 219361
Number of extensions: 248472
Number of successful extensions: 756
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 80,573,946
effective HSP length: 44
effective length of database: 70,922,062
effective search space used: 1702129488
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)