Clone Name | rbastl40g07 |
---|---|
Clone Library Name | barley_pub |
>gb|AC122903.4| Mus musculus BAC clone RP23-44N5 from chromosome 1, complete sequence Length = 169832 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Minus Query: 127 tagtcatcactggtactcatgt 148 |||||||||||||||||||||| Sbjct: 8999 tagtcatcactggtactcatgt 8978
>gb|AC159278.3| Mus musculus BAC clone RP23-361M12 from chromosome 1, complete sequence Length = 180181 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Plus Query: 127 tagtcatcactggtactcatgt 148 |||||||||||||||||||||| Sbjct: 50072 tagtcatcactggtactcatgt 50093
>emb|AL928554.24| Mouse DNA sequence from clone RP23-131H7 on chromosome 1, complete sequence Length = 195568 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Minus Query: 127 tagtcatcactggtactcatgt 148 |||||||||||||||||||||| Sbjct: 143718 tagtcatcactggtactcatgt 143697
>gb|AC092588.2| Homo sapiens BAC clone RP11-44A12 from 2, complete sequence Length = 140401 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 acaagaggacgaacattaaa 199 |||||||||||||||||||| Sbjct: 20416 acaagaggacgaacattaaa 20435
>gb|AC097067.3| Homo sapiens BAC clone RP11-558N14 from 4, complete sequence Length = 136500 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 aagttgaataagagattacattag 27 ||||||||||||| |||||||||| Sbjct: 104249 aagttgaataagatattacattag 104226
>ref|XM_687723.1| PREDICTED: Danio rerio Datf1_predicted protein (Datf1_predicted), mRNA Length = 8921 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 tcatttccacagtacactga 51 |||||||||||||||||||| Sbjct: 1594 tcatttccacagtacactga 1575
>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA, complete genome Length = 2516575 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 ttggactctttacaacaaga 185 |||||||||||||||||||| Sbjct: 679102 ttggactctttacaacaaga 679121
>emb|BX296530.7| Zebrafish DNA sequence from clone DKEY-22H2 in linkage group 11, complete sequence Length = 153078 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 tcatttccacagtacactga 51 |||||||||||||||||||| Sbjct: 10598 tcatttccacagtacactga 10617
>emb|AL935195.14| Zebrafish DNA sequence from clone CH211-277C7 in linkage group 14, complete sequence Length = 194053 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 40 acagtacactgaagaaaaactgtt 63 |||||||||||||||| ||||||| Sbjct: 39594 acagtacactgaagaacaactgtt 39571 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,703,787 Number of Sequences: 3902068 Number of extensions: 1703787 Number of successful extensions: 113363 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 113327 Number of HSP's gapped (non-prelim): 36 length of query: 206 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 184 effective length of database: 17,147,199,772 effective search space: 3155084758048 effective search space used: 3155084758048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)